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Installation

From your terminal, run the following commands sequentially

# Clone git repo && create a new env with required libraries
git clone https://github.com/hpi-sam/GNN-SpaceTimeGraphs.git
cd GNN-SpaceTimeGraphs
conda env create -f environment.yml
conda activate gnn-env

# Download the metr-la and pems-bay data from 
# https://drive.google.com/file/d/1wD-mHlqAb2mtHOe_68fZvDh1LpDegMMq/view?usp=sharing
export fileid=1pAGRfzMx6K9WWsfDcD1NMbIif0T0saFC
export filename=data/metr_la/metr-la.h5
wget -O $filename 'https://drive.google.com/uc?export=download&id='$fileid

export fileid=1wD-mHlqAb2mtHOe_68fZvDh1LpDegMMq
export filename=data/pems_bay/pems-bay.h5
wget -O $filename 'https://drive.google.com/uc?export=download&id='$fileid

# Run utils script to process the data that is going to be used
python utils.py --output_dir=data/metr_la \
                    --traffic_df_filename=data/metr_la/metr-la.h5 --sts=True
python utils.py --output_dir=data/metr_la \
                    --traffic_df_filename=data/metr_la/metr-la.h5
python utils.py --output_dir=data/metr_la \
                    --traffic_df_filename=data/pems_bay/pems-bay.h5 --sts=True
python utils.py --output_dir=data/metr_la \
                    --traffic_df_filename=data/pems_bay/pems-bay.h5

If you find any problems with wget [...], you can manually download the datasets from this repo

To train a model, run the following command from the GNN-SpaceTimeGraphs folder

python run.py -c configs/p3d.yml --toy_data