From b0cb55e19cc5438b93cd81ee7742e75f4ac3290c Mon Sep 17 00:00:00 2001
From: Henry Pinkard <7969470+henrypinkard@users.noreply.github.com>
Date: Thu, 24 Aug 2023 12:52:14 -0700
Subject: [PATCH 1/3] fix function for shutting down headless process

---
 pycromanager/_version.py      | 2 +-
 pycromanager/acq_util.py      | 5 +++--
 pycromanager/test/conftest.py | 2 +-
 3 files changed, 5 insertions(+), 4 deletions(-)

diff --git a/pycromanager/_version.py b/pycromanager/_version.py
index df280057..0a56e4ce 100644
--- a/pycromanager/_version.py
+++ b/pycromanager/_version.py
@@ -1,2 +1,2 @@
-version_info = (0, 27, 5)
+version_info = (0, 28, 0)
 __version__ = ".".join(map(str, version_info))
diff --git a/pycromanager/acq_util.py b/pycromanager/acq_util.py
index c0b3152e..fd2c01a8 100644
--- a/pycromanager/acq_util.py
+++ b/pycromanager/acq_util.py
@@ -11,13 +11,14 @@
 
 SUBPROCESSES = []
 
-def cleanup():
+def stop_headless():
     for p in SUBPROCESSES:
         p.terminate()
         p.wait()  # wait for process to terminate
+    SUBPROCESSES.clear()
 
 # make sure any Java processes are cleaned up when Python exits
-atexit.register(cleanup)
+atexit.register(stop_headless)
 
 def start_headless(
     mm_app_path: str, config_file: str='', java_loc: str=None, core_log_path: str='',
diff --git a/pycromanager/test/conftest.py b/pycromanager/test/conftest.py
index ca6aef1c..5fe3cf84 100644
--- a/pycromanager/test/conftest.py
+++ b/pycromanager/test/conftest.py
@@ -10,7 +10,7 @@
 
 import pycromanager
 from pycromanager import start_headless
-from pycromanager.acq_util import cleanup
+from pycromanager.acq_util import stop_headless
 import socket
 
 def is_port_in_use(port):

From d152a994155ee04f48f5b602bf5bb89515b1d02b Mon Sep 17 00:00:00 2001
From: AcqEngJ-Bot <41898282+github-actions[bot]@users.noreply.github.com>
Date: Thu, 24 Aug 2023 20:27:54 +0000
Subject: [PATCH 2/3] update AcqEngJ version and PycroManagerJava version
 (Created by Github action)

---
 java/pom.xml | 4 ++--
 1 file changed, 2 insertions(+), 2 deletions(-)

diff --git a/java/pom.xml b/java/pom.xml
index d9d4b426..e230a39c 100644
--- a/java/pom.xml
+++ b/java/pom.xml
@@ -2,7 +2,7 @@
     <modelVersion>4.0.0</modelVersion>
     <groupId>org.micro-manager.pycro-manager</groupId>
     <artifactId>PycroManagerJava</artifactId>
-     <version>0.41.9</version>
+     <version>0.41.10</version>
     <packaging>jar</packaging>
     <name>Pycro-Manager Java</name>
     <description>The Java components of Pycro-Manager</description>
@@ -54,7 +54,7 @@
       <dependency>
          <groupId>org.micro-manager.acqengj</groupId>
          <artifactId>AcqEngJ</artifactId>
-     <version>0.32.0</version>
+     <version>0.32.1</version>
       </dependency>
       <dependency>
          <groupId>org.micro-manager.ndviewer</groupId>

From c81eba135ea859caa5a4cfbc81824d3eee23eef0 Mon Sep 17 00:00:00 2001
From: AcqEngJ-Bot <41898282+github-actions[bot]@users.noreply.github.com>
Date: Thu, 24 Aug 2023 21:10:17 +0000
Subject: [PATCH 3/3] update AcqEngJ version and PycroManagerJava version
 (Created by Github action)

---
 java/pom.xml | 4 ++--
 1 file changed, 2 insertions(+), 2 deletions(-)

diff --git a/java/pom.xml b/java/pom.xml
index e230a39c..ea0057dd 100644
--- a/java/pom.xml
+++ b/java/pom.xml
@@ -2,7 +2,7 @@
     <modelVersion>4.0.0</modelVersion>
     <groupId>org.micro-manager.pycro-manager</groupId>
     <artifactId>PycroManagerJava</artifactId>
-     <version>0.41.10</version>
+     <version>0.41.11</version>
     <packaging>jar</packaging>
     <name>Pycro-Manager Java</name>
     <description>The Java components of Pycro-Manager</description>
@@ -54,7 +54,7 @@
       <dependency>
          <groupId>org.micro-manager.acqengj</groupId>
          <artifactId>AcqEngJ</artifactId>
-     <version>0.32.1</version>
+     <version>0.32.2</version>
       </dependency>
       <dependency>
          <groupId>org.micro-manager.ndviewer</groupId>