diff --git a/DeepCpG_DNA/Hou2016_HCC_dna/dataloader.yaml b/DeepCpG_DNA/Hou2016_HCC_dna/dataloader.yaml index e3b18d55b..cb7a25bcb 100644 --- a/DeepCpG_DNA/Hou2016_HCC_dna/dataloader.yaml +++ b/DeepCpG_DNA/Hou2016_HCC_dna/dataloader.yaml @@ -12,12 +12,11 @@ args: defined_as: dataloader.py::SeqDataset dependencies: conda: - - bioconda::genomelake==0.1.4 - - bioconda::pybedtools - - python=3.5 - - numpy - - pandas - - cython + - bioconda::genomelake=0.1.4 + - bioconda::pybedtools=0.8.1 + - python=3.6 + - numpy=1.19.2 + - pandas=1.1.3 info: authors: - github: avsecz diff --git a/DeepCpG_DNA/Hou2016_HCC_dna/model.yaml b/DeepCpG_DNA/Hou2016_HCC_dna/model.yaml index 8e85b3096..7a9527e5d 100644 --- a/DeepCpG_DNA/Hou2016_HCC_dna/model.yaml +++ b/DeepCpG_DNA/Hou2016_HCC_dna/model.yaml @@ -11,13 +11,12 @@ args: default_dataloader: . dependencies: conda: - - python=3.5 + - python=3.6 - h5py=2.10.0 - pip=20.2.4 pip: - tensorflow==1.10.0 - keras==1.2.2 - - deepcpg==1.0.4 info: authors: - github: cangermueller