From 204026356259a55bbed710df06d45b2bba0acde0 Mon Sep 17 00:00:00 2001
From: Peter Van Dyken <pvandyk2@uwo.ca>
Date: Thu, 9 May 2024 12:43:08 -0400
Subject: [PATCH] Add test

---
 snakebids/tests/test_app.py | 19 ++++++++++++++++++-
 1 file changed, 18 insertions(+), 1 deletion(-)

diff --git a/snakebids/tests/test_app.py b/snakebids/tests/test_app.py
index 5e8f79c1..eb162b1f 100644
--- a/snakebids/tests/test_app.py
+++ b/snakebids/tests/test_app.py
@@ -40,7 +40,6 @@ def test_arguments_carried_forward(mocker: MockerFixture):
     from snakebids.app import sb_plugins
     from snakebids.bidsapp import run
 
-    mocker.stopall()
     mocker.patch.object(run, "_Runner")
     snakemake = mocker.spy(sb_plugins, "SnakemakeBidsApp")
     SnakeBidsApp(
@@ -55,6 +54,24 @@ def test_arguments_carried_forward(mocker: MockerFixture):
     )
 
 
+def test_str_converted_to_path(mocker: MockerFixture):
+    from snakebids.app import sb_plugins
+    from snakebids.bidsapp import run
+
+    mocker.patch.object(run, "_Runner")
+    snakemake = mocker.spy(sb_plugins, "SnakemakeBidsApp")
+    SnakeBidsApp(
+        "",
+        configfile_path="config",
+        snakefile_path="Snakefile",
+    ).run_snakemake()
+    snakemake.assert_called_once_with(
+        snakemake_dir=Path(),
+        configfile_path=Path("config"),
+        snakefile_path=Path("Snakefile"),
+    )
+
+
 def test_plugins_carried_forward(mocker: MockerFixture):
     from snakebids.app import bidsapp
     from snakebids.bidsapp import run