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Getting structural embeddings #30

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moktayoglu opened this issue Dec 9, 2022 · 1 comment
Open

Getting structural embeddings #30

moktayoglu opened this issue Dec 9, 2022 · 1 comment

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@moktayoglu
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Hello,

Is there a way to extract the structural embeddings from the model?
@PawelSzczerbiak
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Hi, could you clarify what do you mean by structural embeddings? As far as I understand, the only structure representation used by DeepFRI is a usual contact map which you can create using preprocessing/PDB2distMap.py or fetch from TFRecord data.

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@PawelSzczerbiak @moktayoglu