Entrez.email

[OP-0]

I think there is a missing line in the entrez.py file.

`import sys
from Bio import Entrez
from Bio import SeqIO

params_genbank_ids = sys.argv[1]
params_email = sys.argv[2]
output_reference = sys.argv[3]
output_taxonomy = sys.argv[4]

with open(output_reference, 'w') as refs, open(output_taxonomy, 'w') as taxes:
for genbank_id in params_genbank_ids:
`
... Might have been ...

`import sys
from Bio import Entrez
from Bio import SeqIO

params_genbank_ids = [1]
params_email = sys.argv[2]
output_reference = sys.argv[3]
output_taxonomy = sys.argv[4]

Entrez.email=params_email

with open(output_reference, 'w') as refs, open(output_taxonomy, 'w') as taxes:
for genbank_id in params_genbank_ids:`

... Otherwise it throws off an error:

To make use of NCBI's E=utilities, NCBI requires you to specify your email address with each request...