From 81cb02df1598d40271f43db9295ae5ba319453ea Mon Sep 17 00:00:00 2001 From: GitHub Action Date: Fri, 8 Sep 2023 09:52:08 +0000 Subject: [PATCH] Update documentation --- _autosummary/one.remote.globus.html | 4 ++-- _modules/one/remote/globus.html | 12 ++++++------ searchindex.js | 2 +- 3 files changed, 9 insertions(+), 9 deletions(-) diff --git a/_autosummary/one.remote.globus.html b/_autosummary/one.remote.globus.html index a0616a45..12c51c43 100644 --- a/_autosummary/one.remote.globus.html +++ b/_autosummary/one.remote.globus.html @@ -138,7 +138,7 @@

Setup

In order to use this function you need:

    -

  1. The client ID of an existing Globus Client (`see this tutorial`_).

    2. +

  2. The client ID of an existing Globus Client (see this tutorial).

  3. Set up Global Connect on your local device.

  4. Register your local device as an endpoint in your Globus Client.

@@ -382,7 +382,7 @@

Setup

Setup a Globus client.

In order to use this function you need:

    -

  1. The client ID of an existing Globus Client (`see this tutorial`_).

    2. +

  2. The client ID of an existing Globus Client (see this tutorial).

  3. Set up Global Connect on your local device.

  4. Register your local device as an endpoint in your Globus Client.

diff --git a/_modules/one/remote/globus.html b/_modules/one/remote/globus.html index 68106a8f..43d0cfb1 100644 --- a/_modules/one/remote/globus.html +++ b/_modules/one/remote/globus.html @@ -104,7 +104,7 @@

Source code for one.remote.globus

-r"""A module for handling file operations through the Globus SDK.
+"""A module for handling file operations through the Globus SDK.
 
 Setup
 -----
@@ -115,7 +115,7 @@ 
Source code for one.remote.globus
 
 In order to use this function you need:
 
-1. The client ID of an existing Globus Client (\ `see this tutorial`_).
+1. The client ID of an existing Globus Client (`see this tutorial`_).
 2. Set up `Global Connect`_ on your local device.
 3. Register your local device as an `endpoint`_ in your Globus Client.
 
@@ -135,7 +135,7 @@ 
Source code for one.remote.globus
 >>> print(globus.endpoints.keys())
 >>> print(globus.endpoints['local'])
 
-.. _how to create one: https://globus-sdk-python.readthedocs.io/en/stable/tutorial.html
+.. _see this tutorial: https://globus-sdk-python.readthedocs.io/en/stable/tutorial.html
 .. _Global Connect: https://www.globus.org/globus-connect-personal
 .. _endpoint: https://app.globus.org/
 
@@ -840,16 +840,16 @@ 
Source code for one.remote.globus
 [docs]
     @staticmethod
     def setup(client_name='default', **kwargs):
-        r"""
+        """
         Setup a Globus client.
 
         In order to use this function you need:
 
-        1. The client ID of an existing Globus Client (\ `see this tutorial`_).
+        1. The client ID of an existing Globus Client (`see this tutorial`_).
         2. Set up `Global Connect`_ on your local device.
         3. Register your local device as an `endpoint`_ in your Globus Client.
 
-        .. _how to create one: https://globus-sdk-python.readthedocs.io/en/stable/tutorial.html
+        .. _see this tutorial: https://globus-sdk-python.readthedocs.io/en/stable/tutorial.html
         .. _Global Connect: https://www.globus.org/globus-connect-personal
         .. _endpoint: https://app.globus.org/
 
