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Copy pathhistology_config_kevin_test_quick.yaml
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histology_config_kevin_test_quick.yaml
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head:
primer:
analog_inputs:
low: 0
high: 8
channel: 0
quad1:
analog_inputs:
low: 1
high: 9
channel: 1
quad2:
analog_inputs:
low: 2
high: 10
channel: 2
quad3:
analog_inputs:
low: 3
high: 11
channel: 3
quad4:
analog_inputs:
low: 4
high: 12
channel: 4
quad5:
analog_inputs:
low: 5
high: 13
channel: 5
quad6:
analog_inputs:
low: 6
high: 14
channel: 6
system:
channel: 7
manifold:
block:
channel: 9
primary:
channel: 10
pbst:
channel: 13
secondary:
channel: 11
pbs:
channel: 12
aspirate:
channel: 8
seperate:
channel: 20
setup_duration: 20
system_prime_count: 1
prime_duration: 10
prime_aspirate_duration: 15
fill_duration_full: 20
dispense_duration_full: 6
dispense_duration_on: 0.25
dispense_duration_off: 1
chemical_aspirate_duration: 40
chemical_separate_duration: 40
shake_speed_min: &shake_speed_min 200
shake_speed_max: &shake_speed_max 3000
aspirate_shake_speed: 200
separate_shake_speed: 200
inter_dispense_shake_speed: 400
inter_dispense_shake_duration: 10
shake_duration_min: 10
shake_attempts: 2
post_shake_off_duration: 5
adc_sample_count: 11
fill_duration_all_cylinders: 400
fill_duration_one_cylinder: 150
volume_crossover: 6
volume_max: 10
volume_threshold_initial: 1.0
pre_cylinder_fill_duration: 2
post_cylinder_fill_duration: 4
balance_zero_duration: 4
protocol:
- chemical: pbs
prime_count: 1
dispense_volume: 0
shake_speed: 500
shake_duration: 0
post_shake_duration: 0
aspirate: false
repeat: 0
- chemical: block
prime_count: 1
dispense_volume: 6
shake_speed: 500
shake_duration: 10
post_shake_duration: 5
aspirate: true
repeat: 0
- chemical: block
prime_count: 0
dispense_volume: 6
shake_speed: 500
shake_duration: 0
post_shake_duration: 0
aspirate: false
repeat: 0
exclude:
- quad1
- quad3
- quad4
- quad6
- chemical: primary
prime_count: 1
dispense_volume: 6
shake_speed: 500
shake_duration: 10
post_shake_duration: 5
aspirate: true
repeat: 0
exclude:
- quad2
- quad5
- chemical: pbst
prime_count: 1
dispense_volume: 6
shake_speed: 500
shake_duration: 10
post_shake_duration: 5
aspirate: true
repeat: 1
- chemical: block
prime_count: 1
dispense_volume: 6
shake_speed: 500
shake_duration: 0
post_shake_duration: 0
aspirate: false
repeat: 0
exclude:
- quad1
- quad2
- quad4
- quad6
- chemical: secondary
prime_count: 1
dispense_volume: 6
shake_speed: 500
shake_duration: 10
post_shake_duration: 5
aspirate: true
repeat: 0
exclude:
- quad3
- quad5
- chemical: pbs
prime_count: 1
dispense_volume: 6
shake_speed: 500
shake_duration: 10
post_shake_duration: 5
aspirate: true
repeat: 1
- chemical: pbs
prime_count: 0
dispense_volume: 6
shake_speed: 500
shake_duration: 0
post_shake_duration: 30
aspirate: false
repeat: 0