diff --git a/.nojekyll b/.nojekyll
index 614f645..42712d5 100644
--- a/.nojekyll
+++ b/.nojekyll
@@ -1 +1 @@
-228577b6
\ No newline at end of file
+0f081322
\ No newline at end of file
diff --git a/develop/04c_preprocessing_nf3120.html b/develop/04c_preprocessing_nf3120.html
index 01ed8fe..1f60357 100644
--- a/develop/04c_preprocessing_nf3120.html
+++ b/develop/04c_preprocessing_nf3120.html
@@ -382,23 +382,23 @@ <h2 class="anchored" data-anchor-id="understanding-the-pipeline-options">Underst
 <p>The <code>--input</code> parameter points to the <code>samplesheet.csv</code> file that contains all the info regarding our samples. The file looks like this:</p>
 <div class="cell">
 <div class="cell-output-display">
-<div id="duwmezlxtp" style="padding-left:0px;padding-right:0px;padding-top:10px;padding-bottom:10px;overflow-x:auto;overflow-y:auto;width:auto;height:auto;">
-<style>#duwmezlxtp table {
+<div id="zcivuuidqq" style="padding-left:0px;padding-right:0px;padding-top:10px;padding-bottom:10px;overflow-x:auto;overflow-y:auto;width:auto;height:auto;">
+<style>#zcivuuidqq table {
   font-family: system-ui, 'Segoe UI', Roboto, Helvetica, Arial, sans-serif, 'Apple Color Emoji', 'Segoe UI Emoji', 'Segoe UI Symbol', 'Noto Color Emoji';
   -webkit-font-smoothing: antialiased;
   -moz-osx-font-smoothing: grayscale;
 }
 
-#duwmezlxtp thead, #duwmezlxtp tbody, #duwmezlxtp tfoot, #duwmezlxtp tr, #duwmezlxtp td, #duwmezlxtp th {
+#zcivuuidqq thead, #zcivuuidqq tbody, #zcivuuidqq tfoot, #zcivuuidqq tr, #zcivuuidqq td, #zcivuuidqq th {
   border-style: none;
 }
 
-#duwmezlxtp p {
+#zcivuuidqq p {
   margin: 0;
   padding: 0;
 }
 
-#duwmezlxtp .gt_table {
+#zcivuuidqq .gt_table {
   display: table;
   border-collapse: collapse;
   line-height: normal;
@@ -424,12 +424,12 @@ <h2 class="anchored" data-anchor-id="understanding-the-pipeline-options">Underst
   border-left-color: #D3D3D3;
 }
 
-#duwmezlxtp .gt_caption {
+#zcivuuidqq .gt_caption {
   padding-top: 4px;
   padding-bottom: 4px;
 }
 
-#duwmezlxtp .gt_title {
+#zcivuuidqq .gt_title {
   color: #333333;
   font-size: 125%;
   font-weight: initial;
@@ -441,7 +441,7 @@ <h2 class="anchored" data-anchor-id="understanding-the-pipeline-options">Underst
   border-bottom-width: 0;
 }
 
-#duwmezlxtp .gt_subtitle {
+#zcivuuidqq .gt_subtitle {
   color: #333333;
   font-size: 85%;
   font-weight: initial;
@@ -453,7 +453,7 @@ <h2 class="anchored" data-anchor-id="understanding-the-pipeline-options">Underst
   border-top-width: 0;
 }
 
-#duwmezlxtp .gt_heading {
+#zcivuuidqq .gt_heading {
   background-color: #FFFFFF;
   text-align: center;
   border-bottom-color: #FFFFFF;
@@ -465,13 +465,13 @@ <h2 class="anchored" data-anchor-id="understanding-the-pipeline-options">Underst
   border-right-color: #D3D3D3;
 }
 
-#duwmezlxtp .gt_bottom_border {
+#zcivuuidqq .gt_bottom_border {
   border-bottom-style: solid;
   border-bottom-width: 2px;
   border-bottom-color: #D3D3D3;
 }
 
-#duwmezlxtp .gt_col_headings {
+#zcivuuidqq .gt_col_headings {
   border-top-style: solid;
   border-top-width: 2px;
   border-top-color: #D3D3D3;
@@ -486,7 +486,7 @@ <h2 class="anchored" data-anchor-id="understanding-the-pipeline-options">Underst
   border-right-color: #D3D3D3;
 }
 