diff --git a/searchindex.js b/searchindex.js
index 6bcc01d0..4492f243 100644
--- a/searchindex.js
+++ b/searchindex.js
@@ -1 +1 @@
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in one.alf.io)": [[6, "one.alf.io.AlfBunch"]], "append() (alfbunch method)": [[6, "one.alf.io.AlfBunch.append"]], "check_dimensions (alfbunch property)": [[6, "one.alf.io.AlfBunch.check_dimensions"]], "check_dimensions() (in module one.alf.io)": [[6, "one.alf.io.check_dimensions"]], "dataframe() (in module one.alf.io)": [[6, "one.alf.io.dataframe"]], "exists() (in module one.alf.io)": [[6, "one.alf.io.exists"]], "filter_by() (in module one.alf.io)": [[6, "one.alf.io.filter_by"]], "from_df() (alfbunch static method)": [[6, "one.alf.io.AlfBunch.from_df"]], "iter_datasets() (in module one.alf.io)": [[6, "one.alf.io.iter_datasets"]], "iter_sessions() (in module one.alf.io)": [[6, "one.alf.io.iter_sessions"]], "load_file_content() (in module one.alf.io)": [[6, "one.alf.io.load_file_content"]], "load_object() (in module one.alf.io)": [[6, "one.alf.io.load_object"]], "next_num_folder() (in module one.alf.io)": [[6, "one.alf.io.next_num_folder"]], "one.alf.io": [[6, "module-one.alf.io"]], "read_ts() (in module one.alf.io)": [[6, "one.alf.io.read_ts"]], "remove_empty_folders() (in module one.alf.io)": [[6, "one.alf.io.remove_empty_folders"]], "remove_uuid_file() (in module one.alf.io)": [[6, "one.alf.io.remove_uuid_file"]], "remove_uuid_recursive() (in module one.alf.io)": [[6, "one.alf.io.remove_uuid_recursive"]], "save_metadata() (in module one.alf.io)": [[6, "one.alf.io.save_metadata"]], "save_object_npy() (in module one.alf.io)": [[6, "one.alf.io.save_object_npy"]], "to_df() (alfbunch method)": [[6, "one.alf.io.AlfBunch.to_df"]], "ts2vec() (in module one.alf.io)": [[6, "one.alf.io.ts2vec"]], "collection_spec (in module one.alf.spec)": [[7, "one.alf.spec.COLLECTION_SPEC"], [8, "one.alf.spec.COLLECTION_SPEC"]], "file_spec (in module one.alf.spec)": [[7, "one.alf.spec.FILE_SPEC"], [9, "one.alf.spec.FILE_SPEC"]], "full_spec (in module one.alf.spec)": [[7, "one.alf.spec.FULL_SPEC"], [10, "one.alf.spec.FULL_SPEC"]], "rel_path_spec (in module one.alf.spec)": [[7, "one.alf.spec.REL_PATH_SPEC"], [11, "one.alf.spec.REL_PATH_SPEC"]], "session_spec (in module one.alf.spec)": [[7, "one.alf.spec.SESSION_SPEC"], [12, "one.alf.spec.SESSION_SPEC"]], "spec_description (in module one.alf.spec)": [[7, "one.alf.spec.SPEC_DESCRIPTION"], [13, "one.alf.spec.SPEC_DESCRIPTION"]], "describe() (in module one.alf.spec)": [[7, "one.alf.spec.describe"]], "is_session_path() (in module one.alf.spec)": [[7, "one.alf.spec.is_session_path"]], "is_uuid() (in module one.alf.spec)": [[7, "one.alf.spec.is_uuid"]], "is_uuid_string() (in module one.alf.spec)": [[7, "one.alf.spec.is_uuid_string"]], "is_valid() (in module one.alf.spec)": [[7, "one.alf.spec.is_valid"]], "one.alf.spec": [[7, "module-one.alf.spec"]], "path_pattern() (in module one.alf.spec)": [[7, "one.alf.spec.path_pattern"]], "readablealf() (in module one.alf.spec)": [[7, "one.alf.spec.readableALF"]], "regex() (in module one.alf.spec)": [[7, "one.alf.spec.regex"]], "to_alf() (in module one.alf.spec)": [[7, "one.alf.spec.to_alf"]], "one() (in module one.api)": [[14, "one.api.ONE"]], "one (class in one.api)": [[14, "one.api.One"]], "onealyx (class in one.api)": [[14, "one.api.OneAlyx"]], "alyx (onealyx property)": [[14, "one.api.OneAlyx.alyx"]], "cache_dir (onealyx property)": [[14, "one.api.OneAlyx.cache_dir"]], "dataset2type() (onealyx method)": [[14, "one.api.OneAlyx.dataset2type"]], "describe_dataset() (onealyx method)": [[14, "one.api.OneAlyx.describe_dataset"]], "describe_revision() (onealyx method)": [[14, "one.api.OneAlyx.describe_revision"]], "eid2path() (onealyx method)": [[14, "one.api.OneAlyx.eid2path"]], "eid2pid() (onealyx method)": [[14, "one.api.OneAlyx.eid2pid"]], "get_details() (one method)": [[14, "one.api.One.get_details"]], "get_details() (onealyx method)": [[14, "one.api.OneAlyx.get_details"]], "list_aggregates() (onealyx method)": [[14, "one.api.OneAlyx.list_aggregates"]], "list_collections() (one method)": [[14, "one.api.One.list_collections"]], "list_datasets() (one method)": [[14, "one.api.One.list_datasets"]], "list_datasets() (onealyx method)": [[14, "one.api.OneAlyx.list_datasets"]], "list_revisions() (one method)": [[14, "one.api.One.list_revisions"]], "list_subjects() (one method)": [[14, "one.api.One.list_subjects"]], "load_aggregate() (onealyx method)": [[14, "one.api.OneAlyx.load_aggregate"]], "load_cache() (one method)": [[14, "one.api.One.load_cache"]], "load_cache() (onealyx method)": [[14, "one.api.OneAlyx.load_cache"]], "load_collection() (one method)": [[14, "one.api.One.load_collection"]], "load_dataset() (one method)": [[14, "one.api.One.load_dataset"]], "load_dataset_from_id() (one method)": [[14, "one.api.One.load_dataset_from_id"]], "load_datasets() (one method)": [[14, "one.api.One.load_datasets"]], "load_object() (one method)": [[14, "one.api.One.load_object"]], "offline (one property)": [[14, "one.api.One.offline"]], "one.api": [[14, "module-one.api"]], "path2eid() (onealyx method)": [[14, "one.api.OneAlyx.path2eid"]], "path2url() (onealyx method)": [[14, "one.api.OneAlyx.path2url"]], "pid2eid() (onealyx method)": [[14, "one.api.OneAlyx.pid2eid"]], "refresh_cache() (one method)": [[14, "one.api.One.refresh_cache"]], "save_cache() (one method)": [[14, "one.api.One.save_cache"]], "save_loaded_ids() (one method)": [[14, "one.api.One.save_loaded_ids"]], "search() (one method)": [[14, "one.api.One.search"]], "search() (onealyx method)": [[14, "one.api.OneAlyx.search"]], "search_insertions() (onealyx method)": [[14, "one.api.OneAlyx.search_insertions"]], "search_terms() (one method)": [[14, "one.api.One.search_terms"]], "search_terms() (onealyx method)": [[14, "one.api.OneAlyx.search_terms"]], "setup() (one static method)": [[14, "one.api.One.setup"]], "setup() (onealyx static method)": [[14, "one.api.OneAlyx.setup"]], "type2datasets() (onealyx method)": [[14, "one.api.OneAlyx.type2datasets"]], "conversionmixin (class in one.converters)": [[15, "one.converters.ConversionMixin"]], "dict2ref() (conversionmixin static method)": [[15, "one.converters.ConversionMixin.dict2ref"]], "eid2path() (conversionmixin method)": [[15, "one.converters.ConversionMixin.eid2path"]], "eid2ref() (conversionmixin method)": [[15, "one.converters.ConversionMixin.eid2ref"]], "is_exp_ref() (conversionmixin static method)": [[15, "one.converters.ConversionMixin.is_exp_ref"]], "one.converters": [[15, "module-one.converters"]], "one_path_from_dataset() (in module one.converters)": [[15, "one.converters.one_path_from_dataset"]], "parse_values() (in module one.converters)": [[15, "one.converters.parse_values"]], "path2eid() (conversionmixin method)": [[15, "one.converters.ConversionMixin.path2eid"]], "path2record() (conversionmixin method)": [[15, "one.converters.ConversionMixin.path2record"]], "path2ref() (conversionmixin static method)": [[15, "one.converters.ConversionMixin.path2ref"]], "path2url() (conversionmixin method)": [[15, "one.converters.ConversionMixin.path2url"]], "path_from_dataset() (in module one.converters)": [[15, "one.converters.path_from_dataset"]], "path_from_filerecord() (in module one.converters)": [[15, "one.converters.path_from_filerecord"]], "record2path() (conversionmixin