diff --git a/planemo/galaxy/config.py b/planemo/galaxy/config.py
index adeb99670..c4b6480b3 100644
--- a/planemo/galaxy/config.py
+++ b/planemo/galaxy/config.py
@@ -205,10 +205,13 @@ def read_log(ctx, log_path, e: threading.Event):
                     log_fh = open(log_path, "a+")
                 log_lines = log_fh.read()
                 if log_lines:
-                    ctx.log(log_lines)
+                    ctx.log(log_lines.rstrip())
             e.wait(1)
     finally:
         if log_fh:
+            log_lines = log_fh.read()
+            if log_lines:
+                ctx.log(log_lines.rstrip())
             log_fh.close()