From fbf0656bdd3f56009e10121744da2123e3f1cf9f Mon Sep 17 00:00:00 2001
From: Matthias Mittner <matthias.mittner@uit.no>
Date: Mon, 22 Mar 2021 14:46:23 +0100
Subject: [PATCH] fix blink detection

closes #15
---
 pypillometry/preproc.py | 2 ++
 1 file changed, 2 insertions(+)

diff --git a/pypillometry/preproc.py b/pypillometry/preproc.py
index f47bcba..92e177a 100644
--- a/pypillometry/preproc.py
+++ b/pypillometry/preproc.py
@@ -142,6 +142,8 @@ def detect_blinks_zero(sy, min_duration, blink_val=0):
     x=np.r_[0, np.diff((sy==blink_val).astype(np.int))]
     starts=np.where(x==1)[0]
     ends=np.where(x==-1)[0]-1
+    if sy[0]==blink_val: ## first value missing?
+        starts=np.r_[0,starts]    
     if ends.size!=starts.size: 
         ## is the first start earlier than the first end?
         if starts[0]>ends[0]: