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version.xml
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version.xml
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<package name='gammaspike' version='0.0.3'>
<depends on='BEAST.base' atleast='2.7.5'/>
<depends on='SA' atleast='2.1.1'/>
<service type="beast.base.core.BEASTInterface">
<provider classname="gammaspike.clockmodel.PunctuatedClockModel"/>
<provider classname="gammaspike.clockmodel.PunctuatedRelaxedClockModel"/>
<provider classname="gammaspike.clockmodel.SpikeSize"/>
<provider classname="gammaspike.distribution.StumpedTreePrior"/>
<provider classname="gammaspike.distribution.StumpedTreePriorOneLineage"/>
<provider classname="gammaspike.distribution.TreeFlabelLikelihood"/>
<provider classname="gammaspike.distribution.BranchSpikePrior"/>
<provider classname="gammaspike.distribution.BranchRatePrior"/>
<provider classname="gammaspike.distribution.BinomialPrior"/>
<provider classname="gammaspike.flabel.Flabel"/>
<provider classname="gammaspike.flabel.FlabelData"/>
<provider classname="gammaspike.logger.StumpedTreeLogger"/>
<provider classname="gammaspike.logger.TaxonCountLogger"/>
<provider classname="gammaspike.logger.SaltativeProportionLogger"/>
<provider classname="gammaspike.operator.StubCreator"/>
<provider classname="gammaspike.operator.StubGibbsOperatorSingleLineage"/>
<provider classname="gammaspike.operator.StumpedTreeScaler"/>
<provider classname="gammaspike.operator.StubSwapOperator"/>
<provider classname="gammaspike.operator.StubBranchOperator"/>
<provider classname="gammaspike.operator.StumpedTreeExchange"/>
<provider classname="gammaspike.operator.StumpedTreeUniform"/>
<provider classname="gammaspike.operator.MultinomialSampler"/>
<provider classname="gammaspike.operator.StumpedTreeConstantDistanceOperator"/>
<provider classname="gammaspike.operator.SpikeUpRateDown"/>
<provider classname="gammaspike.operator.StubbedNodeDateRandomWalker"/>
<provider classname="gammaspike.operator.StubbedLeafToSampledAncestorJump"/>
<provider classname="gammaspike.operator.StubTreeStretchOperator"/>
<provider classname="gammaspike.operator.StubEpochFlexOperator"/>
<provider classname="gammaspike.tree.ForwardTimeSimulatorResub"/>
<provider classname="gammaspike.tree.BirthDeathStubSimulator"/>
<provider classname="gammaspike.tree.Stubs"/>
<provider classname="gammaspike.tree.LabelledTreeInitialiser"/>
</service>
</package>