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rworkflows.yml
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## Adapted from neurogenomics/rworkflows: rworkflows::use_workflow()
name: rworkflows
'on':
push:
branches:
- devel
- RELEASE_**
pull_request:
branches:
- devel
- RELEASE_**
jobs:
rworkflows:
runs-on: ${{ matrix.config.os }}
name: ${{ matrix.config.os }} (${{ matrix.config.r }})
container: ${{ matrix.config.cont }}
strategy:
fail-fast: ${{ false }}
matrix:
config:
- os: ubuntu-latest
bioc: devel
r: auto
cont: ghcr.io/bioconductor/bioconductor:devel
rspm: https://packagemanager.rstudio.com/cran/__linux__/focal/release
steps:
- uses: neurogenomics/rworkflows@master
with:
run_bioccheck: ${{ false }}
run_rcmdcheck: ${{ true }}
as_cran: ${{ false }}
run_vignettes: ${{ false }}
has_testthat: ${{ true }}
run_covr: ${{ false }}
run_pkgdown: ${{ false }}
has_runit: ${{ false }}
has_latex: ${{ false }}
GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
run_docker: ${{ false }}
runner_os: ${{ runner.os }}
cache_version: cache-v1