| No. | Software Package | Download Link |
|---|---|---|
| 1 | miniconda | Download |
| 2 | Fastqc v-0.11.9 | Download |
| 3 | MultiQC V-1.11 | Download |
| 4 | Trim galore v-0.6.6 | Download |
| 5 | kmergenie v-1.7051 | Download |
| 6 | SPAdes v 3.15.5 | Download |
| 7 | velevt v-1.2.10 | Download |
| 8 | RepeatModeler v 2.0.4 | Download |
| 9 | RepeatMasker v-4.1.4 | Download |
| 10 | QUAST v 5.2.0 | Download |
| 11 | BUSCO v-5.4.4 | Download |
| 12 | BRAKER v 3.0.3 | Download |
| 13 | OrthoFinder v2.5.5 | Download |
| 14 | SeqKit v 2.5.1 | Download |
| 15 | Muscle 5.1 | Download |
| 16 | Jalview-Desktop-App | Download |
| 17 | Mega-Desktop App | Download |
| 18 | Trimal v1.4.1 | Download |
| 19 | RAxML-NG V1.2.0 | Download |
| 20 | iTOL 6.8 | Download |