method)": [[15, "one.converters.ConversionMixin.record2path"]], "record2url() (conversionmixin method)": [[15, "one.converters.ConversionMixin.record2url"]], "recurse() (in module one.converters)": [[15, "one.converters.recurse"]], "ref2dict() (conversionmixin static method)": [[15, "one.converters.ConversionMixin.ref2dict"]], "ref2eid() (conversionmixin method)": [[15, "one.converters.ConversionMixin.ref2eid"]], "ref2path() (conversionmixin method)": [[15, "one.converters.ConversionMixin.ref2path"]], "session_record2path() (in module one.converters)": [[15, "one.converters.session_record2path"]], "to_eid() (conversionmixin method)": [[15, "one.converters.ConversionMixin.to_eid"]], "cache_dir_default (in module one.params)": [[16, "one.params.CACHE_DIR_DEFAULT"], [17, "one.params.CACHE_DIR_DEFAULT"]], "check_cache_conflict() (in module one.params)": [[16, "one.params.check_cache_conflict"]], "default() (in module one.params)": [[16, "one.params.default"]], "get() (in module one.params)": [[16, "one.params.get"]], "get_cache_dir() (in module one.params)": [[16, "one.params.get_cache_dir"]], "get_default_client() (in module one.params)": [[16, "one.params.get_default_client"]], "get_params_dir() (in module one.params)": [[16, "one.params.get_params_dir"]], "one.params": [[16, "module-one.params"]], "save() (in module one.params)": [[16, "one.params.save"]], "setup() (in module one.params)": [[16, "one.params.setup"]], "registrationclient (class in one.registration)": [[18, "one.registration.RegistrationClient"]], "assert_exists() (registrationclient method)": [[18, "one.registration.RegistrationClient.assert_exists"]], "create_new_session() (registrationclient method)": [[18, "one.registration.RegistrationClient.create_new_session"]], "create_sessions() (registrationclient method)": [[18, "one.registration.RegistrationClient.create_sessions"]], "ensure_iso8601() (registrationclient static method)": [[18, "one.registration.RegistrationClient.ensure_ISO8601"]], "find_files() (registrationclient method)": [[18, "one.registration.RegistrationClient.find_files"]], "get_dataset_type() (in module one.registration)": [[18, "one.registration.get_dataset_type"]], "one.registration": [[18, "module-one.registration"]], "register_files() (registrationclient method)": [[18, "one.registration.RegistrationClient.register_files"]], "register_session() (registrationclient method)": [[18, "one.registration.RegistrationClient.register_session"]], "register_water_administration() (registrationclient method)": [[18, "one.registration.RegistrationClient.register_water_administration"]], "register_weight() (registrationclient method)": [[18, "one.registration.RegistrationClient.register_weight"]], "one.remote": [[19, "module-one.remote"]], "get_aws_access_keys() (in module one.remote.aws)": [[20, "one.remote.aws.get_aws_access_keys"]], "get_s3_from_alyx() (in module one.remote.aws)": [[20, "one.remote.aws.get_s3_from_alyx"]], "get_s3_public() (in module one.remote.aws)": [[20, "one.remote.aws.get_s3_public"]], "get_s3_virtual_host() (in module one.remote.aws)": [[20, "one.remote.aws.get_s3_virtual_host"]], "is_folder() (in module one.remote.aws)": [[20, "one.remote.aws.is_folder"]], "one.remote.aws": [[20, "module-one.remote.aws"]], "s3_download_file() (in module one.remote.aws)": [[20, "one.remote.aws.s3_download_file"]], "s3_download_folder() (in module one.remote.aws)": [[20, "one.remote.aws.s3_download_folder"]], "alyx_json (in module one.remote.base)": [[21, "one.remote.base.ALYX_JSON"], [22, "one.remote.base.ALYX_JSON"]], "downloadclient (class in one.remote.base)": [[21, "one.remote.base.DownloadClient"]], "download_file() (downloadclient method)": [[21, "one.remote.base.DownloadClient.download_file"]], "load_client_params() (in module one.remote.base)": [[21, "one.remote.base.load_client_params"]], "one.remote.base": [[21, "module-one.remote.base"]], "repo_from_alyx() (downloadclient static method)": [[21, "one.remote.base.DownloadClient.repo_from_alyx"]], "save_client_params() (in module one.remote.base)": [[21, "one.remote.base.save_client_params"]], "setup() (downloadclient static method)": [[21, "one.remote.base.DownloadClient.setup"]], "to_address() (downloadclient method)": [[21, "one.remote.base.DownloadClient.to_address"]], "globus (class in one.remote.globus)": [[23, "one.remote.globus.Globus"]], "add_endpoint() (globus method)": [[23, "one.remote.globus.Globus.add_endpoint"]], "as_globus_path() (in module one.remote.globus)": [[23, "one.remote.globus.as_globus_path"]], "delete_data() (globus method)": [[23, "one.remote.globus.Globus.delete_data"]], "download_file() (globus method)": [[23, "one.remote.globus.Globus.download_file"]], "fetch_endpoints_from_alyx() (globus method)": [[23, "one.remote.globus.Globus.fetch_endpoints_from_alyx"]], "get_lab_from_endpoint_id() (in module one.remote.globus)": [[23, "one.remote.globus.get_lab_from_endpoint_id"]], "is_logged_in (globus property)": [[23, "one.remote.globus.Globus.is_logged_in"]], "login() (globus method)": [[23, "one.remote.globus.Globus.login"]], "logout() (globus method)": [[23, "one.remote.globus.Globus.logout"]], "ls() (globus method)": [[23, "one.remote.globus.Globus.ls"]], "mv() (globus method)": [[23, "one.remote.globus.Globus.mv"]], "one.remote.globus": [[23, "module-one.remote.globus"]], "run_task() (globus method)": [[23, "one.remote.globus.Globus.run_task"]], "setup() (globus static method)": [[23, "one.remote.globus.Globus.setup"]], "task_wait_async() (globus method)": [[23, "one.remote.globus.Globus.task_wait_async"]], "to_address() (globus method)": [[23, "one.remote.globus.Globus.to_address"]], "transfer_data() (globus method)": [[23, "one.remote.globus.Globus.transfer_data"]], "client_key (in module one.remote.globus)": [[24, "one.remote.globus.CLIENT_KEY"]], "default_par (in module one.remote.globus)": [[25, "one.remote.globus.DEFAULT_PAR"]], "status_map (in module one.remote.globus)": [[26, "one.remote.globus.STATUS_MAP"]], "one.tests": [[27, "module-one.tests"]], "one.tests.alf": [[28, "module-one.tests.alf"]], "testalfget (class in one.tests.alf.test_alf_files)": [[29, "one.tests.alf.test_alf_files.TestALFGet"]], "testalfparse (class in one.tests.alf.test_alf_files)": [[29, "one.tests.alf.test_alf_files.TestAlfParse"]], "one.tests.alf.test_alf_files": [[29, "module-one.tests.alf.test_alf_files"]], "test_add_uuid() (testalfparse method)": [[29, "one.tests.alf.test_alf_files.TestAlfParse.test_add_uuid"]], "test_filename_parts() (testalfparse method)": [[29, "one.tests.alf.test_alf_files.TestAlfParse.test_filename_parts"]], "test_folder_parts() (testalfparse method)": [[29, "one.tests.alf.test_alf_files.TestAlfParse.test_folder_parts"]], "test_full_path_parts() (testalfparse method)": [[29, "one.tests.alf.test_alf_files.TestAlfParse.test_full_path_parts"]], "test_get_alf_path() (testalfget method)": [[29, "one.tests.alf.test_alf_files.TestALFGet.test_get_alf_path"]], "test_get_session_folder() (testalfget method)": [[29, "one.tests.alf.test_alf_files.TestALFGet.test_get_session_folder"]], "test_isdatetime() (testalfparse method)": [[29, "one.tests.alf.test_alf_files.TestAlfParse.test_isdatetime"]], "test_rel_path_parts() (testalfparse method)": [[29, "one.tests.alf.test_alf_files.TestAlfParse.test_rel_path_parts"]], "test_remove_uuid() (testalfparse