diff --git a/Notebooks/05b_count_matrix.Rmd b/Notebooks/05b_count_matrix.Rmd index 73d044d..25c64f5 100644 --- a/Notebooks/05b_count_matrix.Rmd +++ b/Notebooks/05b_count_matrix.Rmd @@ -12,7 +12,7 @@ output: theme: yeti # nice theme for the webpage toc: true # table of contents toc_float: true # table of contents "floats" in the document - code_folding: show + code_folding: none df_print: paged # data frames are interactive dev: png # what format do you want for the figures? --- @@ -42,7 +42,7 @@ Approximate time: 20 minutes For this analysis we will be using several R packages, some which have been installed from CRAN and others from Bioconductor. To use these packages (and the functions contained within them), we need to **load the libraries.** -```{r} +```{r, echo=TRUE} library(tidyverse) library(DESeq2) library(tximport)