Installation issue

[apal6]

Hi,

I am trying to install warpy application using following the tutorial. I don't think it finished the installation.

Here is the the log;

`------ Warpy Installer Script -------------
This batch file downloads and install Warpy components on your computer
See https://imagej.net/plugins/bdv/warpy/warpy
------- Installation path validation
Your OS: Mac OSX
Please enter the installation path (windows: C:/, mac: /Applications/, Linux : /home/user/abba)
The directory must exist first
Path: /Applications/
All components will be installed in:
/Applications/

• Latest ImageJ/Fiji
  • Update Fiji
  • Enable Bigdataviewer-Playground Update Site
• QuPath version: 0.5.1
• Elastix version: 5.0.1
• Warpy QuPath Extension: 0.3.1
  ------ Setting up ImageJ/Fiji ------
  Looking for Fiji executable: /Applications//Fiji.app/Contents/MacOS/ImageJ-macosx
  Fiji detected, bypassing installation
  Fiji successfully installed.
  Updating Fiji
  The operation couldn’t be completed. Unable to locate a Java Runtime that supports (null).
  Please visit http://www.java.com for information on installing Java.

The operation couldn’t be completed. Unable to locate a Java Runtime that supports (null).
Please visit http://www.java.com for information on installing Java.

Done: Checksummer
[WARNING] Skipping Contents/Info.plist
Done: Downloading...
Done: Downloading...
Fiji updated
Enabling PTBIOP update site
The operation couldn’t be completed. Unable to locate a Java Runtime that supports (null).
Please visit http://www.java.com for information on installing Java.

The operation couldn’t be completed. Unable to locate a Java Runtime that supports (null).
Please visit http://www.java.com for information on installing Java.

Done: Checksummer
[ERROR] Site 'PTBIOP' was already added!
PTBIOP update site enabled
Updating Fiji
The operation couldn’t be completed. Unable to locate a Java Runtime that supports (null).
Please visit http://www.java.com for information on installing Java.

The operation couldn’t be completed. Unable to locate a Java Runtime that supports (null).
Please visit http://www.java.com for information on installing Java.

Done: Checksummer
[WARNING] Skipping Contents/Info.plist
Done: Downloading...
Done: Downloading...
Fiji updated
Updating Fiji one last time
The operation couldn’t be completed. Unable to locate a Java Runtime that supports (null).
Please visit http://www.java.com for information on installing Java.

The operation couldn’t be completed. Unable to locate a Java Runtime that supports (null).
Please visit http://www.java.com for information on installing Java.

Done: Checksummer
[WARNING] Skipping Contents/Info.plist
Done: Downloading...
Done: Downloading...
Fiji is now up-to-date
------ Setting up Elastix ------
Elastix detected, bypassing installation
Elastix successfully installed.
--- Setting Elastix and Transformix path in Fiji
The operation couldn’t be completed. Unable to locate a Java Runtime that supports (null).
Please visit http://www.java.com for information on installing Java.

The operation couldn’t be completed. Unable to locate a Java Runtime that supports (null).
Please visit http://www.java.com for information on installing Java.

