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nidm-spm-results.ttl
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nidm-spm-results.ttl
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@prefix : <http://www.semanticweb.org/owl/owlapi/turtle#> .
@prefix owl: <http://www.w3.org/2002/07/owl#> .
@prefix rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#> .
@prefix spm: <http://www.fil.ion.ucl.ac.uk/spm/ns/#> .
@prefix xml: <http://www.w3.org/XML/1998/namespace> .
@prefix xsd: <http://www.w3.org/2001/XMLSchema#> .
@prefix nidm: <http://nidm.nidash.org/> .
@prefix prov: <http://www.w3.org/ns/prov#> .
@prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> .
@prefix niiri: <http://iri.nidash.org/> .
@prefix xsd_1: <http://www.w3.org/2001/XMLSchema> .
@prefix crypto: <http://www.w3.org/2000/10/swap/crypto#> .
@base <http://www.w3.org/2002/07/owl#> .
[ rdf:type owl:Ontology ;
owl:imports <http://www.w3.org/ns/prov-o#>
] .
#################################################################
#
# Annotation properties
#
#################################################################
### http://nidm.nidash.org/clusterLabels
nidm:clusterLabels rdf:type owl:AnnotationProperty .
### http://nidm.nidash.org/clusterSizeInVoxels
nidm:clusterSizeInVoxels rdf:type owl:AnnotationProperty .
### http://nidm.nidash.org/contrastName
nidm:contrastName rdf:type owl:AnnotationProperty .
### http://nidm.nidash.org/coordinate1
nidm:coordinate1 rdf:type owl:AnnotationProperty .
### http://nidm.nidash.org/coordinate2
nidm:coordinate2 rdf:type owl:AnnotationProperty .
### http://nidm.nidash.org/coordinate3
nidm:coordinate3 rdf:type owl:AnnotationProperty .
### http://nidm.nidash.org/coordinateSpace
nidm:coordinateSpace rdf:type owl:AnnotationProperty .
### http://nidm.nidash.org/coordinateSystem
nidm:coordinateSystem rdf:type owl:AnnotationProperty .
### http://nidm.nidash.org/dimensions
nidm:dimensions rdf:type owl:AnnotationProperty .
### http://nidm.nidash.org/effectDegreesOfFreedom
nidm:effectDegreesOfFreedom rdf:type owl:AnnotationProperty .
### http://nidm.nidash.org/equivalentZStatistic
nidm:equivalentZStatistic rdf:type owl:AnnotationProperty .
### http://nidm.nidash.org/errorDegreesOfFreedom
nidm:errorDegreesOfFreedom rdf:type owl:AnnotationProperty .
### http://nidm.nidash.org/fileName
nidm:fileName rdf:type owl:AnnotationProperty .
### http://nidm.nidash.org/labelId
nidm:labelId rdf:type owl:AnnotationProperty .
### http://nidm.nidash.org/numberOfDimensions
nidm:numberOfDimensions rdf:type owl:AnnotationProperty .
### http://nidm.nidash.org/pValue
nidm:pValue rdf:type owl:AnnotationProperty .
### http://nidm.nidash.org/pValueUncorrected
nidm:pValueUncorrected rdf:type owl:AnnotationProperty .
### http://nidm.nidash.org/randomFieldStationarity
nidm:randomFieldStationarity rdf:type owl:AnnotationProperty .
### http://nidm.nidash.org/softwareRevision
nidm:softwareRevision rdf:type owl:AnnotationProperty .
### http://nidm.nidash.org/softwareVersion
nidm:softwareVersion rdf:type owl:AnnotationProperty .
### http://nidm.nidash.org/statisticType
nidm:statisticType rdf:type owl:AnnotationProperty .
### http://nidm.nidash.org/statisticalTest
nidm:statisticalTest rdf:type owl:AnnotationProperty .
### http://nidm.nidash.org/underlayFile
nidm:underlayFile rdf:type owl:AnnotationProperty .
### http://nidm.nidash.org/visualisation
nidm:visualisation rdf:type owl:AnnotationProperty .
### http://nidm.nidash.org/voxelSize
nidm:voxelSize rdf:type owl:AnnotationProperty .