method)": [[29, "one.tests.alf.test_alf_files.TestAlfParse.test_remove_uuid"]], "test_session_path_parts() (testalfparse method)": [[29, "one.tests.alf.test_alf_files.TestAlfParse.test_session_path_parts"]], "testalffolders (class in one.tests.alf.test_alf_io)": [[30, "one.tests.alf.test_alf_io.TestALFFolders"]], "testalfbunch (class in one.tests.alf.test_alf_io)": [[30, "one.tests.alf.test_alf_io.TestAlfBunch"]], "testuuid_files (class in one.tests.alf.test_alf_io)": [[30, "one.tests.alf.test_alf_io.TestUUID_Files"]], "testsalf (class in one.tests.alf.test_alf_io)": [[30, "one.tests.alf.test_alf_io.TestsAlf"]], "testsalfpartsfilters (class in one.tests.alf.test_alf_io)": [[30, "one.tests.alf.test_alf_io.TestsAlfPartsFilters"]], "testsloadfile (class in one.tests.alf.test_alf_io)": [[30, "one.tests.alf.test_alf_io.TestsLoadFile"]], "testsloadfilenonstandard (class in one.tests.alf.test_alf_io)": [[30, "one.tests.alf.test_alf_io.TestsLoadFileNonStandard"]], "one.tests.alf.test_alf_io": [[30, "module-one.tests.alf.test_alf_io"]], "session_path (testalffolders attribute)": [[30, "one.tests.alf.test_alf_io.TestALFFolders.session_path"]], "setup() (testsalf method)": [[30, "one.tests.alf.test_alf_io.TestsAlf.setUp"]], "setup() (testsalfpartsfilters method)": [[30, "one.tests.alf.test_alf_io.TestsAlfPartsFilters.setUp"]], "setup() (testsloadfile method)": [[30, "one.tests.alf.test_alf_io.TestsLoadFile.setUp"]], "setup() (testsloadfilenonstandard method)": [[30, "one.tests.alf.test_alf_io.TestsLoadFileNonStandard.setUp"]], "setupclass() (testalffolders class method)": [[30, "one.tests.alf.test_alf_io.TestALFFolders.setUpClass"]], "teardown() (testalffolders method)": [[30, "one.tests.alf.test_alf_io.TestALFFolders.tearDown"]], "teardown() (testsalf method)": [[30, "one.tests.alf.test_alf_io.TestsAlf.tearDown"]], "teardown() (testsalfpartsfilters method)": [[30, "one.tests.alf.test_alf_io.TestsAlfPartsFilters.tearDown"]], "teardown() (testsloadfile method)": [[30, "one.tests.alf.test_alf_io.TestsLoadFile.tearDown"]], "teardownclass() (testalffolders class method)": [[30, "one.tests.alf.test_alf_io.TestALFFolders.tearDownClass"]], "tempdir (testalffolders attribute)": [[30, "one.tests.alf.test_alf_io.TestALFFolders.tempdir"]], "test_append_list() (testalfbunch method)": [[30, "one.tests.alf.test_alf_io.TestAlfBunch.test_append_list"]], 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\ No newline at end of file
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"one.tests.test_converters": [[39, "module-one.tests.test_converters"]], "one.tests.test_one": [[40, "module-one.tests.test_one"]], "one.tests.test_params": [[41, "module-one.tests.test_params"]], "one.tests.test_registration": [[42, "module-one.tests.test_registration"]], "one.tests.util": [[43, "module-one.tests.util"]], "one.util": [[44, "module-one.util"]], "one.webclient": [[45, "module-one.webclient"]], "ALyx Filenames (ALF)": [[46, "alyx-filenames-alf"]], "Optional components": [[46, "optional-components"]], "Collections": [[46, "collections"], [57, "Collections"]], "Revisions": [[46, "revisions"], [57, "Revisions"]], "Namespace": [[46, "namespace"]], "Timescale": [[46, "timescale"]], "Extension": [[46, "extension"]], "Extra": [[46, "extra"]], "Relations": [[46, "relations"]], "Glossary": [[46, "glossary"]], "Dataset name": [[46, "dataset-name"]], "Dataset type": [[46, "dataset-type"]], "Session path": [[46, "session-path"]], "Relative path": [[46, "relative-path"]], "ALF path": 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"Datasets": [[53, "Datasets"], [64, "datasets"]], "Dataset types": [[53, "Dataset-types"]], "Experiment IDs": [[54, "Experiment-IDs"], [64, "experiment-ids"]], "ONE REST queries": [[55, "ONE-REST-queries"]], "one.search vs one.alyx.rest": [[55, "one.search-vs-one.alyx.rest"]], "Accessing other Alyx tables": [[55, "Accessing-other-Alyx-tables"]], "Searching with one.alyx.rest": [[55, "Searching-with-one.alyx.rest"]], "Listing with ONE": [[56, "Listing-with-ONE"]], "Filtering lists": [[56, "Filtering-lists"]], "Combining with load methods": [[56, "Combining-with-load-methods"]], "Listing aggregate datasets": [[56, "Listing-aggregate-datasets"]], "Loading with ONE": [[57, "Loading-with-ONE"]], "Download only": [[57, "Download-only"]], "Advanced loading": [[57, "Advanced-loading"]], "Filtering attributes": [[57, "Filtering-attributes"]], "Loading with file name parts": [[57, "Loading-with-file-name-parts"]], "More regex examples": [[57, "More-regex-examples"]], "Load spike times from a 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dataset_types remote arguments": [[60, "The-dataset,-datasets-and-dataset_types-remote-arguments"]], "Regex systems between modes": [[60, "Regex-systems-between-modes"]], "Searching data with a release tag": [[60, "Searching-data-with-a-release-tag"]], "Searching insertions": [[60, "Searching-insertions"]], "Recording data access": [[61, "Recording-data-access"]], "How to set up and save": [[61, "How-to-set-up-and-save"]], "Example": [[61, "Example"]], "Useful Alyx REST queries": [[62, "Useful-Alyx-REST-queries"]], "Exploring the REST endpoints": [[62, "Exploring-the-REST-endpoints"]], "Example queries": [[62, "Example-queries"]], "convert session dicts to eids": [[62, "convert-session-dicts-to-eids"]], "list sessions that have histology available": [[62, "list-sessions-that-have-histology-available"]], "list experiments spanning channel locations": [[62, "list-experiments-spanning-channel-locations"]], "list sessions that do not have matlab in the project name": [[62, 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Installation": [[63, "installation"]], "2. Setup": [[63, "setup"]], "Connect to IBL Public database": [[63, "connect-to-ibl-public-database"]], "Using local folder structure": [[63, "using-local-folder-structure"]], "Connecting to specific database (relevant for IBL users)": [[63, "connecting-to-specific-database-relevant-for-ibl-users"]], "3. Post setup": [[63, "post-setup"]], "4. Update": [[63, "update"]], "Introduction to ONE (Open Neurophysiology Environment)": [[64, "introduction-to-one-open-neurophysiology-environment"]], "How the ONE API works": [[64, "how-the-one-api-works"]], "Searching for experiments": [[64, "searching-for-experiments"]], "Collections and revisions": [[64, "collections-and-revisions"]], "Listing data": [[64, "listing-data"]], "Loading data": [[64, "loading-data"]], "For data sharers": [[64, "for-data-sharers"]]}, "indexentries": {"module": [[1, "module-one"], [2, "module-one.alf"], [3, "module-one.alf.cache"], [4, "module-one.alf.exceptions"], [5, "module-one.alf.files"], [6, "module-one.alf.io"], [7, "module-one.alf.spec"], [14, "module-one.api"], [15, "module-one.converters"], [16, "module-one.params"], [18, "module-one.registration"], [19, "module-one.remote"], [20, "module-one.remote.aws"], [21, "module-one.remote.base"], [23, "module-one.remote.globus"], [27, "module-one.tests"], [28, "module-one.tests.alf"], [29, 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"one.alf.spec.to_alf"]], "one() (in module one.api)": [[14, "one.api.ONE"]], "one (class in one.api)": [[14, "one.api.One"]], "onealyx (class in one.api)": [[14, "one.api.OneAlyx"]], "alyx (onealyx property)": [[14, "one.api.OneAlyx.alyx"]], "cache_dir (onealyx property)": [[14, "one.api.OneAlyx.cache_dir"]], "dataset2type() (onealyx