From 41aefdac6bc568ce55034e11529dda3d2ace5428 Mon Sep 17 00:00:00 2001 From: Kay Robbins <1189050+VisLab@users.noreply.github.com> Date: Tue, 12 Sep 2023 06:22:54 -0500 Subject: [PATCH 1/2] Updated whats new with preprint info --- docs/source/WhatsNew.md | 6 ++++++ hedcode/matlab_scripts/web_services/runAllTests.m | 5 +++-- 2 files changed, 9 insertions(+), 2 deletions(-) diff --git a/docs/source/WhatsNew.md b/docs/source/WhatsNew.md index e4b1d90..c242fc0 100644 --- a/docs/source/WhatsNew.md +++ b/docs/source/WhatsNew.md @@ -6,6 +6,12 @@ > Half-day workshop at [**INCF Assembly 2023**](https://neuroinformatics.incf.org/register). > Speakers: Scott Makeig, Dung Truong, Dora Hermes, and Monique Dennisen. +**September 12, 2023**: **New HED preprint on events in context** +> *Events in context - A framework for the study of brain, experience and behavior* +> by Scott Makeig (UCSD) and Kay Robbins (UTSA) +> **Preprint**: [**https://psyarxiv.com/e7jbm**](https://psyarxiv.com/e7jbm) +> DOI: 10.31234/osf.io/e7jbm + **August 21, 2023**: **INCF 2022 HED workshop videos available** > [**Part 1: Documenting temporal structure** (48:04)](https://youtu.be/cCp314DXMos) > [**Part 2: Annotating a BIDS dataset** (59:58)](https://youtu.be/BBiGNMyY3x8) diff --git a/hedcode/matlab_scripts/web_services/runAllTests.m b/hedcode/matlab_scripts/web_services/runAllTests.m index 2bb0b1b..b610fbf 100644 --- a/hedcode/matlab_scripts/web_services/runAllTests.m +++ b/hedcode/matlab_scripts/web_services/runAllTests.m @@ -1,6 +1,7 @@ +host = 'https://hedtools.org/hed'; %host = 'https://hedtools.org/hed_dev'; -%host = 'https://hedtools.org/hed'; -host = 'http://127.0.0.1:5000'; +%host = 'http://127.0.0.1:5000'; + errorMap = containers.Map('KeyType', 'char', 'ValueType', 'any'); errorMap('testGetServices') = testGetServices(host); From 9b68324509b4b75e4210ab8be8049174689ca686 Mon Sep 17 00:00:00 2001 From: Kay Robbins <1189050+VisLab@users.noreply.github.com> Date: Tue, 12 Sep 2023 06:31:30 -0500 Subject: [PATCH 2/2] Updated document summary --- docs/source/DocumentationSummary.md | 25 ++++++++++++++++--------- 1 file changed, 16 insertions(+), 9 deletions(-) diff --git a/docs/source/DocumentationSummary.md b/docs/source/DocumentationSummary.md index e0859ea..7849048 100644 --- a/docs/source/DocumentationSummary.md +++ b/docs/source/DocumentationSummary.md @@ -1,9 +1,9 @@ # Documentation summary -## 1. HED publications +## HED publications -### 1.1. Journal articles +### Journal articles Explanation of the history, development, and motivation for third generation HED: @@ -19,7 +19,14 @@ Detailed case study in using HED-3G for tagging: > NeuroImage Special Issue Practice in MEEG. NeuroImage 245 (2021) 118766. > [https://www.sciencedirect.com/science/article/pii/S1053811921010387](https://www.sciencedirect.com/science/article/pii/S1053811921010387). -### 1.2. Book chapters +Framework for annotating and analyzing events in context: + +> Makeig, S. and K. Robbins (2023 under review). +> Events in context - A framework for the study of brain, experience and behavior. +> **Preprint**: [**https://psyarxiv.com/e7jbm**](https://psyarxiv.com/e7jbm) +> DOI: 10.31234/osf.io/e7jbm + +### Book chapters > Truong, D., Robbins, K., Delorme, A., and S. Makeig (in press). > End-to-end processing of M/EEG data with BIDS, HED, and EEGLAB. @@ -44,7 +51,7 @@ The `.mediawiki` sources can be viewed on the [**hed-schemas](https://github.com/hed-standard/hed-schemas) GitHub repository using GitHub's default markdown viewer. -## 3. HED Websites +## HED Websites The following is a summary of the HED-related websites: @@ -55,7 +62,7 @@ The following is a summary of the HED-related websites: * - Description - Site -* - HED organization website +* - HED project homepage - [https://www.hedtags.org](https://www.hedtags.org) * - HED resources - [https://www.hed-resources.org](https://www.hed-resources.org) @@ -94,19 +101,19 @@ The following is a summary of the HED-related websites: ````` -## 4. HED working documents +## HED working documents Mapping of HED terms and their descriptions to known ontologies is: -> HED-3G Working Document on Ontology mapping +> HED-3G Working Document on Ontology mapping > [https://drive.google.com/file/d/13y17OwwNBlHdhB7hguSmOBdxn0Uk4hsI/view?usp=sharing](https://drive.google.com/file/d/13y17OwwNBlHdhB7hguSmOBdxn0Uk4hsI/view?usp=sharing) Two other working documents hold portions of the HED-3G specification that are under development and will not be finalized for Release 1: -> HED-3G Working Document on Spatial Annotation +> HED-3G Working Document on Spatial Annotation > [https://docs.google.com/document/d/1jpSASpWQwOKtan15iQeiYHVewvEeefcBUn1xipNH5-8/view?usp=sharing](https://docs.google.com/document/d/1jpSASpWQwOKtan15iQeiYHVewvEeefcBUn1xipNH5-8/view?usp=sharing) -> HED-3G Working Document on Task Annotation +> HED-3G Working Document on Task Annotation > [https://docs.google.com/document/d/1eGRI_gkYutmwmAl524ezwkX7VwikrLTQa9t8PocQMlU/view?usp=sharing](https://docs.google.com/document/d/1eGRI_gkYutmwmAl524ezwkX7VwikrLTQa9t8PocQMlU/view?usp=sharing)