### http://nidm.nidash.org/voxelToWorldMapping
nidm:voxelToWorldMapping rdf:type owl:AnnotationProperty .
### http://nidm.nidash.org/voxelUnits
nidm:voxelUnits rdf:type owl:AnnotationProperty .
### http://www.fil.ion.ucl.ac.uk/spm/ns/#clusterSizeInResels
spm:clusterSizeInResels rdf:type owl:AnnotationProperty .
### http://www.fil.ion.ucl.ac.uk/spm/ns/#expectedNumberOfClusters
spm:expectedNumberOfClusters rdf:type owl:AnnotationProperty .
### http://www.fil.ion.ucl.ac.uk/spm/ns/#expectedNumberOfVoxelsPerCluster
spm:expectedNumberOfVoxelsPerCluster rdf:type owl:AnnotationProperty .
### http://www.fil.ion.ucl.ac.uk/spm/ns/#heightCriticalThresholdFDR05
spm:heightCriticalThresholdFDR05 rdf:type owl:AnnotationProperty .
### http://www.fil.ion.ucl.ac.uk/spm/ns/#heightCriticalThresholdFWE05
spm:heightCriticalThresholdFWE05 rdf:type owl:AnnotationProperty .
### http://www.fil.ion.ucl.ac.uk/spm/ns/#maximumIntensityProjection
spm:maximumIntensityProjection rdf:type owl:AnnotationProperty .
### http://www.fil.ion.ucl.ac.uk/spm/ns/#noiseFWHMInUnits
spm:noiseFWHMInUnits rdf:type owl:AnnotationProperty .
### http://www.fil.ion.ucl.ac.uk/spm/ns/#noiseFWHMInVoxels
spm:noiseFWHMInVoxels rdf:type owl:AnnotationProperty .
### http://www.fil.ion.ucl.ac.uk/spm/ns/#pValueFWER
spm:pValueFWER rdf:type owl:AnnotationProperty .
### http://www.fil.ion.ucl.ac.uk/spm/ns/#qValueFDR
spm:qValueFDR rdf:type owl:AnnotationProperty .
### http://www.fil.ion.ucl.ac.uk/spm/ns/#reselSize
spm:reselSize rdf:type owl:AnnotationProperty .
### http://www.fil.ion.ucl.ac.uk/spm/ns/#searchVolumeInProductOfUnits
spm:searchVolumeInProductOfUnits rdf:type owl:AnnotationProperty .
### http://www.fil.ion.ucl.ac.uk/spm/ns/#searchVolumeInResels
spm:searchVolumeInResels rdf:type owl:AnnotationProperty .
### http://www.fil.ion.ucl.ac.uk/spm/ns/#searchVolumeInVoxels
spm:searchVolumeInVoxels rdf:type owl:AnnotationProperty .
### http://www.fil.ion.ucl.ac.uk/spm/ns/#searchVolumeReselsGeometry
spm:searchVolumeReselsGeometry rdf:type owl:AnnotationProperty .
### http://www.fil.ion.ucl.ac.uk/spm/ns/#smallestSignifClusterSizeInVoxelsFDR05
spm:smallestSignifClusterSizeInVoxelsFDR05 rdf:type owl:AnnotationProperty .
### http://www.fil.ion.ucl.ac.uk/spm/ns/#smallestSignifClusterSizeInVoxelsFWE05
spm:smallestSignifClusterSizeInVoxelsFWE05 rdf:type owl:AnnotationProperty .
### http://www.fil.ion.ucl.ac.uk/spm/ns/#userSpecifiedThresholdType
spm:userSpecifiedThresholdType rdf:type owl:AnnotationProperty .
### http://www.w3.org/2000/10/swap/crypto#sha
crypto:sha rdf:type owl:AnnotationProperty .
### http://www.w3.org/ns/prov#atLocation
prov:atLocation rdf:type owl:AnnotationProperty .
### http://www.w3.org/ns/prov#hadMember
prov:hadMember rdf:type owl:AnnotationProperty .
### http://www.w3.org/ns/prov#used
prov:used rdf:type owl:AnnotationProperty .
### http://www.w3.org/ns/prov#value
prov:value rdf:type owl:AnnotationProperty .
### http://www.w3.org/ns/prov#wasAssociatedWith
prov:wasAssociatedWith rdf:type owl:AnnotationProperty .