-#duwmezlxtp .gt_col_heading {
+#zcivuuidqq .gt_col_heading {
   color: #333333;
   background-color: #FFFFFF;
   font-size: 100%;
@@ -506,7 +506,7 @@ <h2 class="anchored" data-anchor-id="understanding-the-pipeline-options">Underst
   overflow-x: hidden;
 }
 
-#duwmezlxtp .gt_column_spanner_outer {
+#zcivuuidqq .gt_column_spanner_outer {
   color: #333333;
   background-color: #FFFFFF;
   font-size: 100%;
@@ -518,15 +518,15 @@ <h2 class="anchored" data-anchor-id="understanding-the-pipeline-options">Underst
   padding-right: 4px;
 }
 
-#duwmezlxtp .gt_column_spanner_outer:first-child {
+#zcivuuidqq .gt_column_spanner_outer:first-child {
   padding-left: 0;
 }
 
-#duwmezlxtp .gt_column_spanner_outer:last-child {
+#zcivuuidqq .gt_column_spanner_outer:last-child {
   padding-right: 0;
 }
 
-#duwmezlxtp .gt_column_spanner {
+#zcivuuidqq .gt_column_spanner {
   border-bottom-style: solid;
   border-bottom-width: 2px;
   border-bottom-color: #D3D3D3;
@@ -538,11 +538,11 @@ <h2 class="anchored" data-anchor-id="understanding-the-pipeline-options">Underst
   width: 100%;
 }
 
-#duwmezlxtp .gt_spanner_row {
+#zcivuuidqq .gt_spanner_row {
   border-bottom-style: hidden;
 }
 
-#duwmezlxtp .gt_group_heading {
+#zcivuuidqq .gt_group_heading {
   padding-top: 8px;
   padding-bottom: 8px;
   padding-left: 5px;
@@ -568,7 +568,7 @@ <h2 class="anchored" data-anchor-id="understanding-the-pipeline-options">Underst
   text-align: left;
 }
 
-#duwmezlxtp .gt_empty_group_heading {
+#zcivuuidqq .gt_empty_group_heading {
   padding: 0.5px;
   color: #333333;
   background-color: #FFFFFF;
@@ -583,15 +583,15 @@ <h2 class="anchored" data-anchor-id="understanding-the-pipeline-options">Underst
   vertical-align: middle;
 }
 
-#duwmezlxtp .gt_from_md > :first-child {
+#zcivuuidqq .gt_from_md > :first-child {
   margin-top: 0;
 }
 
-#duwmezlxtp .gt_from_md > :last-child {
+#zcivuuidqq .gt_from_md > :last-child {
   margin-bottom: 0;
 }
 
-#duwmezlxtp .gt_row {
+#zcivuuidqq .gt_row {
   padding-top: 8px;
   padding-bottom: 8px;
   padding-left: 5px;
@@ -610,7 +610,7 @@ <h2 class="anchored" data-anchor-id="understanding-the-pipeline-options">Underst
   overflow-x: hidden;
 }
 
-#duwmezlxtp .gt_stub {
+#zcivuuidqq .gt_stub {
   color: #333333;
   background-color: #FFFFFF;
   font-size: 100%;
@@ -623,7 +623,7 @@ <h2 class="anchored" data-anchor-id="understanding-the-pipeline-options">Underst
   padding-right: 5px;
 }
 
-#duwmezlxtp .gt_stub_row_group {
+#zcivuuidqq .gt_stub_row_group {
   color: #333333;
   background-color: #FFFFFF;
   font-size: 100%;
@@ -637,15 +637,15 @@ <h2 class="anchored" data-anchor-id="understanding-the-pipeline-options">Underst
   vertical-align: top;
 }
 
-#duwmezlxtp .gt_row_group_first td {
+#zcivuuidqq .gt_row_group_first td {
   border-top-width: 2px;
 }
 
-#duwmezlxtp .gt_row_group_first th {
+#zcivuuidqq .gt_row_group_first th {
   border-top-width: 2px;
 }
 
