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config.yaml
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bucket : Hoof2Heart
THREADS :
STAR : 30
SALMON : 2
GCF_002863925.1_EquCab3.0 :
resource : NCBI
release : GCF_002863925.1_EquCab3.0
fasta : ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Equus_caballus/all_assembly_versions/GCF_002863925.1_EquCab3.0/GCF_002863925.1_EquCab3.0_genomic.fna.gz
gff : ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Equus_caballus/all_assembly_versions/GCF_002863925.1_EquCab3.0/GCF_002863925.1_EquCab3.0_genomic.gff.gz
gtf : ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Equus_caballus/all_assembly_versions/GCF_002863925.1_EquCab3.0/GCF_002863925.1_EquCab3.0_genomic.gtf.gz
Equus_caballus.EquCab3.0.103 :
resource : Ensembl
release : Equus_caballus.EquCab3.0.103
fasta : ftp://ftp.ensembl.org/pub/release-103/fasta/equus_caballus/dna/Equus_caballus.EquCab3.0.dna.toplevel.fa.gz
gff : ftp://ftp.ensembl.org/pub/release-103/gff3/equus_caballus/Equus_caballus.EquCab3.0.103.gff3.gz
gtf : ftp://ftp.ensembl.org/pub/release-103/gtf/equus_caballus/Equus_caballus.EquCab3.0.103.gtf.gz