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  • Introduction
    • Error prone sequence data
    • Error correction approaches
    • De Bruijn Graphs
    • Bloom Filter
  • Methods
    • Aligning reads to graph
      • Pair HMM
      • Match emissions
        • Probabilities
        • Simplifications
    • Applications
      • Diginorm
      • Error correction
    • Variant detection
    • Graph search
  • Results
    • Random Data
    • HMP Mock Community
    • Drosophila? Transcriptome?
    • Timing compared to
  • Discussion