-#duwmezlxtp .gt_summary_row {
+#zcivuuidqq .gt_summary_row {
   color: #333333;
   background-color: #FFFFFF;
   text-transform: inherit;
@@ -655,16 +655,16 @@ <h2 class="anchored" data-anchor-id="understanding-the-pipeline-options">Underst
   padding-right: 5px;
 }
 
-#duwmezlxtp .gt_first_summary_row {
+#zcivuuidqq .gt_first_summary_row {
   border-top-style: solid;
   border-top-color: #D3D3D3;
 }
 
-#duwmezlxtp .gt_first_summary_row.thick {
+#zcivuuidqq .gt_first_summary_row.thick {
   border-top-width: 2px;
 }
 
-#duwmezlxtp .gt_last_summary_row {
+#zcivuuidqq .gt_last_summary_row {
   padding-top: 8px;
   padding-bottom: 8px;
   padding-left: 5px;
@@ -674,7 +674,7 @@ <h2 class="anchored" data-anchor-id="understanding-the-pipeline-options">Underst
   border-bottom-color: #D3D3D3;
 }
 
-#duwmezlxtp .gt_grand_summary_row {
+#zcivuuidqq .gt_grand_summary_row {
   color: #333333;
   background-color: #FFFFFF;
   text-transform: inherit;
@@ -684,7 +684,7 @@ <h2 class="anchored" data-anchor-id="understanding-the-pipeline-options">Underst
   padding-right: 5px;
 }
 
-#duwmezlxtp .gt_first_grand_summary_row {
+#zcivuuidqq .gt_first_grand_summary_row {
   padding-top: 8px;
   padding-bottom: 8px;
   padding-left: 5px;
@@ -694,7 +694,7 @@ <h2 class="anchored" data-anchor-id="understanding-the-pipeline-options">Underst
   border-top-color: #D3D3D3;
 }
 
-#duwmezlxtp .gt_last_grand_summary_row_top {
+#zcivuuidqq .gt_last_grand_summary_row_top {
   padding-top: 8px;
   padding-bottom: 8px;
   padding-left: 5px;
@@ -704,11 +704,11 @@ <h2 class="anchored" data-anchor-id="understanding-the-pipeline-options">Underst
   border-bottom-color: #D3D3D3;
 }
 
-#duwmezlxtp .gt_striped {
+#zcivuuidqq .gt_striped {
   background-color: rgba(128, 128, 128, 0.05);
 }
 
-#duwmezlxtp .gt_table_body {
+#zcivuuidqq .gt_table_body {
   border-top-style: solid;
   border-top-width: 2px;
   border-top-color: #D3D3D3;
@@ -717,7 +717,7 @@ <h2 class="anchored" data-anchor-id="understanding-the-pipeline-options">Underst
   border-bottom-color: #D3D3D3;
 }
 
-#duwmezlxtp .gt_footnotes {
+#zcivuuidqq .gt_footnotes {
   color: #333333;
   background-color: #FFFFFF;
   border-bottom-style: none;
@@ -731,7 +731,7 @@ <h2 class="anchored" data-anchor-id="understanding-the-pipeline-options">Underst
   border-right-color: #D3D3D3;
 }
 
-#duwmezlxtp .gt_footnote {
+#zcivuuidqq .gt_footnote {
   margin: 0px;
   font-size: 90%;
   padding-top: 4px;
@@ -740,7 +740,7 @@ <h2 class="anchored" data-anchor-id="understanding-the-pipeline-options">Underst
   padding-right: 5px;
 }
 
-#duwmezlxtp .gt_sourcenotes {
+#zcivuuidqq .gt_sourcenotes {
   color: #333333;
   background-color: #FFFFFF;
   border-bottom-style: none;
@@ -754,7 +754,7 @@ <h2 class="anchored" data-anchor-id="understanding-the-pipeline-options">Underst
   border-right-color: #D3D3D3;
 }
 
-#duwmezlxtp .gt_sourcenote {
+#zcivuuidqq .gt_sourcenote {
   font-size: 90%;
   padding-top: 4px;
   padding-bottom: 4px;
@@ -762,63 +762,63 @@ <h2 class="anchored" data-anchor-id="understanding-the-pipeline-options">Underst
   padding-right: 5px;
 }
 
