diff --git a/binette/cds.py b/binette/cds.py index e60762f..27d2e64 100644 --- a/binette/cds.py +++ b/binette/cds.py @@ -266,10 +266,10 @@ def filter_faa_file( # Log the computed metrics logging.info(f"Processing protein sequences from '{input_faa_file}'.") logging.info( - f"Filtered {input_faa_file} to retain genes from {total_contigs} contigs that are included the input bins." + f"Filtered {input_faa_file} to retain genes from {total_contigs} contigs that are included in the input bins." ) - logging.info( - f"Found {contigs_with_no_genes} contigs ({contigs_with_no_genes / total_contigs:.2%}) with no genes." + logging.debug( + f"Found {contigs_with_no_genes}/{total_contigs} contigs ({contigs_with_no_genes / total_contigs:.2%}) with no genes." ) logging.debug( f"{contigs_not_in_keep_list} contigs from the input FASTA file are not in the keep list."