diff --git a/tests/scripts/fetch_test_data.sh b/tests/scripts/fetch_test_data.sh index 2975718..b5c9500 100644 --- a/tests/scripts/fetch_test_data.sh +++ b/tests/scripts/fetch_test_data.sh @@ -1,5 +1,6 @@ mkdir -p tests/data/dataset_2_submissions data/dataset_2_submissions tests/results tests/data/unprocessed_dataset_2_submissions/submission_x tests/data/Ground_truth/ data/Ground_truth wget https://files.osf.io/v1/resources/8h6fz/providers/dropbox/tests/dataset_2_submissions/test_submission_0_n8.pt?download=true -O tests/data/dataset_2_submissions/test_submission_0_n8.pt +ln -s tests/data/dataset_2_submissions/test_submission_0_n8.pt tests/data/dataset_2_submissions/submission_0.pt # symlink for svd which needs submission_0.pt for filename wget https://files.osf.io/v1/resources/8h6fz/providers/dropbox/tests/Ground_truth/test_maps_gt_flat_10.pt?download=true -O tests/data/Ground_truth/test_maps_gt_flat_10.pt wget https://files.osf.io/v1/resources/8h6fz/providers/dropbox/tests/Ground_truth/test_metadata_10.csv?download=true -O tests/data/Ground_truth/test_metadata_10.csv wget https://files.osf.io/v1/resources/8h6fz/providers/dropbox/tests/Ground_truth/1.mrc?download=true -O tests/data/Ground_truth/1.mrc diff --git a/tutorials/2_tutorial_svd.ipynb b/tutorials/2_tutorial_svd.ipynb index e0f33ac..b41bfba 100644 --- a/tutorials/2_tutorial_svd.ipynb +++ b/tutorials/2_tutorial_svd.ipynb @@ -2,7 +2,7 @@ "cells": [ { "cell_type": "code", - "execution_count": null, + "execution_count": 1, "metadata": {}, "outputs": [], "source": [ @@ -12,7 +12,7 @@ }, { "cell_type": "code", - "execution_count": null, + "execution_count": 2, "metadata": {}, "outputs": [], "source": [ @@ -40,9 +40,24 @@ }, { "cell_type": "code", - "execution_count": null, + "execution_count": 3, "metadata": {}, - "outputs": [], + "outputs": [ + { + "data": { + "application/vnd.jupyter.widget-view+json": { + "model_id": "c199472d76994ca7b2639a2709536f6d", + "version_major": 2, + "version_minor": 0 + }, + "text/plain": [ + "FileChooser(path='/mnt/home/gwoollard', filename='', title='', show_hidden=False, select_desc='Select', changeā€¦" + ] + }, + "metadata": {}, + "output_type": "display_data" + } + ], "source": [ "# Select path to SVD config file\n", "# An example of this file is available in the path ../config_files/config_svd.yaml\n",