diff --git a/docs/pvacbind/output_files.rst b/docs/pvacbind/output_files.rst index b132d5ec..52e2674f 100644 --- a/docs/pvacbind/output_files.rst +++ b/docs/pvacbind/output_files.rst @@ -258,19 +258,9 @@ option is chosen. * - Column Name - Description (BLAST) - Description (reference fasta) - * - ``Chromosome`` - - :cspan:`2` The chromosome of this variant - * - ``Start`` - - :cspan:`2` The start position of this variant in the zero-based, half-open coordinate system - * - ``Stop`` - - :cspan:`2` The stop position of this variant in the zero-based, half-open coordinate system - * - ``Reference`` - - :cspan:`2` The reference allele - * - ``Variant`` - - :cspan:`2` The alt allele - * - ``Transcript`` - - :cspan:`2` The Ensembl ID of the affected transcript - * - ``MT Epitope Seq`` + * - ``ID`` + - :cspan:`2` A unique identifier for the variant + * - ``Epitope Seq`` - :cspan:`2` The mutant peptide sequence for the epitope candidate * - ``Peptide`` - The peptide sequence submitted to BLAST diff --git a/docs/pvacfuse/output_files.rst b/docs/pvacfuse/output_files.rst index aebcc449..fe7c4049 100644 --- a/docs/pvacfuse/output_files.rst +++ b/docs/pvacfuse/output_files.rst @@ -326,19 +326,9 @@ option is chosen. * - Column Name - Description (BLAST) - Description (reference fasta) - * - ``Chromosome`` - - :cspan:`2` The chromosome of this variant - * - ``Start`` - - :cspan:`2` The start position of this variant in the zero-based, half-open coordinate system - * - ``Stop`` - - :cspan:`2` The stop position of this variant in the zero-based, half-open coordinate system - * - ``Reference`` - - :cspan:`2` The reference allele - * - ``Variant`` - - :cspan:`2` The alt allele - * - ``Transcript`` - - :cspan:`2` The Ensembl ID of the affected transcript - * - ``MT Epitope Seq`` + * - ``ID`` + - :cspan:`2` A unique identifier for the fusion + * - ``Epitope Seq`` - :cspan:`2` The mutant peptide sequence for the epitope candidate * - ``Peptide`` - The peptide sequence submitted to BLAST