From 9c44853a70f723767076b3b5543a9823876a4cc7 Mon Sep 17 00:00:00 2001 From: Geoffrey Woollard Date: Tue, 9 Jul 2024 13:50:47 -0400 Subject: [PATCH] header --- tutorials/README.md | 10 +++++----- 1 file changed, 5 insertions(+), 5 deletions(-) diff --git a/tutorials/README.md b/tutorials/README.md index 6459a30..d3488c7 100644 --- a/tutorials/README.md +++ b/tutorials/README.md @@ -2,27 +2,27 @@ There are notebook tutorials for the each step in the analysis pipeline. -1. `1_tutorial_preprocessing.ipynb` +### `1_tutorial_preprocessing.ipynb` - input: folders with respective 80 `.mrc` files and a `populations.txt` file - output: anonymized `submission_?.pt` files with aligned populations This notebok walks through how to align the raw submissions, and the various options in this step. -2. `2_tutorial_svd.ipynb` +### `2_tutorial_svd.ipynb` - input: `submission_?.pt` files - output: `svd_results.pt` This notebook walks through generating and analyzing (plots) the SVD results -3. `3_tutorial_map2map.ipynb` +### `3_tutorial_map2map.ipynb` - input: one `submission_?.pt` file - output: a `.pkl` file This notebook walks through generating and analyzing (plots) the map to map distance matrix results -4. `4_tutorial_distribution2distribution.ipynb` +### `4_tutorial_distribution2distribution.ipynb` - input: one `.pkl` file from the map2map step - output: a `.pkl` file -4. `5_tutorial_plotting.ipynb` +### `5_tutorial_plotting.ipynb` This notebook walks through parsing and analyzing (plots) the map to map and distribution to distribution results. \ No newline at end of file