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Handle multi-allelic vcf with alternative alleles separated per row (i.e. generated via bcftools norm -m - #35

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jeffersonfparil opened this issue Dec 4, 2024 · 0 comments

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@jeffersonfparil
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Since we have to convert all other formats into sync which we can properly handle multi-allelic loci, then let's just handle multi-allelic vcfs and properly convert them into syncs. This is instead of our current error message telling users to remove multi-row multi-allelic loci.

@jeffersonfparil jeffersonfparil changed the title Handle multi-allelic vcf with alternative alleles separated per row (i.e. generated via norm -m - Handle multi-allelic vcf with alternative alleles separated per row (i.e. generated via bcftools norm -m - Dec 4, 2024
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