method)": [[14, "one.api.OneAlyx.dataset2type"]], "describe_dataset() (onealyx method)": [[14, "one.api.OneAlyx.describe_dataset"]], "describe_revision() (onealyx method)": [[14, "one.api.OneAlyx.describe_revision"]], "eid2path() (onealyx method)": [[14, "one.api.OneAlyx.eid2path"]], "eid2pid() (onealyx method)": [[14, "one.api.OneAlyx.eid2pid"]], "get_details() (one method)": [[14, "one.api.One.get_details"]], "get_details() (onealyx method)": [[14, "one.api.OneAlyx.get_details"]], "list_aggregates() (onealyx method)": [[14, "one.api.OneAlyx.list_aggregates"]], "list_collections() (one method)": [[14, "one.api.One.list_collections"]], "list_datasets() (one method)": [[14, "one.api.One.list_datasets"]], "list_datasets() (onealyx method)": [[14, "one.api.OneAlyx.list_datasets"]], "list_revisions() (one method)": [[14, "one.api.One.list_revisions"]], "list_subjects() (one method)": [[14, "one.api.One.list_subjects"]], "load_aggregate() (onealyx method)": [[14, "one.api.OneAlyx.load_aggregate"]], "load_cache() (one method)": [[14, "one.api.One.load_cache"]], "load_cache() (onealyx method)": [[14, "one.api.OneAlyx.load_cache"]], "load_collection() (one method)": [[14, "one.api.One.load_collection"]], "load_dataset() (one method)": [[14, "one.api.One.load_dataset"]], "load_dataset_from_id() (one method)": [[14, "one.api.One.load_dataset_from_id"]], "load_datasets() (one method)": [[14, "one.api.One.load_datasets"]], "load_object() (one method)": [[14, "one.api.One.load_object"]], "offline (one property)": [[14, "one.api.One.offline"]], "one.api": [[14, "module-one.api"]], "path2eid() (onealyx method)": [[14, "one.api.OneAlyx.path2eid"]], "path2url() (onealyx method)": [[14, "one.api.OneAlyx.path2url"]], "pid2eid() (onealyx method)": [[14, "one.api.OneAlyx.pid2eid"]], "refresh_cache() (one method)": [[14, "one.api.One.refresh_cache"]], "save_cache() (one method)": [[14, "one.api.One.save_cache"]], "save_loaded_ids() (one method)": [[14, "one.api.One.save_loaded_ids"]], "search() (one method)": [[14, "one.api.One.search"]], "search() (onealyx method)": [[14, "one.api.OneAlyx.search"]], "search_insertions() (onealyx method)": [[14, "one.api.OneAlyx.search_insertions"]], "search_terms() (one method)": [[14, "one.api.One.search_terms"]], "search_terms() (onealyx method)": [[14, "one.api.OneAlyx.search_terms"]], "setup() (one static method)": [[14, "one.api.One.setup"]], "setup() (onealyx static method)": [[14, "one.api.OneAlyx.setup"]], "type2datasets() (onealyx method)": [[14, "one.api.OneAlyx.type2datasets"]], "conversionmixin (class in one.converters)": [[15, "one.converters.ConversionMixin"]], "dict2ref() (conversionmixin static method)": [[15, "one.converters.ConversionMixin.dict2ref"]], "eid2path() (conversionmixin method)": [[15, "one.converters.ConversionMixin.eid2path"]], "eid2ref() (conversionmixin method)": [[15, "one.converters.ConversionMixin.eid2ref"]], "is_exp_ref() (conversionmixin static method)": [[15, "one.converters.ConversionMixin.is_exp_ref"]], "one.converters": [[15, "module-one.converters"]], "one_path_from_dataset() (in module one.converters)": [[15, "one.converters.one_path_from_dataset"]], "parse_values() (in module one.converters)": [[15, "one.converters.parse_values"]], "path2eid() (conversionmixin method)": [[15, "one.converters.ConversionMixin.path2eid"]], "path2record() (conversionmixin method)": [[15, "one.converters.ConversionMixin.path2record"]], "path2ref() (conversionmixin static method)": [[15, "one.converters.ConversionMixin.path2ref"]], "path2url() (conversionmixin method)": [[15, "one.converters.ConversionMixin.path2url"]], "path_from_dataset() (in module one.converters)": [[15, "one.converters.path_from_dataset"]], "path_from_filerecord() (in module one.converters)": [[15, "one.converters.path_from_filerecord"]], "record2path() (conversionmixin method)": [[15, "one.converters.ConversionMixin.record2path"]], "record2url() (conversionmixin method)": [[15, "one.converters.ConversionMixin.record2url"]], "recurse() (in module one.converters)": [[15, "one.converters.recurse"]], "ref2dict() (conversionmixin static method)": [[15, "one.converters.ConversionMixin.ref2dict"]], "ref2eid() (conversionmixin method)": [[15, "one.converters.ConversionMixin.ref2eid"]], "ref2path() (conversionmixin method)": [[15, "one.converters.ConversionMixin.ref2path"]], "session_record2path() (in module one.converters)": [[15, "one.converters.session_record2path"]], "to_eid() (conversionmixin method)": [[15, "one.converters.ConversionMixin.to_eid"]], "cache_dir_default (in module one.params)": [[16, "one.params.CACHE_DIR_DEFAULT"], [17, "one.params.CACHE_DIR_DEFAULT"]], "check_cache_conflict() (in module one.params)": [[16, "one.params.check_cache_conflict"]], "default() (in module one.params)": [[16, "one.params.default"]], "get() (in module one.params)": [[16, "one.params.get"]], "get_cache_dir() (in module one.params)": [[16, "one.params.get_cache_dir"]], "get_default_client() (in module one.params)": [[16, "one.params.get_default_client"]], "get_params_dir() (in module one.params)": [[16, "one.params.get_params_dir"]], "one.params": [[16, "module-one.params"]], "save() (in module one.params)": [[16, "one.params.save"]], "setup() (in module one.params)": [[16, "one.params.setup"]], "registrationclient (class in one.registration)": [[18, "one.registration.RegistrationClient"]], "assert_exists() (registrationclient method)": [[18, "one.registration.RegistrationClient.assert_exists"]], "create_new_session() (registrationclient method)": [[18, "one.registration.RegistrationClient.create_new_session"]], "create_sessions() (registrationclient method)": [[18, "one.registration.RegistrationClient.create_sessions"]], "ensure_iso8601() (registrationclient static method)": [[18, "one.registration.RegistrationClient.ensure_ISO8601"]], "find_files() (registrationclient method)": [[18, "one.registration.RegistrationClient.find_files"]], "get_dataset_type() (in module one.registration)": [[18, "one.registration.get_dataset_type"]], "one.registration": [[18, "module-one.registration"]], "register_files() (registrationclient method)": [[18, "one.registration.RegistrationClient.register_files"]], "register_session() (registrationclient method)": [[18, "one.registration.RegistrationClient.register_session"]], "register_water_administration() (registrationclient method)": [[18, "one.registration.RegistrationClient.register_water_administration"]], "register_weight() (registrationclient method)": [[18, "one.registration.RegistrationClient.register_weight"]], "one.remote": [[19, "module-one.remote"]], "get_aws_access_keys() (in module one.remote.aws)": [[20, "one.remote.aws.get_aws_access_keys"]], "get_s3_from_alyx() (in module one.remote.aws)": [[20, "one.remote.aws.get_s3_from_alyx"]], "get_s3_public() (in module one.remote.aws)": [[20, "one.remote.aws.get_s3_public"]], "get_s3_virtual_host() (in module one.remote.aws)": [[20, "one.remote.aws.get_s3_virtual_host"]], "is_folder() (in module one.remote.aws)": [[20, "one.remote.aws.is_folder"]], "one.remote.aws": [[20, "module-one.remote.aws"]], "s3_download_file() (in module one.remote.aws)": [[20, "one.remote.aws.s3_download_file"]], "s3_download_folder() (in module one.remote.aws)": [[20, "one.remote.aws.s3_download_folder"]], "alyx_json (in module one.remote.base)": [[21, "one.remote.base.ALYX_JSON"], [22, "one.remote.base.ALYX_JSON"]], "downloadclient (class in one.remote.base)": [[21, "one.remote.base.DownloadClient"]], "download_file() (downloadclient method)": [[21, "one.remote.base.DownloadClient.download_file"]], "load_client_params() (in module one.remote.base)": [[21, "one.remote.base.load_client_params"]], "one.remote.base": [[21, "module-one.remote.base"]], "repo_from_alyx() (downloadclient static method)": [[21, "one.remote.base.DownloadClient.repo_from_alyx"]], "save_client_params() (in module one.remote.base)": [[21, "one.remote.base.save_client_params"]], "setup() (downloadclient static method)": [[21, "one.remote.base.DownloadClient.setup"]], "to_address() (downloadclient method)": [[21, "one.remote.base.DownloadClient.to_address"]], "globus (class in one.remote.globus)": [[23, "one.remote.globus.Globus"]], "add_endpoint() (globus method)": [[23, "one.remote.globus.Globus.add_endpoint"]], "as_globus_path() (in module one.remote.globus)": [[23, "one.remote.globus.as_globus_path"]], "delete_data() (globus method)": [[23, "one.remote.globus.Globus.delete_data"]], "download_file() (globus method)": [[23, "one.remote.globus.Globus.download_file"]], "fetch_endpoints_from_alyx() (globus method)": [[23, "one.remote.globus.Globus.fetch_endpoints_from_alyx"]], "get_lab_from_endpoint_id() (in module one.remote.globus)": [[23, "one.remote.globus.get_lab_from_endpoint_id"]], "is_logged_in (globus property)": [[23, "one.remote.globus.Globus.is_logged_in"]], "login() (globus method)": [[23, "one.remote.globus.Globus.login"]], "logout() (globus method)": [[23, "one.remote.globus.Globus.logout"]], "ls() (globus method)": [[23, "one.remote.globus.Globus.ls"]], "mv() (globus method)": [[23, "one.remote.globus.Globus.mv"]], "one.remote.globus": [[23, "module-one.remote.globus"]], "run_task() (globus method)": [[23, "one.remote.globus.Globus.run_task"]], "setup() (globus static method)": [[23, "one.remote.globus.Globus.setup"]], "task_wait_async() (globus method)": [[23, "one.remote.globus.Globus.task_wait_async"]], "to_address() (globus method)": [[23, "one.remote.globus.Globus.to_address"]], "transfer_data() (globus method)": [[23, "one.remote.globus.Globus.transfer_data"]], "client_key (in module one.remote.globus)": [[24, "one.remote.globus.CLIENT_KEY"]], "default_par (in module one.remote.globus)": [[25, "one.remote.globus.DEFAULT_PAR"]], "status_map (in module one.remote.globus)": [[26, "one.remote.globus.STATUS_MAP"]], "one.tests": [[27, "module-one.tests"]], "one.tests.alf": [[28, "module-one.tests.alf"]], "testalfget (class in one.tests.alf.test_alf_files)": [[29, "one.tests.alf.test_alf_files.TestALFGet"]], "testalfparse (class in one.tests.alf.test_alf_files)": [[29, "one.tests.alf.test_alf_files.TestAlfParse"]], "one.tests.alf.test_alf_files": [[29, "module-one.tests.alf.test_alf_files"]], "test_add_uuid() (testalfparse method)": [[29, "one.tests.alf.test_alf_files.TestAlfParse.test_add_uuid"]], "test_filename_parts() (testalfparse method)": [[29, "one.tests.alf.test_alf_files.TestAlfParse.test_filename_parts"]], "test_folder_parts() (testalfparse method)": [[29, "one.tests.alf.test_alf_files.TestAlfParse.test_folder_parts"]], "test_full_path_parts() (testalfparse method)": [[29, "one.tests.alf.test_alf_files.TestAlfParse.test_full_path_parts"]], "test_get_alf_path() (testalfget method)": [[29, "one.tests.alf.test_alf_files.TestALFGet.test_get_alf_path"]], "test_get_session_folder() (testalfget method)": [[29, "one.tests.alf.test_alf_files.TestALFGet.test_get_session_folder"]], "test_isdatetime() (testalfparse method)": [[29, "one.tests.alf.test_alf_files.TestAlfParse.test_isdatetime"]], "test_rel_path_parts() (testalfparse method)": [[29, "one.tests.alf.test_alf_files.TestAlfParse.test_rel_path_parts"]], "test_remove_uuid() (testalfparse method)": [[29, "one.tests.alf.test_alf_files.TestAlfParse.test_remove_uuid"]], "test_session_path_parts() (testalfparse method)": [[29, "one.tests.alf.test_alf_files.TestAlfParse.test_session_path_parts"]], "testalffolders (class in one.tests.alf.test_alf_io)": [[30, "one.tests.alf.test_alf_io.TestALFFolders"]], "testalfbunch (class in one.tests.alf.test_alf_io)": [[30, "one.tests.alf.test_alf_io.TestAlfBunch"]], "testuuid_files (class in one.tests.alf.test_alf_io)": [[30, "one.tests.alf.test_alf_io.TestUUID_Files"]], "testsalf (class in one.tests.alf.test_alf_io)": [[30, "one.tests.alf.test_alf_io.TestsAlf"]], "testsalfpartsfilters (class in one.tests.alf.test_alf_io)": [[30, "one.tests.alf.test_alf_io.TestsAlfPartsFilters"]], "testsloadfile (class in one.tests.alf.test_alf_io)": [[30, "one.tests.alf.test_alf_io.TestsLoadFile"]], "testsloadfilenonstandard (class in one.tests.alf.test_alf_io)": [[30, "one.tests.alf.test_alf_io.TestsLoadFileNonStandard"]], "one.tests.alf.test_alf_io": [[30, "module-one.tests.alf.test_alf_io"]], "session_path (testalffolders attribute)": [[30, "one.tests.alf.test_alf_io.TestALFFolders.session_path"]], "setup() (testsalf method)": [[30, "one.tests.alf.test_alf_io.TestsAlf.setUp"]], "setup() (testsalfpartsfilters method)": [[30, "one.tests.alf.test_alf_io.TestsAlfPartsFilters.setUp"]], "setup() (testsloadfile method)": [[30, "one.tests.alf.test_alf_io.TestsLoadFile.setUp"]], "setup() (testsloadfilenonstandard method)": [[30, "one.tests.alf.test_alf_io.TestsLoadFileNonStandard.setUp"]], "setupclass() (testalffolders class method)": [[30, "one.tests.alf.test_alf_io.TestALFFolders.setUpClass"]], "teardown() (testalffolders method)": [[30, "one.tests.alf.test_alf_io.TestALFFolders.tearDown"]], "teardown() (testsalf method)": [[30, "one.tests.alf.test_alf_io.TestsAlf.tearDown"]], "teardown() (testsalfpartsfilters method)": [[30, "one.tests.alf.test_alf_io.TestsAlfPartsFilters.tearDown"]], "teardown() (testsloadfile method)": [[30, "one.tests.alf.test_alf_io.TestsLoadFile.tearDown"]], "teardownclass() (testalffolders class method)": [[30, "one.tests.alf.test_alf_io.TestALFFolders.tearDownClass"]], "tempdir (testalffolders attribute)": [[30, "one.tests.alf.test_alf_io.TestALFFolders.tempdir"]], "test_append_list() (testalfbunch method)": [[30, "one.tests.alf.test_alf_io.TestAlfBunch.test_append_list"]], "test_append_numpy() (testalfbunch method)": [[30, "one.tests.alf.test_alf_io.TestAlfBunch.test_append_numpy"]], "test_check_dimensions() (testalfbunch method)": [[30, "one.tests.alf.test_alf_io.TestAlfBunch.test_check_dimensions"]], "test_check_dimensions() (testsalf method)": [[30, "one.tests.alf.test_alf_io.TestsAlf.test_check_dimensions"]], "test_exists() (testsalf method)": [[30, "one.tests.alf.test_alf_io.TestsAlf.test_exists"]], "test_filter_by() (testsalfpartsfilters method)": [[30, "one.tests.alf.test_alf_io.TestsAlfPartsFilters.test_filter_by"]], "test_from_dataframe() (testalfbunch method)": [[30, "one.tests.alf.test_alf_io.TestAlfBunch.test_from_dataframe"]], "test_iter_datasets() (testalffolders method)": [[30, "one.tests.alf.test_alf_io.TestALFFolders.test_iter_datasets"]], "test_iter_sessions() (testalffolders method)": [[30, "one.tests.alf.test_alf_io.TestALFFolders.test_iter_sessions"]], "test_load_file_content() (testsloadfile method)": [[30, "one.tests.alf.test_alf_io.TestsLoadFile.test_load_file_content"]], "test_load_object() (testsalf method)": [[30, "one.tests.alf.test_alf_io.TestsAlf.test_load_object"]], "test_load_sparse_npz() (testsloadfilenonstandard