### http://www.w3.org/ns/prov#wasDerivedFrom
prov:wasDerivedFrom rdf:type owl:AnnotationProperty .
### http://www.w3.org/ns/prov#wasGeneratedBy
prov:wasGeneratedBy rdf:type owl:AnnotationProperty .
#################################################################
#
# Classes
#
#################################################################
### http://nidm.nidash.org/betaMap
nidm:betaMap rdf:type owl:Class ;
rdfs:subClassOf prov:Entity .
### http://nidm.nidash.org/contrast
nidm:contrast rdf:type owl:Class ;
rdfs:subClassOf prov:Entity .
### http://nidm.nidash.org/contrastMap
nidm:contrastMap rdf:type owl:Class ;
rdfs:subClassOf prov:Entity .
### http://nidm.nidash.org/contrastStandardErrorMap
nidm:contrastStandardErrorMap rdf:type owl:Class ;
rdfs:subClassOf prov:Entity .
### http://nidm.nidash.org/coordinate
nidm:coordinate rdf:type owl:Class ;
rdfs:subClassOf prov:Entity ,
prov:Location .
### http://nidm.nidash.org/coordinateSpace
nidm:coordinateSpace rdf:type owl:Class ;
rdfs:subClassOf prov:Entity .
### http://nidm.nidash.org/data
nidm:data rdf:type owl:Class ;
rdfs:subClassOf prov:Entity .
### http://nidm.nidash.org/designMatrix
nidm:designMatrix rdf:type owl:Class ;
rdfs:subClassOf prov:Entity .
### http://nidm.nidash.org/extentThreshold
nidm:extentThreshold rdf:type owl:Class ;
rdfs:subClassOf prov:Entity .
### http://nidm.nidash.org/firstLevelMeanBOLDIntensity
nidm:firstLevelMeanBOLDIntensity rdf:type owl:Class ;
rdfs:subClassOf prov:Entity .
### http://nidm.nidash.org/heightThreshold
nidm:heightThreshold rdf:type owl:Class ;
rdfs:subClassOf prov:Entity .
### http://nidm.nidash.org/maskMap
nidm:maskMap rdf:type owl:Class ;
rdfs:subClassOf prov:Entity .
### http://nidm.nidash.org/modelEstimationInputs
nidm:modelEstimationInputs rdf:type owl:Class ;
rdfs:subClassOf prov:Collection .
### http://nidm.nidash.org/residualMeanSquaresMap
nidm:residualMeanSquaresMap rdf:type owl:Class ;
rdfs:subClassOf prov:Entity .
### http://nidm.nidash.org/spm
nidm:spm rdf:type owl:Class ;
rdfs:subClassOf prov:SoftwareAgent .
### http://nidm.nidash.org/statisticalMap
nidm:statisticalMap rdf:type owl:Class ;
rdfs:subClassOf prov:Entity .
### http://nidm.nidash.org/subVolumeMask
nidm:subVolumeMask rdf:type owl:Class ;
rdfs:subClassOf prov:Entity .
### http://www.fil.ion.ucl.ac.uk/spm/ns/#clusterLevelStatistic
spm:clusterLevelStatistic rdf:type owl:Class ;
rdfs:subClassOf prov:Entity .
### http://www.fil.ion.ucl.ac.uk/spm/ns/#contrast
spm:contrast rdf:type owl:Class ;
rdfs:subClassOf prov:Activity .
### http://www.fil.ion.ucl.ac.uk/spm/ns/#estimation
spm:estimation rdf:type owl:Class ;
rdfs:subClassOf prov:Activity .
### http://www.fil.ion.ucl.ac.uk/spm/ns/#excursionSet
spm:excursionSet rdf:type owl:Class ;
rdfs:subClassOf prov:Entity .
### http://www.fil.ion.ucl.ac.uk/spm/ns/#inference
spm:inference rdf:type owl:Class ;
rdfs:subClassOf prov:Activity .
### http://www.fil.ion.ucl.ac.uk/spm/ns/#peakLevelStatistic
spm:peakLevelStatistic rdf:type owl:Class ;
rdfs:subClassOf prov:Entity .
