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Since we have to convert all other formats into sync which we can properly handle multi-allelic loci, then let's just handle multi-allelic vcfs and properly convert them into syncs. This is instead of our current error message telling users to remove multi-row multi-allelic loci.
The text was updated successfully, but these errors were encountered:
jeffersonfparil
changed the title
Handle multi-allelic vcf with alternative alleles separated per row (i.e. generated via norm -m -
Handle multi-allelic vcf with alternative alleles separated per row (i.e. generated via bcftools norm -m -Dec 4, 2024
Since we have to convert all other formats into sync which we can properly handle multi-allelic loci, then let's just handle multi-allelic vcfs and properly convert them into syncs. This is instead of our current error message telling users to remove multi-row multi-allelic loci.
The text was updated successfully, but these errors were encountered: