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[Roadmap] Sequential data format (e.g. FastA) support #102

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gnh1201 opened this issue Jan 22, 2024 · 2 comments
Open

[Roadmap] Sequential data format (e.g. FastA) support #102

gnh1201 opened this issue Jan 22, 2024 · 2 comments
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collaboration This is attached issue to a social collaboration investigating Not clear, but candidated like a bug priority:low Don't worry research Nobody spends money, but it is necessary roadmap A future plan scientific Maybe they are a mad scientists :(

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@gnh1201
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gnh1201 commented Jan 22, 2024 •
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Summary

  1. Around 2013, there were requirements for processing data related to sequential data (e.g., binary data, sequences, etc.). We were investigating data on hepatitis E that was readily available on GitHub.
  2. As mentioned in [Roadmap] A Compact Module for Processing Periodic Functions (e.g., FT, sine functions) #128, before moving on to specialized analytical tools in each field, there was a requirement for a compact module capable of pre-processing.
  3. In the field of biology, the demand for this requirement resurfaced during the COVID-19 pandemic in 2019.
  4. One of the algorithms we have identified and applied so far to meet this requirement is the Normalized Compression Distance (NCD). It uses compression algorithms such as LZMA and DEFLATE.
@gnh1201 gnh1201 added enhancement New feature or request commercial For customers with a willingness to pay labels Jan 22, 2024
@gnh1201 gnh1201 changed the title [lib/nucleotide] FastA format [lib/bioseq] FastA format Jan 22, 2024
@gnh1201 gnh1201 added research Nobody spends money, but it is necessary and removed commercial For customers with a willingness to pay labels Jan 22, 2024
@gnh1201 gnh1201 changed the title [lib/bioseq] FastA format [lib/seqformat] Sequential data format (e.g. FastA) support Jan 22, 2024
@gnh1201 gnh1201 added the wontfix This will not be worked on label Apr 6, 2024
@gnh1201
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gnh1201 commented Apr 6, 2024 •
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This issue will not be addressed here, and it will be transferred to another project suitable for this issue in the future.

@gnh1201 gnh1201 closed this as completed Apr 6, 2024
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gnh1201 commented Jul 10, 2024

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@gnh1201 gnh1201 added scientific Maybe they are a mad scientists :( investigating Not clear, but candidated like a bug and removed wontfix This will not be worked on enhancement New feature or request labels Aug 3, 2024
@gnh1201 gnh1201 changed the title [lib/seqformat] Sequential data format (e.g. FastA) support [Uncategorized] Sequential data format (e.g. FastA) support Aug 24, 2024
@gnh1201 gnh1201 reopened this Aug 24, 2024
@gnh1201 gnh1201 added the roadmap A future plan label Aug 24, 2024
@gnh1201 gnh1201 changed the title [Uncategorized] Sequential data format (e.g. FastA) support [Roadmap] Sequential data format (e.g. FastA) support Aug 24, 2024
@gnh1201 gnh1201 added priority:low Don't worry collaboration This is attached issue to a social collaboration labels Sep 15, 2024
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collaboration This is attached issue to a social collaboration investigating Not clear, but candidated like a bug priority:low Don't worry research Nobody spends money, but it is necessary roadmap A future plan scientific Maybe they are a mad scientists :(
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