From 22f7d4597ff85e73d6d2e53e1164bd0770e93422 Mon Sep 17 00:00:00 2001
From: Geoffrey Woollard <geoffwoollard@gmail.com>
Date: Thu, 20 Jun 2024 15:59:27 -0400
Subject: [PATCH] unit test. should pass in about 1 min

---
 ...est_config_map_to_map_distance_matrix.yaml | 26 +++++++++++++++++++
 ....py => test_map_to_map_distance_matrix.py} |  0
 2 files changed, 26 insertions(+)
 create mode 100644 config_files/test_config_map_to_map_distance_matrix.yaml
 rename tests/{test_map_to_map.py => test_map_to_map_distance_matrix.py} (100%)

diff --git a/config_files/test_config_map_to_map_distance_matrix.yaml b/config_files/test_config_map_to_map_distance_matrix.yaml
new file mode 100644
index 0000000..0398065
--- /dev/null
+++ b/config_files/test_config_map_to_map_distance_matrix.yaml
@@ -0,0 +1,26 @@
+data:
+  n_pix: 224
+  psize: 2.146 
+  submission:
+    fname: data/submission_0.pt
+    volume_key: volumes
+    metadata_key: populations
+    label_key: id
+  ground_truth:
+    volumes: data/test_maps_gt_flat.pt 
+    metadata: data/test_metadata.csv 
+  mask: 
+    do: true
+    volume: data/mask_dilated_wide_224x224.mrc
+analysis:
+  metrics:
+    - l2
+    # - corr
+    # - bioem
+    # - fsc
+  chunk_size_submission: 80
+  chunk_size_gt: 190
+  normalize:
+    do: true
+    method: median_zscore
+output: results/test_map_to_map_distance_matrix_submission_0.pkl
\ No newline at end of file
diff --git a/tests/test_map_to_map.py b/tests/test_map_to_map_distance_matrix.py
similarity index 100%
rename from tests/test_map_to_map.py
rename to tests/test_map_to_map_distance_matrix.py