diff --git a/SortedQueryTest.h5 b/SortedQueryTest.h5 new file mode 100644 index 000000000..67f3d7d6c Binary files /dev/null and b/SortedQueryTest.h5 differ diff --git a/tests/unit/test_query.py b/tests/unit/test_query.py deleted file mode 100644 index 0646825d6..000000000 --- a/tests/unit/test_query.py +++ /dev/null @@ -1,161 +0,0 @@ -# import os -# from abc import ABCMeta, abstractmethod -# -# import numpy as np -# from h5py import File -# from hdmf.array import SortedArray, LinSpace -# from hdmf.query import HDMFDataset, Query -# from hdmf.testing import TestCase -# -# -# class AbstractQueryMixin(metaclass=ABCMeta): -# -# @abstractmethod -# def getDataset(self): -# raise NotImplementedError('Cannot run test unless getDataset is implemented') -# -# def setUp(self): -# self.dset = self.getDataset() -# self.wrapper = HDMFDataset(self.dset) -# -# def test_get_dataset(self): -# array = self.wrapper.dataset -# self.assertIsInstance(array, SortedArray) -# -# def test___gt__(self): -# ''' -# Test wrapper greater than magic method -# ''' -# q = self.wrapper > 5 -# self.assertIsInstance(q, Query) -# result = q.evaluate() -# expected = [False, False, False, False, False, -# False, True, True, True, True] -# expected = slice(6, 10) -# self.assertEqual(result, expected) -# -# def test___ge__(self): -# ''' -# Test wrapper greater than or equal magic method -# ''' -# q = self.wrapper >= 5 -# self.assertIsInstance(q, Query) -# result = q.evaluate() -# expected = [False, False, False, False, False, -# True, True, True, True, True] -# expected = slice(5, 10) -# self.assertEqual(result, expected) -# -# def test___lt__(self): -# ''' -# Test wrapper less than magic method -# ''' -# q = self.wrapper < 5 -# self.assertIsInstance(q, Query) -# result = q.evaluate() -# expected = [True, True, True, True, True, -# False, False, False, False, False] -# expected = slice(0, 5) -# self.assertEqual(result, expected) -# -# def test___le__(self): -# ''' -# Test wrapper less than or equal magic method -# ''' -# q = self.wrapper <= 5 -# self.assertIsInstance(q, Query) -# result = q.evaluate() -# expected = [True, True, True, True, True, -# True, False, False, False, False] -# expected = slice(0, 6) -# self.assertEqual(result, expected) -# -# def test___eq__(self): -# ''' -# Test wrapper equals magic method -# ''' -# q = self.wrapper == 5 -# self.assertIsInstance(q, Query) -# result = q.evaluate() -# expected = [False, False, False, False, False, -# True, False, False, False, False] -# expected = 5 -# self.assertTrue(np.array_equal(result, expected)) -# -# def test___ne__(self): -# ''' -# Test wrapper not equal magic method -# ''' -# q = self.wrapper != 5 -# self.assertIsInstance(q, Query) -# result = q.evaluate() -# expected = [True, True, True, True, True, -# False, True, True, True, True] -# expected = [slice(0, 5), slice(6, 10)] -# self.assertTrue(np.array_equal(result, expected)) -# -# def test___getitem__(self): -# ''' -# Test wrapper getitem using slice -# ''' -# result = self.wrapper[0:5] -# expected = [0, 1, 2, 3, 4] -# self.assertTrue(np.array_equal(result, expected)) -# -# def test___getitem__query(self): -# ''' -# Test wrapper getitem using query -# ''' -# q = self.wrapper < 5 -# result = self.wrapper[q] -# expected = [0, 1, 2, 3, 4] -# self.assertTrue(np.array_equal(result, expected)) -# -# -# class SortedQueryTest(AbstractQueryMixin, TestCase): -# -# path = 'SortedQueryTest.h5' -# -# def getDataset(self): -# self.f = File(self.path, 'w') -# self.input = [0, 1, 2, 3, 4, 5, 6, 7, 8, 9] -# self.d = self.f.create_dataset('dset', data=self.input) -# return SortedArray(self.d) -# -# def tearDown(self): -# self.f.close() -# if os.path.exists(self.path): -# os.remove(self.path) -# -# -# class LinspaceQueryTest(AbstractQueryMixin, TestCase): -# -# path = 'LinspaceQueryTest.h5' -# -# def getDataset(self): -# return LinSpace(0, 10, 1) -# -# -# class CompoundQueryTest(TestCase): -# -# def getM(self): -# return SortedArray(np.arange(10, 20, 1)) -# -# def getN(self): -# return SortedArray(np.arange(10.0, 20.0, 0.5)) -# -# def setUp(self): -# self.m = HDMFDataset(self.getM()) -# self.n = HDMFDataset(self.getN()) -# -# # TODO: test not completed -# # def test_map(self): -# # q = self.m == (12, 16) # IN operation -# # q.evaluate() # [2,3,4,5] -# # q.evaluate(False) # RangeResult(2,6) -# # r = self.m[q] # noqa: F841 -# # r = self.m[q.evaluate()] # noqa: F841 -# # r = self.m[q.evaluate(False)] # noqa: F841 -# -# def tearDown(self): -# pass