RNAseq fusion visulization with chimeraviz has problem

[wyy123-github]

hello, when i use the R package "chimeraviz" for RNAseq fusion visualization, the created list "fusions"
by import_Pizzly.R have peoblem, the "chromosome" object is not correct, so the pdf created get no fusion information, can you help to check the script import_Pizzly.R provided in pmbio is right. thanks!

[zlskidmore]

@wyy123-github are you using the same version of pizzly as in the workshop? v0.37.3

[wyy123-github]

hello, thanks for your reply. the pizzly version i used is 0.37.3. the appendix is the input fusion file created by pizzly:djg_fusions_filt_sorted.txt, and the script import_Pizzly.R which downloaded from the websit, can you help to have a look?

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------------------------------------------------------------------ 发件人：Zachary Skidmore <[email protected]> 发送时间：2019年10月29日(星期二) 00:45 收件人：griffithlab/pmbio.org <[email protected]> 抄　送：王燕燕 <[email protected]>; Mention <[email protected]> 主　题：Re: [griffithlab/pmbio.org] RNAseq fusion visulization with chimeraviz has problem (#16) @wyy123-github are you using the same version of pizzly as in the workshop? v0.37.3 — You are receiving this because you were mentioned. Reply to this email directly, view it on GitHub, or unsubscribe.