[WARNING] 1 exceptions occurred during plugin discovery.
--- Setting global cache
Global cache set to 1616 Mb, out of 3233 Mb available (50%)
[WARN] Overriding action BDV - Set BDV window (biop)
[INFO] Overriding BIOP Run Macro...; identifier: command:ch.epfl.biop.macrorunner.B_Run_Macro; jar: file:/Applications/Fiji.app/plugins/BIOP/B_Run_Macro-1.0.0-SNAPSHOT.jar
[bash -c C:/Users/username/.conda/envs/cellpose/bin/python -m cellpose --help]
bash: C:/Users/username/.conda/envs/cellpose/bin/python: No such file or directory
Runner C:/Users/username/.conda/envs/cellpose exited with value 127. Please check output above for indications of the problem.
java.nio.file.NoSuchFileException: C:/Users/username/.conda/envs/deepslice/deepslice_cli_v1.1.5.1.py
at sun.nio.fs.UnixException.translateToIOException(UnixException.java:86)
at sun.nio.fs.UnixException.rethrowAsIOException(UnixException.java:102)
at sun.nio.fs.UnixException.rethrowAsIOException(UnixException.java:107)
at sun.nio.fs.UnixFileSystemProvider.newByteChannel(UnixFileSystemProvider.java:214)
at java.nio.file.spi.FileSystemProvider.newOutputStream(FileSystemProvider.java:434)
at java.nio.file.Files.newOutputStream(Files.java:216)
at java.nio.file.Files.copy(Files.java:3016)
at ch.epfl.biop.wrappers.deepslice.DeepSlice.ensureScriptIsCopied(DeepSlice.java:79)
at ch.epfl.biop.wrappers.deepslice.DeepSlice.execute(DeepSlice.java:94)
at ch.epfl.biop.wrappers.deepslice.DeepSlice.execute(DeepSlice.java:184)
at ch.epfl.biop.wrappers.BiopWrappersCheck.isDeepSliceSet(BiopWrappersCheck.java:70)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:498)
at ch.epfl.biop.wrappers.BiopWrappersCheck.reportAllWrappers(BiopWrappersCheck.java:20)
at ch.epfl.biop.wrappers.ij2command.BiopWrappersSet.run(BiopWrappersSet.java:37)
at org.scijava.command.CommandModule.run(CommandModule.java:196)
at org.scijava.module.ModuleRunner.run(ModuleRunner.java:165)
at org.scijava.module.ModuleRunner.call(ModuleRunner.java:125)
at org.scijava.module.ModuleRunner.call(ModuleRunner.java:64)
at org.scijava.thread.DefaultThreadService.lambda$wrap$2(DefaultThreadService.java:247)
at java.util.concurrent.FutureTask.run(FutureTask.java:266)
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624)
at java.lang.Thread.run(Thread.java:750)
Could not copy CLI script: C:/Users/username/.conda/envs/deepslice/deepslice_cli_v1.1.5.1.py
Please try to add the script file manually
The CLI script to DeepSlice could not be copied to the env folder (C:/Users/username/.conda/envs/deepslice)
You can try to copy manually deepslice_cli_v1.1.5.1.py to this folder
[INFO] Elastix -> set :-)
Transformix -> set :-)
Cellpose -> set :-)
DeepSlice -> set :-)

------ Setting up QuPath ------
/Applications/QuPath.app/Contents/MacOS/QuPath
QuPath detected, bypassing installation
------ Setting up QuPath extension ------
The operation couldn’t be completed. Unable to locate a Java Runtime that supports (null).
Please visit http://www.java.com for information on installing Java.

The operation couldn’t be completed. Unable to locate a Java Runtime that supports (null).
Please visit http://www.java.com for information on installing Java.

[WARNING] 1 exceptions occurred during plugin discovery.
--- Setting global cache
Global cache set to 1616 Mb, out of 3233 Mb available (50%)
[WARN] Overriding action BDV - Set BDV window (biop)
[INFO] Overriding BIOP Run Macro...; identifier: command:ch.epfl.biop.macrorunner.B_Run_Macro; jar: file:/Applications/Fiji.app/plugins/BIOP/B_Run_Macro-1.0.0-SNAPSHOT.jar
/Applications//QuPath Common Data_0.5
io.github.qupath/0.5
https://github.com/BIOP/qupath-extension-warpy/releases/download/0.3.1/qupath-extension-warpy-0.3.1.zip
true
Setting java prefs because the pref may not exist
QuPath user path: /Applications/QuPath Common Data_0.5
Starting download
Download done
Unzipping extension
Unzipping done
ejml-0.24.jar
jitk-tps-3.0.2.jar
qupath-extension-warpy-0.3.1.jar
imglib2-5.12.0.jar
imglib2-realtransform-3.1.2.jar
jama-1.0.3.jar
[INFO] script:InstallQuPathExtension.groovy = [[result], [Done]]
Removing temporary download folder /Applications//temp_dl
------ INSTALLATION DONE ------
You should be able to run either Fiji or QuPath and access Warpy's functionalities
If this script failed, please post the errors in forum.image.sc

Saving session...
...copying shared history...
...saving history...truncating history files...
...completed.

[Process completed]`

Could you please help?

Thank you,
Aastha