Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Error in check_breaks_labels(): upset() now fails basic ggplot2 checks #235

Open
smped opened this issue Jul 26, 2022 · 0 comments
Open

Comments

@smped
Copy link

smped commented Jul 26, 2022

I fear that this may be the end of UpSetR's compatibility with external packages. Plotting using fromList() no longer works and instead spits an error. Here's my Minimal Reprex

library(tidyverse)
library(UpSetR)
ex <- list(x = letters[1:10], y = letters[c(6:15, 26)],  z = letters[c(2, 10:25)])
df <- fromList(ex)
upset(df)
Error in `check_breaks_labels()`:
! `breaks` and `labels` must have the same length
Run `rlang::last_error()` to see where the error occurred.

Proceeding as advised

rlang::last_error()
<error/rlang_error>
Error in `check_breaks_labels()`:
! `breaks` and `labels` must have the same length
---
Backtrace:
 1. UpSetR::upset(df)
 2. UpSetR:::Make_matrix_plot(...)
 3. ggplot2::scale_y_continuous(...)
 4. ggplot2::continuous_scale(...)
 5. ggplot2:::check_breaks_labels(breaks, labels)
Run `rlang::last_trace()` to see the full context.

And the sessionInfo() output

sessionInfo()
R version 4.2.1 (2022-06-23)
Platform: x86_64-pc-linux-gnu (64-bit)
Running under: Ubuntu 20.04.4 LTS

Matrix products: default
BLAS:   /usr/lib/x86_64-linux-gnu/blas/libblas.so.3.9.0
LAPACK: /usr/lib/x86_64-linux-gnu/lapack/liblapack.so.3.9.0

locale:
 [1] LC_CTYPE=en_AU.UTF-8       LC_NUMERIC=C               LC_TIME=en_AU.UTF-8        LC_COLLATE=en_AU.UTF-8     LC_MONETARY=en_AU.UTF-8    LC_MESSAGES=en_AU.UTF-8   
 [7] LC_PAPER=en_AU.UTF-8       LC_NAME=C                  LC_ADDRESS=C               LC_TELEPHONE=C             LC_MEASUREMENT=en_AU.UTF-8 LC_IDENTIFICATION=C       

attached base packages:
[1] stats     graphics  grDevices utils     datasets  methods   base     

other attached packages:
 [1] UpSetR_1.4.0    forcats_0.5.1   stringr_1.4.0   dplyr_1.0.9     purrr_0.3.4     readr_2.1.2     tidyr_1.2.0     tibble_3.1.7    ggplot2_3.3.6   tidyverse_1.3.1

loaded via a namespace (and not attached):
 [1] Rcpp_1.0.8.3     plyr_1.8.7       cellranger_1.1.0 pillar_1.7.0     compiler_4.2.1   dbplyr_2.1.1     tools_4.2.1      digest_0.6.29    jsonlite_1.8.0   lubridate_1.8.0 
[11] lifecycle_1.0.1  gtable_0.3.0     pkgconfig_2.0.3  rlang_1.0.2      reprex_2.0.1     rstudioapi_0.13  DBI_1.1.2        cli_3.3.0        haven_2.5.0      gridExtra_2.3   
[21] xml2_1.3.3       withr_2.5.0      httr_1.4.3       fs_1.5.2         generics_0.1.2   vctrs_0.4.1      hms_1.1.1        grid_4.2.1       tidyselect_1.1.2 glue_1.6.2      
[31] R6_2.5.1         fansi_1.0.3      readxl_1.4.0     farver_2.1.0     tzdb_0.3.0       modelr_0.1.8     magrittr_2.0.3   backports_1.4.1  scales_1.2.0     ellipsis_0.3.2  
[41] rvest_1.0.2      assertthat_0.2.1 colorspace_2.0-3 labeling_0.4.2   utf8_1.2.2       stringi_1.7.6    munsell_0.5.0    broom_0.8.0      crayon_1.5.1    
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

No branches or pull requests

1 participant