DESCRIPTION

Package: curatedTCGAData
Type: Package
Title: Curated Data From The Cancer Genome Atlas (TCGA) as MultiAssayExperiment
    Objects
Version: 0.99.56
Author: Marcel Ramos <marcel.ramos@roswellpark.org>,
    Levi Waldron <lwaldron.research@gmail.com>,
    Lucas Schiffer <schiffer.lucas@gmail.com>,
    Valerie Obenchain <valerie.obenchain@roswellpark.org>,
    Morgan Martin <martin.morgan@roswellpark.org>
Maintainer: Marcel Ramos <marcel.ramos@roswellpark.org>
Description: This package provides publicly available data from The Cancer
    Genome Atlas (TCGA) Bioconductor MultiAssayExperiment class objects. These
    objects integrate multiple assays (e.g. RNA-seq, copy number, mutation,
    microRNA, protein, and others) with clinical / pathological data. The
    MultiAssayExperiment class links assay barcodes with patient IDs, enabling
    harmonized subsetting of rows (features) and columns (patients / samples)
    across the entire experiment.
License: Artistic-2.0
Depends:
    R (>= 3.2.0),
    ExperimentHub,
    ExperimentHubData
Imports:
    MultiAssayExperiment,
    utils
Suggests:
    BiocCheck,
    BiocInstaller,
    BiocParallel,
    BiocStyle,
    dplyr,
    knitr,
    RaggedExperiment,
    readr,
    rmarkdown,
    S4Vectors,
    testthat
VignetteBuilder: knitr
biocViews: Homo_sapiens_Data, ReproducibleResearch, CancerData
LazyData: true
LazyLoad: yes
RoxygenNote: 6.0.1