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Creating jupyter_r conda environment has some issues #1

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jantonisito opened this issue Dec 14, 2016 · 2 comments
Open

Creating jupyter_r conda environment has some issues #1

jantonisito opened this issue Dec 14, 2016 · 2 comments

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@jantonisito
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I tried to run:
conda create -n jupyter_r -c r r-irkernel r-essentials r-recommended rpy2 -y
it almost went through but it reported following issue:
Linking packages ...
'mingw-w64\bin\p11-kit.exe' is not recognized as an internal or external command,
operable program or batch file.
.....
The system cannot find the path specified.

That is slightly surprising because that binary is there:
C:\Users\IBM_ADMIN\Miniconda2\pkgs\m2w64-p11-kit-0.23.2-1\Library\mingw-w64\bin\p11-kit.exe

Sorry if this is trivial issue - I just started on Python.

@jantonisito
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After installing r-essentials through conda:
conda install -c r r-essentials
and then removing jupyter_r (not sure if that was necessary but I did not find a way to rebuild environment that already exists):
conda remove --name jupyter_r --all
and creating jupyter_r again:
conda create -n jupyter_r -c r r-irkernel r-essentials r-recommended rpy2 -y
I was able to open Pure R notebook and it would load R kernel.

@jantonisito
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However rpy2 example does not work:
import rpy2

ImportError Traceback (most recent call last)
in ()
----> 1 import rpy2

ImportError: No module named rpy2

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