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"get_pseudo_sdrf.py" and "gen_spreadsheets.py" #49

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dongbohu opened this issue Apr 28, 2020 · 0 comments
Open

"get_pseudo_sdrf.py" and "gen_spreadsheets.py" #49

dongbohu opened this issue Apr 28, 2020 · 0 comments

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@dongbohu
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The management command adage/analyze/management/commands/import_experiments_samples.py calls the following two modules:

  • get_pseudo_sdrf.py
  • gen_spreadsheets.py

They were originally written in a Python 2 repo: https://bitbucket.org/greenelab/get_pseudomonas/

We need to factor out these two modules so that they are compatible to both Python 2 and Python 3 (and maybe port the whole get_pseudomonas repo to Python 3 too).

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