### http://www.fil.ion.ucl.ac.uk/spm/ns/#reselsPerVoxelMap
spm:reselsPerVoxelMap rdf:type owl:Class ;
rdfs:subClassOf prov:Entity .
### http://www.fil.ion.ucl.ac.uk/spm/ns/#setLevelStatistic
spm:setLevelStatistic rdf:type owl:Class ;
rdfs:subClassOf prov:Entity .
### http://www.fil.ion.ucl.ac.uk/spm/ns/#standardError
spm:standardError rdf:type owl:Class ;
rdfs:subClassOf prov:Entity .
### http://www.fil.ion.ucl.ac.uk/spm/ns/#statisticImageProperties
spm:statisticImageProperties rdf:type owl:Class ;
rdfs:subClassOf prov:Entity .
### http://www.w3.org/ns/prov#Activity
prov:Activity rdf:type owl:Class .
### http://www.w3.org/ns/prov#Agent
prov:Agent rdf:type owl:Class .
### http://www.w3.org/ns/prov#Collection
prov:Collection rdf:type owl:Class .
### http://www.w3.org/ns/prov#Entity
prov:Entity rdf:type owl:Class .
### http://www.w3.org/ns/prov#Location
prov:Location rdf:type owl:Class .
### http://www.w3.org/ns/prov#SoftwareAgent
prov:SoftwareAgent rdf:type owl:Class .
#################################################################
#
# Individuals
#
#################################################################
### http://iri.nidash.org/beta_map_id_1
niiri:beta_map_id_1 rdf:type nidm:betaMap ,
owl:NamedIndividual ,
prov:Entity ;
rdfs:label "Beta Map 1" ;
nidm:fileName "beta_0001.img"^^xsd:string ;
crypto:sha "e43b6e01b0463fe7d40782137867a..."^^xsd:string ;
prov:atLocation "file:///path/to/beta_0001.img"^^xsd:anyURI ;
nidm:coordinateSpace niiri:coordinate_space_id_1 ;
prov:wasGeneratedBy niiri:model_fitting_id .
### http://iri.nidash.org/beta_map_id_2
niiri:beta_map_id_2 rdf:type nidm:betaMap ,
owl:NamedIndividual ,
prov:Entity ;
rdfs:label "Beta Map 2" ;
nidm:fileName "beta_0002.img"^^xsd:string ;
crypto:sha "e43b6e01b0463fe7d40782137867a..."^^xsd:string ;
prov:atLocation "file:///path/to/beta_0002.img"^^xsd:anyURI ;
nidm:coordinateSpace niiri:coordinate_space_id_1 ;
prov:wasGeneratedBy niiri:model_fitting_id .
### http://iri.nidash.org/cluster_0001
niiri:cluster_0001 rdf:type spm:clusterLevelStatistic ,
owl:NamedIndividual ,
prov:Entity ;
rdfs:label "Cluster Level Statistic: 0001" ;
spm:qValueFDR "0.0"^^xsd:float ;
nidm:pValueUncorrected "0.0"^^xsd:float ;
spm:pValueFWER "0.0"^^xsd:float ;
nidm:labelId "1"^^xsd:int ;
spm:clusterSizeInResels "23.120918"^^xsd:float ;
nidm:clusterSizeInVoxels "530"^^xsd:int ;
prov:wasDerivedFrom niiri:set_level_statistic_id .
### http://iri.nidash.org/cluster_0002
niiri:cluster_0002 rdf:type spm:clusterLevelStatistic ,
owl:NamedIndividual ,
prov:Entity ;
rdfs:label "Cluster Level Statistic: 0002" ;
nidm:pValueUncorrected "0.0"^^xsd:float ;
spm:pValueFWER "0.0"^^xsd:float ;
spm:qValueFDR "1.4E-45"^^xsd:float ;
spm:clusterSizeInResels "19.412848"^^xsd:float ;
nidm:labelId "2"^^xsd:int ;
nidm:clusterSizeInVoxels "445"^^xsd:int ;
prov:wasDerivedFrom niiri:set_level_statistic_id .
