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What is the "allele average" in PrediXcan dosage format file? #190

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ZhijieHanbioinfor opened this issue Jan 29, 2024 · 0 comments
Open

What is the "allele average" in PrediXcan dosage format file? #190

ZhijieHanbioinfor opened this issue Jan 29, 2024 · 0 comments

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@ZhijieHanbioinfor
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Hi,

I would like use the M01_covariances_correlations.py to build my own SNP covariance files. The inputs include a PrediXcan dosage format file. What is the "allele average" in PrediXcan dosage format file? Is it the Minor Allele Frequency MAF? Thank you for your help.
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