From 268adac32b9cf5528111b22884813a03892c34e1 Mon Sep 17 00:00:00 2001
From: Casey Greene <cgreene@users.noreply.github.com>
Date: Thu, 12 Oct 2023 09:22:52 -0400
Subject: [PATCH] add images + manuscript (#112)

* add images + manuscript

* Update citations
---
 _cite/.cache/cache.db | Bin 315392 -> 315392 bytes
 _data/citations.yaml  |  36 ++++++++++++++++++++++++++++++++++++
 _data/sources.yaml    |   4 ++++
 3 files changed, 40 insertions(+)

diff --git a/_cite/.cache/cache.db b/_cite/.cache/cache.db
index 5bc054c7be94e6a31fe7f50f08baaac3f3ec57bf..2687789d022abb96f61c5d2c2bb80f902f559042 100644
GIT binary patch
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diff --git a/_data/citations.yaml b/_data/citations.yaml
index 55c6f4b0..adab7b61 100644
--- a/_data/citations.yaml
+++ b/_data/citations.yaml
@@ -1,5 +1,40 @@
 # DO NOT EDIT, GENERATED AUTOMATICALLY
 
+- id: doi:10.5281/zenodo.8186993
+  title: Human Microbiome Compendium dataset
+  authors:
+  - Richard J. Abdill
+  - Samantha P. Graham
+  - Vincent Rubinetti
+  - Frank W. Albert
+  - Casey S. Greene
+  - Sean Davis
+  - Ran Blekhman
+  publisher: Zenodo
+  date: '2023-10-11'
+  link: https://doi.org/gsvhxn
+  orcid: 0000-0001-8713-9213
+  member: casey-greene
+  plugin: orcid.py
+  file: orcid.yaml
+- id: doi:10.1101/2023.10.11.560955
+  title: Integration of 168,000 samples reveals global patterns of the human gut microbiome
+  authors:
+  - Richard J. Abdill
+  - Samantha P. Graham
+  - Vincent Rubinetti
+  - Frank W. Albert
+  - Casey S. Greene
+  - Sean Davis
+  - Ran Blekhman
+  publisher: Cold Spring Harbor Laboratory
+  date: '2023-10-11'
+  link: https://doi.org/gsvf5z
+  orcid: 0000-0001-8713-9213
+  member: casey-greene
+  plugin: sources.py
+  file: sources.yaml
+  image: https://user-images.githubusercontent.com/542643/274611735-0b4d7372-d935-4a0d-b3a3-909012346b35.png
 - id: doi:10.1101/2023.08.21.554169
   title: Analysis of<i>Pseudomonas aeruginosa</i>transcription in an<i>ex vivo</i>cystic
     fibrosis sputum model identifies metal restriction as a gene expression stimulus
@@ -17,6 +52,7 @@
   member: casey-greene
   plugin: sources.py
   file: sources.yaml
+  image: https://user-images.githubusercontent.com/542643/274611350-b55a8531-8fee-4125-8054-4db365ab8009.png
 - id: doi:10.1101/2023.07.31.551386
   title: 'MousiPLIER: A Mouse Pathway-Level Information Extractor Model'
   authors:
diff --git a/_data/sources.yaml b/_data/sources.yaml
index 12027a66..3f7e5e83 100644
--- a/_data/sources.yaml
+++ b/_data/sources.yaml
@@ -1,4 +1,8 @@
+- id: doi:10.1101/2023.10.11.560955
+  image: https://user-images.githubusercontent.com/542643/274611735-0b4d7372-d935-4a0d-b3a3-909012346b35.png
+
 - id: doi:10.1101/2023.08.21.554169
+  image: https://user-images.githubusercontent.com/542643/274611350-b55a8531-8fee-4125-8054-4db365ab8009.png
 
 - id: doi:10.1101/2023.07.31.551386
   image: https://user-images.githubusercontent.com/542643/262141715-23a165d3-0156-4ba0-afc6-0ef260c46d7c.png