### http://iri.nidash.org/cluster_0003
niiri:cluster_0003 rdf:type spm:clusterLevelStatistic ,
owl:NamedIndividual ,
prov:Entity ;
rdfs:label "Cluster Level Statistic: 0003" ;
spm:pValueFWER "1.3923795E-10"^^xsd:float ;
nidm:pValueUncorrected "1.5659264E-9"^^xsd:float ;
spm:clusterSizeInResels "1.6577263"^^xsd:float ;
nidm:labelId "3"^^xsd:int ;
nidm:clusterSizeInVoxels "38"^^xsd:int ;
spm:qValueFDR "4.1758037E-9"^^xsd:float ;
prov:wasDerivedFrom niiri:set_level_statistic_id .
### http://iri.nidash.org/contrast_estimation_id
niiri:contrast_estimation_id rdf:type spm:contrast ,
owl:NamedIndividual ,
prov:Activity ;
rdfs:label "Contrast estimation" ;
prov:used niiri:beta_map_id_1 ,
niiri:beta_map_id_2 ,
niiri:contrast_id ,
niiri:design_matrix_id ,
niiri:mask_id_2 ,
niiri:residual_mean_squares_map_id ;
prov:wasAssociatedWith niiri:software_id .
### http://iri.nidash.org/contrast_id
niiri:contrast_id rdf:type nidm:contrast ,
owl:NamedIndividual ,
prov:Entity ;
rdfs:label "Contrast: Listening > Rest" ;
prov:value "[1, 0, 0]"^^xsd:string ;
nidm:contrastName "listening > rest"^^xsd:string ;
nidm:statisticType nidm:tStatistic .
### http://iri.nidash.org/contrast_map_id
niiri:contrast_map_id rdf:type nidm:contrastMap ,
owl:NamedIndividual ,
prov:Entity ;
rdfs:label "Contrast Map: listening > rest" ;
nidm:fileName "con_0001.img"^^xsd:string ;
crypto:sha "e43b6e01b0463fe7d40782137867a..."^^xsd:string ;
prov:atLocation "file:///path/to/con_0001.img"^^xsd:anyURI ;
nidm:contrastName "listening > rest"^^xsd:string ;
prov:wasGeneratedBy niiri:contrast_estimation_id ;
nidm:coordinateSpace niiri:coordinate_space_id_1 .
### http://iri.nidash.org/contrast_standard_error_map_id
niiri:contrast_standard_error_map_id rdf:type nidm:contrastStandardErrorMap ,
spm:standardError ,
owl:NamedIndividual ,
prov:Entity ;
rdfs:label "Contrast Standard Error Map" ;
nidm:fileName "contrastSE.nii"^^xsd:string ;
crypto:sha "e43b6e01b0463fe7d40782137867a..."^^xsd:string ;
prov:atLocation "file:///path/to/contrastSE.nii"^^xsd:anyURI ;
prov:wasGeneratedBy niiri:contrast_estimation_id ;
nidm:coordinateSpace niiri:coordinate_space_id_1 .
### http://iri.nidash.org/coordinate_0001
niiri:coordinate_0001 rdf:type nidm:coordinate ,
owl:NamedIndividual ,
prov:Entity ,
prov:Location ;
rdfs:label "Coordinate: 0001" ;
nidm:coordinate2 "-28.0"^^xsd:float ;
nidm:coordinate1 "-60.0"^^xsd:float ;
nidm:coordinate3 "13.0"^^xsd:float .
### http://iri.nidash.org/coordinate_0002
niiri:coordinate_0002 rdf:type nidm:coordinate ,
owl:NamedIndividual ,
prov:Entity ,
prov:Location ;
rdfs:label "Coordinate: 0002" ;
nidm:coordinate2 "-13.0"^^xsd:float ;
nidm:coordinate1 "-66.0"^^xsd:float ;
nidm:coordinate3 "4.0"^^xsd:float .
### http://iri.nidash.org/coordinate_0003
niiri:coordinate_0003 rdf:type nidm:coordinate ,
owl:NamedIndividual ,
prov:Entity ,
prov:Location ;
rdfs:label "Coordinate: 0003" ;
nidm:coordinate3 "-2.0"^^xsd:float ;
nidm:coordinate1 "-63.0"^^xsd:float ;
nidm:coordinate2 "-7.0"^^xsd:float .
