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Schema not rendered in iPython notebook #9

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mbookman opened this issue Feb 11, 2017 · 0 comments
Open

Schema not rendered in iPython notebook #9

mbookman opened this issue Feb 11, 2017 · 0 comments

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@mbookman
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On https://github.com/isb-cgc/examples-Python/blob/master/notebooks/Creating%20TCGA%20cohorts%20--%20part%201.ipynb, there is a call to

%bigquery schema --table isb-cgc:tcga_201607_beta.Clinical_data

which displays no schema details underneath. This is an issue with the rendering code relying on JavaScript and github blocking JavaScript.

I just filed an issue there ("%bigquery schema --table" produces no visible output on github)[https://github.com/googledatalab/pydatalab/issues/184] which includes some python code to replace "bigquery schema" call. This can be used to work around the pydatalab library issue.

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