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reads fasta file not accepted? #3

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jianshu93 opened this issue Nov 15, 2020 · 1 comment
Open

reads fasta file not accepted? #3

jianshu93 opened this issue Nov 15, 2020 · 1 comment

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@jianshu93
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fa.gz file are not readable for MetaPrism_gene.pl, any possibility to add support for fasta format?

Jianshu
@jiwoongbio
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The reads in input FASTQ files are mapped on the genome/assembly sequence using BWA internally. Logically FASTA files must work because BWA allows FASTA input. Can you share the error statement you got when you input FASTA input?

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@jiwoongbio @jianshu93