### http://iri.nidash.org/coordinate_0004
niiri:coordinate_0004 rdf:type nidm:coordinate ,
owl:NamedIndividual ,
prov:Entity ,
prov:Location ;
rdfs:label "Coordinate: 0004" ;
nidm:coordinate2 "-22.0"^^xsd:float ;
nidm:coordinate3 "13.0"^^xsd:float ;
nidm:coordinate1 "57.0"^^xsd:float .
### http://iri.nidash.org/coordinate_0005
niiri:coordinate_0005 rdf:type nidm:coordinate ,
owl:NamedIndividual ,
prov:Entity ,
prov:Location ;
rdfs:label "Coordinate: 0005" ;
nidm:coordinate2 "-13.0"^^xsd:float ;
nidm:coordinate3 "-2.0"^^xsd:float ;
nidm:coordinate1 "66.0"^^xsd:float .
### http://iri.nidash.org/coordinate_0006
niiri:coordinate_0006 rdf:type nidm:coordinate ,
owl:NamedIndividual ,
prov:Entity ,
prov:Location ;
rdfs:label "Coordinate: 0006" ;
nidm:coordinate2 "-40.0"^^xsd:float ;
nidm:coordinate1 "57.0"^^xsd:float ;
nidm:coordinate3 "7.0"^^xsd:float .
### http://iri.nidash.org/coordinate_0007
niiri:coordinate_0007 rdf:type nidm:coordinate ,
owl:NamedIndividual ,
prov:Entity ,
prov:Location ;
rdfs:label "Coordinate: 0007" ;
nidm:coordinate3 "-14.0"^^xsd:float ;
nidm:coordinate2 "-31.0"^^xsd:float ;
nidm:coordinate1 "36.0"^^xsd:float .
### http://iri.nidash.org/coordinate_space_id_1
niiri:coordinate_space_id_1 rdf:type nidm:coordinateSpace ,
owl:NamedIndividual ,
prov:Entity ;
rdfs:label "Coordinate space 1" ;
nidm:numberOfDimensions "3"^^xsd:int ;
nidm:voxelUnits "['mm', 'mm', 'mm']"^^xsd:string ;
nidm:voxelSize "[3, 3, 3]"^^xsd:string ;
nidm:dimensions "[53,63,46]"^^xsd:string ;
nidm:voxelToWorldMapping "[[-3, 0, 0, 78],[0, 3, 0, -112],[0, 0, 3, -50],[0, 0, 0, 1]]"^^xsd:string ;
nidm:coordinateSystem nidm:mniCoordinateSystem .
### http://iri.nidash.org/coordinate_space_id_2
niiri:coordinate_space_id_2 rdf:type nidm:coordinateSpace ,
owl:NamedIndividual ,
prov:Entity ;
rdfs:label "Coordinate space 2" ;
nidm:numberOfDimensions "3"^^xsd:int ;
nidm:voxelUnits "['mm', 'mm', 'mm']"^^xsd:string ;
nidm:voxelSize "[3, 3, 3]"^^xsd:string ;
nidm:dimensions "[53,63,46]"^^xsd:string ;
nidm:voxelToWorldMapping "[[-3, 0, 0, 78],[0, 3, 0, -112],[0, 0, 3, -50],[0, 0, 0, 1]]"^^xsd:string ;
nidm:coordinateSystem nidm:mniCoordinateSystem .
### http://iri.nidash.org/data_id
niiri:data_id rdf:type nidm:data ,
owl:NamedIndividual ,
prov:Entity ;
rdfs:label "Data" ;
crypto:sha "e43b6e01b0463fe7d40782137867a..."^^xsd:string ;
prov:atLocation "file:///path/to/sd_0001.nii.gz"^^xsd:anyURI ;
nidm:fileName "sd_0001.nii.gz"^^xsd:string .
### http://iri.nidash.org/design_matrix_id
niiri:design_matrix_id rdf:type nidm:designMatrix ,
owl:NamedIndividual ,
prov:Entity ;
rdfs:label "Design Matrix" ;
nidm:fileName "design_matrix.csv"^^xsd:string ;
prov:atLocation "file:///path/to/design_matrix.csv"^^xsd:anyURI ;
nidm:visualisation "file:///path/to/design_matrix.png"^^xsd:anyURI .