diff --git a/.zenodo.json b/.zenodo.json
index f30a0f78..c3b8143a 100644
--- a/.zenodo.json
+++ b/.zenodo.json
@@ -2,7 +2,7 @@
     "description": "<p>MpGAP is built using Nextflow, a workflow tool to run tasks across multiple compute infrastructures in a very portable manner. It uses Docker/Singularity containers making installation trivial and results highly reproducible. It is an easy to use pipeline that adopts well known software for _de novo_ genome assembly of Illumina, Pacbio and Oxford Nanopore sequencing data through illumina only, long reads only or hybrid modes.</p>",
     "license": "other-open", 
     "title": "fmalmeida/MpGAP: A generic multi-platform genome assembly pipeline", 
-    "version": "v3.2", 
+    "version": "v3.2.1", 
     "upload_type": "software",
     "creators": [
         {
diff --git a/markdown/CHANGELOG.md b/markdown/CHANGELOG.md
index 52d7476f..365051dd 100644
--- a/markdown/CHANGELOG.md
+++ b/markdown/CHANGELOG.md
@@ -2,7 +2,14 @@
 
 The tracking for changes started in v2.
 
-## v3.2 -- [2024-Mar-06]
+## v3.2.1 -- [2024-Jul-24]
+
+* [#77](https://github.com/fmalmeida/MpGAP/issues/77)
+  * Add cleanup to avoid `overwrite existing files` error in BUSCO when resuming a run.
+* [#79](https://github.com/fmalmeida/MpGAP/issues/79)
+  * Add if-else in MultiQC module so that if Quast report has different set of columns.
+
+## v3.2.0 -- [2024-Mar-06]
 
 * Update unicyler to v0.5.0
 * Adjust Pilon polishing module to select how many rounds of polishing to run. Default is 4.
diff --git a/modules/local/QualityAssessment/multiqc.nf b/modules/local/QualityAssessment/multiqc.nf
index 8869b88f..ea957aea 100644
--- a/modules/local/QualityAssessment/multiqc.nf
+++ b/modules/local/QualityAssessment/multiqc.nf
@@ -31,7 +31,8 @@ process multiqc {
   echo \"\" >> ASSEMBLY_SUMMARY.txt
   echo \"## Main QUAST statistics\" >> ASSEMBLY_SUMMARY.txt
   echo \"\" >> ASSEMBLY_SUMMARY.txt
-  csvtk cut -t -f 1,14,15,16,17,18,22,27,28,31 multiqc_data/multiqc_quast.txt | csvtk -t pretty >> ASSEMBLY_SUMMARY.txt
+  csvtk cut -t -f 1,14,15,16,17,18,22,27,28,31 multiqc_data/multiqc_quast.txt | csvtk -t pretty >> ASSEMBLY_SUMMARY.txt || \
+  csvtk cut -t -f "Sample,# contigs,Largest contig,Total length,GC (%),N50,L90,# predicted rRNA genes" multiqc_data/multiqc_quast.txt | csvtk -t pretty >> ASSEMBLY_SUMMARY.txt
   echo \"\" >> ASSEMBLY_SUMMARY.txt
   echo \"## Main BUSCO statistics\" >> ASSEMBLY_SUMMARY.txt
   echo \"\" >> ASSEMBLY_SUMMARY.txt
diff --git a/modules/local/QualityAssessment/quast.nf b/modules/local/QualityAssessment/quast.nf
index 4e920042..c17f581e 100644
--- a/modules/local/QualityAssessment/quast.nf
+++ b/modules/local/QualityAssessment/quast.nf
@@ -54,6 +54,7 @@ process quast {
   // any case
   """
   # run quast
+  rm -rf ${assembler}/
   quast.py \\
       -o ${assembler} \\
       -t $task.cpus \\
@@ -68,6 +69,7 @@ process quast {
   # run busco
   cp -r /opt/busco_db .
   busco \\
+    -f \\
     --tar \\
     --download_path ./ \\
     -i ${contigs} \\
diff --git a/nextflow.config b/nextflow.config
index 9f9c9c89..57ceb2d0 100644
--- a/nextflow.config
+++ b/nextflow.config
@@ -109,5 +109,5 @@ manifest {
   homePage        = "https://github.com/fmalmeida/mpgap"
   mainScript      = "main.nf"
   nextflowVersion = "!>=21.10.3"
-  version         = "3.2"
+  version         = "3.2.1"
 }
\ No newline at end of file