NAMESPACE

S3method("[", "normalizedMatrix")
export("[.normalizedMatrix")
S3method("print", "normalizedMatrix")
export("print.normalizedMatrix")
S3method("rbind", "normalizedMatrix")
export("rbind.normalizedMatrix")
export("EnrichedHeatmap")
export("anno_enriched")
export("as.normalizedMatrix")
export("copyAttr")
export("default_smooth_fun")
export("discretize")
export("dist_by_closeness")
export("enriched_score")
export("extract_anno_enriched")
export("failed_rows")
export("getSignalsFromList")
export("makeWindows")
export("normalizeToMatrix")

import(ComplexHeatmap)
import(GenomicRanges)
import(IRanges)
import(Rcpp)
import(grid)
import(locfit)
import(methods)
importFrom("GetoptLong", qq.options)
importFrom("GetoptLong", qqcat)
importFrom("circlize", colorRamp2)
importFrom("grDevices", "col2rgb", "rgb")
importFrom("matrixStats", colSds)
importFrom("stats", "loess.control", "predict", loess, as.dist)
importFrom("utils", "packageDescription")
useDynLib(EnrichedHeatmap, .fixes = "EnrichedHeatmap_", .registration=TRUE)