-#duwmezlxtp .gt_left {
+#zcivuuidqq .gt_left {
   text-align: left;
 }
 
-#duwmezlxtp .gt_center {
+#zcivuuidqq .gt_center {
   text-align: center;
 }
 
-#duwmezlxtp .gt_right {
+#zcivuuidqq .gt_right {
   text-align: right;
   font-variant-numeric: tabular-nums;
 }
 
-#duwmezlxtp .gt_font_normal {
+#zcivuuidqq .gt_font_normal {
   font-weight: normal;
 }
 
-#duwmezlxtp .gt_font_bold {
+#zcivuuidqq .gt_font_bold {
   font-weight: bold;
 }
 
-#duwmezlxtp .gt_font_italic {
+#zcivuuidqq .gt_font_italic {
   font-style: italic;
 }
 
-#duwmezlxtp .gt_super {
+#zcivuuidqq .gt_super {
   font-size: 65%;
 }
 
-#duwmezlxtp .gt_footnote_marks {
+#zcivuuidqq .gt_footnote_marks {
   font-size: 75%;
   vertical-align: 0.4em;
   position: initial;
 }
 
-#duwmezlxtp .gt_asterisk {
+#zcivuuidqq .gt_asterisk {
   font-size: 100%;
   vertical-align: 0;
 }
 
-#duwmezlxtp .gt_indent_1 {
+#zcivuuidqq .gt_indent_1 {
   text-indent: 5px;
 }
 
-#duwmezlxtp .gt_indent_2 {
+#zcivuuidqq .gt_indent_2 {
   text-indent: 10px;
 }
 
-#duwmezlxtp .gt_indent_3 {
+#zcivuuidqq .gt_indent_3 {
   text-indent: 15px;
 }
 
-#duwmezlxtp .gt_indent_4 {
+#zcivuuidqq .gt_indent_4 {
   text-indent: 20px;
 }
 
-#duwmezlxtp .gt_indent_5 {
+#zcivuuidqq .gt_indent_5 {
   text-indent: 25px;
 }
 </style>
@@ -1550,7 +1550,7 @@ <h3 class="anchored" data-anchor-id="downstream-analysis-using-your-results">Dow
   </div>
 </nav>
 </div> <!-- /content -->
-<script>var lightboxQuarto = GLightbox({"selector":".lightbox","closeEffect":"zoom","descPosition":"bottom","openEffect":"zoom","loop":false});
+<script>var lightboxQuarto = GLightbox({"descPosition":"bottom","closeEffect":"zoom","openEffect":"zoom","selector":".lightbox","loop":false});
 (function() {
   let previousOnload = window.onload;
   window.onload = () => {
diff --git a/develop/04c_preprocessing_nf3170.html b/develop/04c_preprocessing_nf3170.html
index 2c5a999..ca9fb72 100644
--- a/develop/04c_preprocessing_nf3170.html
+++ b/develop/04c_preprocessing_nf3170.html
@@ -1211,7 +1211,7 @@ <h2 class="anchored" data-anchor-id="downstream-analysis-using-your-results">Dow
   </div>
 </nav>
 </div> <!-- /content -->
-<script>var lightboxQuarto = GLightbox({"loop":false,"selector":".lightbox","descPosition":"bottom","openEffect":"zoom","closeEffect":"zoom"});
+<script>var lightboxQuarto = GLightbox({"closeEffect":"zoom","descPosition":"bottom","openEffect":"zoom","loop":false,"selector":".lightbox"});
 (function() {
   let previousOnload = window.onload;
   window.onload = () => {
diff --git a/develop/05a_data_analysis_setup.html b/develop/05a_data_analysis_setup.html
index 6df4690..7335abb 100644
--- a/develop/05a_data_analysis_setup.html
+++ b/develop/05a_data_analysis_setup.html
@@ -1011,7 +1011,7 @@ <h3 class="anchored" data-anchor-id="reusing-old-job-parameters">Reusing old job
   </div>
 </nav>
 </div> <!-- /content -->
-<script>var lightboxQuarto = GLightbox({"descPosition":"bottom","selector":".lightbox","loop":false,"closeEffect":"zoom","openEffect":"zoom"});
+<script>var lightboxQuarto = GLightbox({"selector":".lightbox","closeEffect":"zoom","openEffect":"zoom","loop":false,"descPosition":"bottom"});
 (function() {
   let previousOnload = window.onload;
   window.onload = () => {
diff --git a/develop/05b_count_matrix.html b/develop/05b_count_matrix.html
index a7c5597..3b9059f 100644
--- a/develop/05b_count_matrix.html
+++ b/develop/05b_count_matrix.html
@@ -1187,7 +1187,7 @@ <h2 class="anchored" data-anchor-id="differential-expression-analysis-workflow">
   </div>
 </nav>
 </div> <!-- /content -->
-<script>var lightboxQuarto = GLightbox({"loop":false,"selector":".lightbox","descPosition":"bottom","openEffect":"zoom","closeEffect":"zoom"});
+<script>var lightboxQuarto = GLightbox({"openEffect":"zoom","closeEffect":"zoom","loop":false,"selector":".lightbox","descPosition":"bottom"});
 (function() {
   let previousOnload = window.onload;
   window.onload = () => {
diff --git a/develop/08b_FA_overrepresentation.html b/develop/08b_FA_overrepresentation.html
index dfcb2aa..2171701 100644
--- a/develop/08b_FA_overrepresentation.html
+++ b/develop/08b_FA_overrepresentation.html
@@ -556,23 +556,23 @@ <h3 class="anchored" data-anchor-id="running-clusterprofiler">Running clusterPro
 <span id="cb4-5"><a href="#cb4-5" aria-hidden="true" tabindex="-1"></a><span class="fu">write.csv</span>(cluster_summary, <span class="st">"../Results/clusterProfiler_Cont-Vamp.csv"</span>)</span></code><button title="Copy to Clipboard" class="code-copy-button"><i class="bi"></i></button></pre></div>
 <div class="cell">
 <div class="cell-output-display">
-<div id="awzjbsigfk" style="padding-left:0px;padding-right:0px;padding-top:10px;padding-bottom:10px;overflow-x:auto;overflow-y:auto;width:auto;height:auto;">
-<style>#awzjbsigfk table {
+<div id="jkwvikpiro" style="padding-left:0px;padding-right:0px;padding-top:10px;padding-bottom:10px;overflow-x:auto;overflow-y:auto;width:auto;height:auto;">
+<style>#jkwvikpiro table {
   font-family: system-ui, 'Segoe UI', Roboto, Helvetica, Arial, sans-serif, 'Apple Color Emoji', 'Segoe UI Emoji', 'Segoe UI Symbol', 'Noto Color Emoji';
   -webkit-font-smoothing: antialiased;
   -moz-osx-font-smoothing: grayscale;
 }
 
