diff --git a/tools/mmseqs2/mmseqs2_taxonomy_assignment.xml b/tools/mmseqs2/mmseqs2_taxonomy_assignment.xml index ea7bb84cab9..52e189ec3a1 100644 --- a/tools/mmseqs2/mmseqs2_taxonomy_assignment.xml +++ b/tools/mmseqs2/mmseqs2_taxonomy_assignment.xml @@ -17,8 +17,9 @@ mmseqs createdb --shuffle $createdb.shuffle && ls -lah && ls -lah '$createtaxdb.database_type.mmseqs2_db_select.fields.path'* && +ln -s '$createtaxdb.database_type.mmseqs2_db_select.fields.path' taxdb && mmseqs createtaxdb - '$createtaxdb.database_type.mmseqs2_db_select.fields.path' + 'taxdb' 'tmp' #if '$createtaxdb.tax_mapping_file' --tax-mapping-file '$createtaxdb.tax_mapping_file'