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setup.py
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#!/usr/bin/env python
import setuptools
setuptools.setup(
use_scm_version=True,
setup_requires=['setuptools_scm', 'setuptools_scm_git_archive'],
install_requires=['setuptools_scm'],
name='MinVar',
description='Minority variants in HIV',
url='https://github.com/ozagordi/MinVar',
author='Osvaldo Zagordi',
author_email='[email protected]',
packages = setuptools.find_packages(),
scripts = ['bin/minvar', 'minvar/blast2sam.py'],
data_files = [('minvar/db',
['minvar/db/HXB2_pol_gene.fasta',
'minvar/db/HIV_consensus.fasta',
'minvar/db/HIV_cons_db.nsq',
'minvar/db/HIV_cons_db.nin',
'minvar/db/HIV_cons_db.nhr',
'minvar/db/template.tex',
'minvar/db/masterComments_RTI.txt',
'minvar/db/masterComments_PI.txt',
'minvar/db/masterComments_INI.txt',
'minvar/db/consensus_B.fna',
'minvar/db/consensus_B.faa',
'minvar/db/consensus_B.bed',
'minvar/db/HXB2_pol_gene.fasta.fai',
'minvar/db/consensus_B.fna.fai'])],
entry_points={
'console_scripts': [
'minvar = minvar.__main__:main'
]
}
)