-#awzjbsigfk thead, #awzjbsigfk tbody, #awzjbsigfk tfoot, #awzjbsigfk tr, #awzjbsigfk td, #awzjbsigfk th {
+#jkwvikpiro thead, #jkwvikpiro tbody, #jkwvikpiro tfoot, #jkwvikpiro tr, #jkwvikpiro td, #jkwvikpiro th {
   border-style: none;
 }
 
-#awzjbsigfk p {
+#jkwvikpiro p {
   margin: 0;
   padding: 0;
 }
 
-#awzjbsigfk .gt_table {
+#jkwvikpiro .gt_table {
   display: table;
   border-collapse: collapse;
   line-height: normal;
@@ -598,12 +598,12 @@ <h3 class="anchored" data-anchor-id="running-clusterprofiler">Running clusterPro
   border-left-color: #D3D3D3;
 }
 
-#awzjbsigfk .gt_caption {
+#jkwvikpiro .gt_caption {
   padding-top: 4px;
   padding-bottom: 4px;
 }
 
-#awzjbsigfk .gt_title {
+#jkwvikpiro .gt_title {
   color: #333333;
   font-size: 125%;
   font-weight: initial;
@@ -615,7 +615,7 @@ <h3 class="anchored" data-anchor-id="running-clusterprofiler">Running clusterPro
   border-bottom-width: 0;
 }
 
-#awzjbsigfk .gt_subtitle {
+#jkwvikpiro .gt_subtitle {
   color: #333333;
   font-size: 85%;
   font-weight: initial;
@@ -627,7 +627,7 @@ <h3 class="anchored" data-anchor-id="running-clusterprofiler">Running clusterPro
   border-top-width: 0;
 }
 
