- Introduction
- Error prone sequence data
- Error correction approaches
- De Bruijn Graphs
- Bloom Filter
- Methods
- Aligning reads to graph
- Pair HMM
- Match emissions
- Probabilities
- Simplifications
- Applications
- Diginorm
- Error correction
- Variant detection
- Graph search
- Aligning reads to graph
- Results
- Random Data
- HMP Mock Community
- Drosophila? Transcriptome?
- Timing compared to
- Discussion