method)": [[30, "one.tests.alf.test_alf_io.TestsLoadFileNonStandard.test_load_sparse_npz"]], "test_ls() (testsalf method)": [[30, "one.tests.alf.test_alf_io.TestsAlf.test_ls"]], "test_metadata_columns() (testsalf method)": [[30, "one.tests.alf.test_alf_io.TestsAlf.test_metadata_columns"]], "test_metadata_columns_uuid() (testsalf method)": [[30, "one.tests.alf.test_alf_io.TestsAlf.test_metadata_columns_UUID"]], "test_next_num_folder() (testalffolders method)": [[30, "one.tests.alf.test_alf_io.TestALFFolders.test_next_num_folder"]], "test_npy_parts_and_file_filters() (testsalfpartsfilters method)": [[30, "one.tests.alf.test_alf_io.TestsAlfPartsFilters.test_npy_parts_and_file_filters"]], "test_read_ts() (testsalf method)": [[30, "one.tests.alf.test_alf_io.TestsAlf.test_read_ts"]], "test_remove_empty_folders() (testalffolders method)": [[30, "one.tests.alf.test_alf_io.TestALFFolders.test_remove_empty_folders"]], "test_remove_uuid() (testuuid_files method)": [[30, "one.tests.alf.test_alf_io.TestUUID_Files.test_remove_uuid"]], "test_remove_uuid_recusive() (testuuid_files method)": [[30, "one.tests.alf.test_alf_io.TestUUID_Files.test_remove_uuid_recusive"]], "test_save_npy() (testsalf method)": [[30, "one.tests.alf.test_alf_io.TestsAlf.test_save_npy"]], "test_to_dataframe_scalars() (testalfbunch method)": [[30, "one.tests.alf.test_alf_io.TestAlfBunch.test_to_dataframe_scalars"]], "test_to_dataframe_vectors() (testalfbunch method)": [[30, "one.tests.alf.test_alf_io.TestAlfBunch.test_to_dataframe_vectors"]], "test_ts2vec() (testsalf method)": [[30, "one.tests.alf.test_alf_io.TestsAlf.test_ts2vec"]], "testalferr (class in one.tests.alf.test_alf_spec)": [[31, "one.tests.alf.test_alf_spec.TestALFErr"]], "testalfspec (class in one.tests.alf.test_alf_spec)": [[31, "one.tests.alf.test_alf_spec.TestALFSpec"]], "one.tests.alf.test_alf_spec": [[31, "module-one.tests.alf.test_alf_spec"]], "teardown() (testalferr method)": [[31, "one.tests.alf.test_alf_spec.TestALFErr.tearDown"]], "test_alferror() (testalferr method)": [[31, "one.tests.alf.test_alf_spec.TestALFErr.test_ALFError"]], "test_describe() (testalfspec method)": [[31, "one.tests.alf.test_alf_spec.TestALFSpec.test_describe"]], "test_dromedary() (testalfspec method)": [[31, "one.tests.alf.test_alf_spec.TestALFSpec.test_dromedary"]], "test_is_session_folder() (testalfspec method)": [[31, "one.tests.alf.test_alf_spec.TestALFSpec.test_is_session_folder"]], "test_is_uuid() (testalfspec method)": [[31, "one.tests.alf.test_alf_spec.TestALFSpec.test_is_uuid"]], "test_is_uuid_string() (testalfspec method)": [[31, "one.tests.alf.test_alf_spec.TestALFSpec.test_is_uuid_string"]], "test_is_valid() (testalfspec method)": [[31, 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(testonecache method)": [[40, "one.tests.test_one.TestONECache.test_load_collection"]], "test_load_dataset() (testonecache method)": [[40, "one.tests.test_one.TestONECache.test_load_dataset"]], "test_load_dataset() (testoneremote method)": [[40, "one.tests.test_one.TestOneRemote.test_load_dataset"]], "test_load_dataset_from_id() (testonecache method)": [[40, "one.tests.test_one.TestONECache.test_load_dataset_from_id"]], "test_load_datasets() (testonecache method)": [[40, "one.tests.test_one.TestONECache.test_load_datasets"]], "test_load_object() (testonecache method)": [[40, "one.tests.test_one.TestONECache.test_load_object"]], "test_load_object() (testoneremote method)": [[40, "one.tests.test_one.TestOneRemote.test_load_object"]], "test_local_cache_setup_prompt() (testonesetup method)": [[40, "one.tests.test_one.TestOneSetup.test_local_cache_setup_prompt"]], "test_offline_repr() (testonecache method)": [[40, "one.tests.test_one.TestONECache.test_offline_repr"]], "test_one_factory() (testonesetup method)": [[40, "one.tests.test_one.TestOneSetup.test_one_factory"]], "test_one_search() (testonecache method)": [[40, "one.tests.test_one.TestONECache.test_one_search"]], "test_online_repr() (testoneremote method)": [[40, "one.tests.test_one.TestOneRemote.test_online_repr"]], "test_parse_id() (testonemisc method)": [[40, "one.tests.test_one.TestOneMisc.test_parse_id"]], "test_patch_params() (testonesetup method)": [[40, "one.tests.test_one.TestOneSetup.test_patch_params"]], "test_pid2eid() (testonealyx method)": [[40, "one.tests.test_one.TestOneAlyx.test_pid2eid"]], "test_refresh_cache() (testonecache method)": [[40, "one.tests.test_one.TestONECache.test_refresh_cache"]], "test_revision_last_before() (testonemisc method)": [[40, "one.tests.test_one.TestOneMisc.test_revision_last_before"]], "test_save_cache() (testonecache method)": [[40, "one.tests.test_one.TestONECache.test_save_cache"]], "test_save_loaded_ids() (testonecache method)": [[40, "one.tests.test_one.TestONECache.test_save_loaded_ids"]], "test_search() (testoneremote method)": [[40, "one.tests.test_one.TestOneRemote.test_search"]], "test_search_insertions() (testoneremote method)": [[40, "one.tests.test_one.TestOneRemote.test_search_insertions"]], "test_search_terms() (testoneremote method)": [[40, "one.tests.test_one.TestOneRemote.test_search_terms"]], "test_ses2records() (testonealyx method)": [[40, "one.tests.test_one.TestOneAlyx.test_ses2records"]], "test_setup() (testonesetup method)": [[40, "one.tests.test_one.TestOneSetup.test_setup"]], "test_setup_silent() (testonesetup method)": [[40, "one.tests.test_one.TestOneSetup.test_setup_silent"]], "test_setup_username() (testonesetup method)": [[40, "one.tests.test_one.TestOneSetup.test_setup_username"]], "test_static_setup() (testonesetup method)": [[40, "one.tests.test_one.TestOneSetup.test_static_setup"]], "test_tag_mismatched_file_record() (testonedownload method)": [[40, "one.tests.test_one.TestOneDownload.test_tag_mismatched_file_record"]], "test_type2datasets() (testonealyx method)": [[40, "one.tests.test_one.TestOneAlyx.test_type2datasets"]], "test_update_cache_from_records() (testonecache method)": [[40, "one.tests.test_one.TestONECache.test_update_cache_from_records"]], "test_url_from_path() (testonealyx method)": [[40, "one.tests.test_one.TestOneAlyx.test_url_from_path"]], "test_url_from_record() (testonealyx method)": [[40, "one.tests.test_one.TestOneAlyx.test_url_from_record"]], "test_validate_date_range() (testonemisc method)": [[40, "one.tests.test_one.TestOneMisc.test_validate_date_range"]], "testoneparamutil (class in one.tests.test_params)": [[41, "one.tests.test_params.TestONEParamUtil"]], "testparamsetup (class in one.tests.test_params)": [[41, "one.tests.test_params.TestParamSetup"]], "one.tests.test_params": [[41, "module-one.tests.test_params"]], "setup() (testoneparamutil method)": [[41, "one.tests.test_params.TestONEParamUtil.setUp"]], "setup() (testparamsetup method)": [[41, "one.tests.test_params.TestParamSetup.setUp"]], "test_get_cache_dir() (testoneparamutil method)": [[41, "one.tests.test_params.TestONEParamUtil.test_get_cache_dir"]], "test_get_default_client() (testoneparamutil method)": [[41, "one.tests.test_params.TestONEParamUtil.test_get_default_client"]], "test_get_params_dir() (testoneparamutil method)": [[41, "one.tests.test_params.TestONEParamUtil.test_get_params_dir"]], "test_key_from_url() (testoneparamutil method)": [[41, "one.tests.test_params.TestONEParamUtil.test_key_from_url"]], "test_setup() (testparamsetup method)": [[41, "one.tests.test_params.TestParamSetup.test_setup"]], "testdatasettypes (class in one.tests.test_registration)": [[42, "one.tests.test_registration.TestDatasetTypes"]], "testregistrationclient (class in one.tests.test_registration)": [[42, "one.tests.test_registration.TestRegistrationClient"]], "one (testregistrationclient attribute)": [[42, "one.tests.test_registration.TestRegistrationClient.one"]], "one.tests.test_registration": [[42, "module-one.tests.test_registration"]], "setup() (testregistrationclient method)": [[42, "one.tests.test_registration.TestRegistrationClient.setUp"]], "setupclass() (testregistrationclient class method)": [[42, "one.tests.test_registration.TestRegistrationClient.setUpClass"]], "subject (testregistrationclient attribute)": [[42, "one.tests.test_registration.TestRegistrationClient.subject"]], "tag (testregistrationclient attribute)": [[42, "one.tests.test_registration.TestRegistrationClient.tag"]], "teardownclass() (testregistrationclient class method)": [[42, "one.tests.test_registration.TestRegistrationClient.tearDownClass"]], "temp_dir (testregistrationclient attribute)": [[42, "one.tests.test_registration.TestRegistrationClient.temp_dir"]], "test_create_new_session() (testregistrationclient method)": [[42, "one.tests.test_registration.TestRegistrationClient.test_create_new_session"]], "test_create_sessions() (testregistrationclient method)": [[42, "one.tests.test_registration.TestRegistrationClient.test_create_sessions"]], "test_ensure_iso8601() (testregistrationclient method)": [[42, "one.tests.test_registration.TestRegistrationClient.test_ensure_ISO8601"]], "test_exists() (testregistrationclient method)": [[42, "one.tests.test_registration.TestRegistrationClient.test_exists"]], "test_find_files() (testregistrationclient method)": [[42, "one.tests.test_registration.TestRegistrationClient.test_find_files"]], "test_get_dataset_type() (testdatasettypes method)": [[42, "one.tests.test_registration.TestDatasetTypes.test_get_dataset_type"]], "test_instantiation() (testregistrationclient method)": [[42, "one.tests.test_registration.TestRegistrationClient.test_instantiation"]], "test_next_revision() (testregistrationclient method)": [[42, "one.tests.test_registration.TestRegistrationClient.test_next_revision"]], "test_register_files() (testregistrationclient method)": [[42, "one.tests.test_registration.TestRegistrationClient.test_register_files"]], "test_register_session() (testregistrationclient method)": [[42, "one.tests.test_registration.TestRegistrationClient.test_register_session"]], "test_register_weight() (testregistrationclient method)": [[42, "one.tests.test_registration.TestRegistrationClient.test_register_weight"]], "test_water_administration() (testregistrationclient method)": [[42, "one.tests.test_registration.TestRegistrationClient.test_water_administration"]], "caches_str2int() (in module one.tests.util)": [[43, "one.tests.util.caches_str2int"]], "create_file_tree() (in module one.tests.util)": [[43, "one.tests.util.create_file_tree"]], "create_schema_cache() (in module one.tests.util)": [[43, "one.tests.util.create_schema_cache"]], "get_file() (in module one.tests.util)": [[43, "one.tests.util.get_file"]], "one.tests.util": [[43, "module-one.tests.util"]], "revisions_datasets_table() (in module one.tests.util)": [[43, "one.tests.util.revisions_datasets_table"]], "set_up_env() (in module one.tests.util)": [[43, "one.tests.util.set_up_env"]], "setup_rest_cache() (in module one.tests.util)": [[43, "one.tests.util.setup_rest_cache"]], "setup_test_params() (in module one.tests.util)": [[43, "one.tests.util.setup_test_params"]], "lazyid (class in one.util)": [[44, "one.util.LazyId"]], "listable() (in module one.util)": [[44, "one.util.Listable"]], "autocomplete() (in module one.util)": [[44, "one.util.autocomplete"]], "cache_int2str() (in module one.util)": [[44, "one.util.cache_int2str"]], "datasets2records() (in module one.util)": [[44, "one.util.datasets2records"]], "ensure_list() (in module one.util)": [[44, "one.util.ensure_list"]], "filter_datasets() (in module one.util)": [[44, "one.util.filter_datasets"]], "filter_revision_last_before() (in module one.util)": [[44, "one.util.filter_revision_last_before"]], "index_last_before() (in module one.util)": [[44, "one.util.index_last_before"]], "one.util": [[44, "module-one.util"]], "parse_id() (in module one.util)": [[44, "one.util.parse_id"]], "patch_cache() (in module one.util)": [[44, "one.util.patch_cache"]], "refresh() (in module one.util)": [[44, "one.util.refresh"]], "ses2eid() (lazyid static method)": [[44, "one.util.LazyId.ses2eid"]], "ses2records() (in module one.util)": [[44, "one.util.ses2records"]], "validate_date_range() (in module one.util)": [[44, "one.util.validate_date_range"]], "alyxclient (class in one.webclient)": [[45, "one.webclient.AlyxClient"]], "authenticate() (alyxclient method)": [[45, "one.webclient.AlyxClient.authenticate"]], "base_url (alyxclient attribute)": [[45, "one.webclient.AlyxClient.base_url"]], "cache_dir (alyxclient property)": [[45, "one.webclient.AlyxClient.cache_dir"]], "clear_rest_cache() (alyxclient method)": [[45, "one.webclient.AlyxClient.clear_rest_cache"]], "dataset_record_to_url() (in module one.webclient)": [[45, "one.webclient.dataset_record_to_url"]], "delete() (alyxclient method)": [[45, "one.webclient.AlyxClient.delete"]], "download_cache_tables() (alyxclient method)": [[45, "one.webclient.AlyxClient.download_cache_tables"]], "download_file() (alyxclient method)": [[45, "one.webclient.AlyxClient.download_file"]], "file_record_to_url() (in module one.webclient)": [[45, "one.webclient.file_record_to_url"]], "get() (alyxclient method)": [[45, "one.webclient.AlyxClient.get"]], "http_download_file() (in module one.webclient)": [[45, "one.webclient.http_download_file"]], "http_download_file_list() (in module one.webclient)": [[45, "one.webclient.http_download_file_list"]], "is_logged_in (alyxclient property)": [[45, "one.webclient.AlyxClient.is_logged_in"]], "json_field_delete() (alyxclient method)": [[45, "one.webclient.AlyxClient.json_field_delete"]], "json_field_remove_key() (alyxclient method)": [[45, "one.webclient.AlyxClient.json_field_remove_key"]], "json_field_update() (alyxclient method)": [[45, "one.webclient.AlyxClient.json_field_update"]], "json_field_write() (alyxclient method)": [[45, "one.webclient.AlyxClient.json_field_write"]], "list_endpoints() (alyxclient method)": [[45, "one.webclient.AlyxClient.list_endpoints"]], "logout() (alyxclient method)": [[45, "one.webclient.AlyxClient.logout"]], "no_cache() (in module one.webclient)": [[45, "one.webclient.no_cache"]], "one.webclient": [[45, "module-one.webclient"]], "patch() (alyxclient method)": [[45, "one.webclient.AlyxClient.patch"]], "post() (alyxclient method)": [[45, "one.webclient.AlyxClient.post"]], "print_endpoint_info() (alyxclient method)": [[45, "one.webclient.AlyxClient.print_endpoint_info"]], "put() (alyxclient method)": [[45, "one.webclient.AlyxClient.put"]], "rel_path2url() (alyxclient method)": [[45, "one.webclient.AlyxClient.rel_path2url"]], "rest() (alyxclient method)": [[45, "one.webclient.AlyxClient.rest"]], "rest_schemes (alyxclient property)": [[45, "one.webclient.AlyxClient.rest_schemes"]], "update_url_params() (in module one.webclient)": [[45, "one.webclient.update_url_params"]], "user (alyxclient attribute)": [[45, "one.webclient.AlyxClient.user"]]}})
\ No newline at end of file