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hapmap_to_qtl2

Convert HapMap file into a useable R qtl2 genotype file

usage: hapmap_to_qtl2.py [-h] --hapmap HAPMAP [--output OUTPUT]

This script was designed to convert a hapmap file into R qtl2 format.

optional arguments:
    -h, --help       show this help message and exit
    --output OUTPUT  File name for qtl2 output.

required arguments:
    --hapmap HAPMAP  The name of the input hapmap file.