-#awzjbsigfk .gt_heading {
+#jkwvikpiro .gt_heading {
   background-color: #FFFFFF;
   text-align: center;
   border-bottom-color: #FFFFFF;
@@ -639,13 +639,13 @@ <h3 class="anchored" data-anchor-id="running-clusterprofiler">Running clusterPro
   border-right-color: #D3D3D3;
 }
 
-#awzjbsigfk .gt_bottom_border {
+#jkwvikpiro .gt_bottom_border {
   border-bottom-style: solid;
   border-bottom-width: 2px;
   border-bottom-color: #D3D3D3;
 }
 
-#awzjbsigfk .gt_col_headings {
+#jkwvikpiro .gt_col_headings {
   border-top-style: solid;
   border-top-width: 2px;
   border-top-color: #D3D3D3;
@@ -660,7 +660,7 @@ <h3 class="anchored" data-anchor-id="running-clusterprofiler">Running clusterPro
   border-right-color: #D3D3D3;
 }
 
-#awzjbsigfk .gt_col_heading {
+#jkwvikpiro .gt_col_heading {
   color: #333333;
   background-color: #FFFFFF;
   font-size: 100%;
@@ -680,7 +680,7 @@ <h3 class="anchored" data-anchor-id="running-clusterprofiler">Running clusterPro
   overflow-x: hidden;
 }
 
-#awzjbsigfk .gt_column_spanner_outer {
+#jkwvikpiro .gt_column_spanner_outer {
   color: #333333;
   background-color: #FFFFFF;
   font-size: 100%;
@@ -692,15 +692,15 @@ <h3 class="anchored" data-anchor-id="running-clusterprofiler">Running clusterPro
   padding-right: 4px;
 }
 
-#awzjbsigfk .gt_column_spanner_outer:first-child {
+#jkwvikpiro .gt_column_spanner_outer:first-child {
   padding-left: 0;
 }
 
-#awzjbsigfk .gt_column_spanner_outer:last-child {
+#jkwvikpiro .gt_column_spanner_outer:last-child {
   padding-right: 0;
 }
 
-#awzjbsigfk .gt_column_spanner {
+#jkwvikpiro .gt_column_spanner {
   border-bottom-style: solid;
   border-bottom-width: 2px;
   border-bottom-color: #D3D3D3;
@@ -712,11 +712,11 @@ <h3 class="anchored" data-anchor-id="running-clusterprofiler">Running clusterPro
   width: 100%;
 }
 
-#awzjbsigfk .gt_spanner_row {
+#jkwvikpiro .gt_spanner_row {
   border-bottom-style: hidden;
 }
 
-#awzjbsigfk .gt_group_heading {
+#jkwvikpiro .gt_group_heading {
   padding-top: 8px;
   padding-bottom: 8px;
   padding-left: 5px;
@@ -742,7 +742,7 @@ <h3 class="anchored" data-anchor-id="running-clusterprofiler">Running clusterPro
   text-align: left;
 }
 
-#awzjbsigfk .gt_empty_group_heading {
+#jkwvikpiro .gt_empty_group_heading {
   padding: 0.5px;
   color: #333333;
   background-color: #FFFFFF;
@@ -757,15 +757,15 @@ <h3 class="anchored" data-anchor-id="running-clusterprofiler">Running clusterPro
   vertical-align: middle;
 }
 
-#awzjbsigfk .gt_from_md > :first-child {
+#jkwvikpiro .gt_from_md > :first-child {
   margin-top: 0;
 }
 
-#awzjbsigfk .gt_from_md > :last-child {
+#jkwvikpiro .gt_from_md > :last-child {
   margin-bottom: 0;
 }
 
-#awzjbsigfk .gt_row {
+#jkwvikpiro .gt_row {
   padding-top: 8px;
   padding-bottom: 8px;
   padding-left: 5px;
@@ -784,7 +784,7 @@ <h3 class="anchored" data-anchor-id="running-clusterprofiler">Running clusterPro
   overflow-x: hidden;
 }
 
-#awzjbsigfk .gt_stub {
+#jkwvikpiro .gt_stub {
   color: #333333;
   background-color: #FFFFFF;
   font-size: 100%;
@@ -797,7 +797,7 @@ <h3 class="anchored" data-anchor-id="running-clusterprofiler">Running clusterPro
   padding-right: 5px;
 }
 
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index 758cc59..f71f044 100644
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