Integration with FE description language #6477
8138 tests run, 3733 passed, 662 skipped, 3743 failed.
Annotations
Check failure on line 316 in tests/firedrake/regression/test_assemble.py
github-actions / Firedrake real
test_assemble.test_assemble_sparsity_no_redundant_entries
NotImplementedError: Non-Simplex elements are not yet supported
Raw output
def test_assemble_sparsity_no_redundant_entries():
mesh = UnitSquareMesh(2, 2, quadrilateral=True)
> V = FunctionSpace(mesh, "CG", 1)
tests/firedrake/regression/test_assemble.py:316:
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
petsc4py/PETSc/Log.pyx:188: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
petsc4py/PETSc/Log.pyx:189: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
firedrake/functionspace.py:105: in FunctionSpace
return impl.WithGeometry.make_function_space(mesh, element, name=name)
firedrake/functionspaceimpl.py:359: in make_function_space
mesh.init()
firedrake/mesh.py:2282: in init
self._callback(self)
firedrake/mesh.py:2304: in callback
coordinates_fs = functionspace.FunctionSpace(self.topology, self.ufl_coordinate_element())
petsc4py/PETSc/Log.pyx:188: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
petsc4py/PETSc/Log.pyx:189: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
firedrake/functionspace.py:105: in FunctionSpace
return impl.WithGeometry.make_function_space(mesh, element, name=name)
firedrake/functionspaceimpl.py:371: in make_function_space
new = FunctionSpace(topology, element, name=name)
petsc4py/PETSc/Log.pyx:188: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
petsc4py/PETSc/Log.pyx:189: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
firedrake/functionspaceimpl.py:520: in __init__
self.set_shared_data()
firedrake/functionspaceimpl.py:529: in set_shared_data
sdata = get_shared_data(self._mesh, element)
petsc4py/PETSc/Log.pyx:188: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
petsc4py/PETSc/Log.pyx:189: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
firedrake/functionspacedata.py:541: in get_shared_data
return FunctionSpaceData(mesh, ufl_element, boundary_set)
petsc4py/PETSc/Log.pyx:188: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
petsc4py/PETSc/Log.pyx:189: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
firedrake/functionspacedata.py:420: in __init__
finat_element = create_element(ufl_element)
petsc4py/PETSc/Log.pyx:188: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
petsc4py/PETSc/Log.pyx:189: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
firedrake/functionspacedata.py:42: in create_element
finat_element = _create_element(ufl_element)
tsfc/finatinterface.py:325: in create_element
finat_element, deps = _create_element(ufl_element,
tsfc/finatinterface.py:355: in _create_element
finat_element, deps = convert(ufl_element, **kwargs)
/usr/lib/python3.12/functools.py:909: in wrapper
return dispatch(args[0].__class__)(*args, **kw)
tsfc/finatinterface.py:263: in convert_tensorelement
inner_elem, deps = _create_element(element.sub_elements[0], **kwargs)
tsfc/finatinterface.py:355: in _create_element
finat_element, deps = convert(ufl_element, **kwargs)
/usr/lib/python3.12/functools.py:909: in wrapper
return dispatch(args[0].__class__)(*args, **kw)
tsfc/finatinterface.py:153: in convert_finiteelement
cell = as_fiat_cell(element.cell)
tsfc/finatinterface.py:116: in as_fiat_cell
return cell.to_fiat()
../firedrake_venv/src/redefining_fe/redefining_fe/cells.py:802: in to_fiat
return self.cell_complex.to_fiat()
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
self = f15
def to_fiat(self):
if len(self.get_topology()[self.dimension][0]) == self.dimension + 1:
return CellComplexToFiatSimplex(self)
> raise NotImplementedError("Non-Simplex elements are not yet supported")
E NotImplementedError: Non-Simplex elements are not yet supported
../firedrake_venv/src/redefining_fe/redefining_fe/cells.py:617: NotImplementedError
Check failure on line 72 in tests/firedrake/regression/test_zero_forms.py
github-actions / Firedrake real
test_zero_forms.test_math_functions[True-cos(f)*cos(f) + sin(f)*sin(f)--20-constant-tensor]
NotImplementedError: Non-Simplex elements are not yet supported
Raw output
mesh = Mesh(VectorElement(FiniteElement('Q', quadrilateral Complex, 1), dim=2), 38)
expr = 'cos(f)*cos(f) + sin(f)*sin(f)', value = -20, typ = 'constant'
fs_type = 'tensor'
@pytest.mark.parametrize(['expr', 'value', 'typ', 'fs_type'],
itertools.product(['f',
'2*f',
'tanh(f)',
'2 * tanh(f)',
'f + tanh(f)',
'cos(f) + sin(f)',
'cos(f)*cos(f) + sin(f)*sin(f)',
'tanh(f) + cos(f) + sin(f)',
'1.0/tanh(f) + 1.0/f',
'sqrt(f*f)',
'1.0/tanh(sqrt(f*f)) + 1.0/f + sqrt(f*f)'],
[1, 10, 20, -1, -10, -20],
['function', 'constant'],
['scalar', 'vector', 'tensor']))
def test_math_functions(mesh, expr, value, typ, fs_type):
if typ == 'function':
family, degree = 'CG', 1
elif typ == 'constant':
family, degree = 'Real', 0
if fs_type == "vector":
V = VectorFunctionSpace(mesh, family, degree)
elif fs_type == "tensor":
> V = TensorFunctionSpace(mesh, family, degree)
tests/firedrake/regression/test_zero_forms.py:72:
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
petsc4py/PETSc/Log.pyx:188: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
petsc4py/PETSc/Log.pyx:189: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
firedrake/functionspace.py:242: in TensorFunctionSpace
return FunctionSpace(mesh, element, name=name)
petsc4py/PETSc/Log.pyx:188: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
petsc4py/PETSc/Log.pyx:189: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
firedrake/functionspace.py:105: in FunctionSpace
return impl.WithGeometry.make_function_space(mesh, element, name=name)
firedrake/functionspaceimpl.py:359: in make_function_space
mesh.init()
firedrake/mesh.py:2282: in init
self._callback(self)
firedrake/mesh.py:2304: in callback
coordinates_fs = functionspace.FunctionSpace(self.topology, self.ufl_coordinate_element())
petsc4py/PETSc/Log.pyx:188: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
petsc4py/PETSc/Log.pyx:189: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
firedrake/functionspace.py:105: in FunctionSpace
return impl.WithGeometry.make_function_space(mesh, element, name=name)
firedrake/functionspaceimpl.py:371: in make_function_space
new = FunctionSpace(topology, element, name=name)
petsc4py/PETSc/Log.pyx:188: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
petsc4py/PETSc/Log.pyx:189: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
firedrake/functionspaceimpl.py:520: in __init__
self.set_shared_data()
firedrake/functionspaceimpl.py:529: in set_shared_data
sdata = get_shared_data(self._mesh, element)
petsc4py/PETSc/Log.pyx:188: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
petsc4py/PETSc/Log.pyx:189: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
firedrake/functionspacedata.py:541: in get_shared_data
return FunctionSpaceData(mesh, ufl_element, boundary_set)
petsc4py/PETSc/Log.pyx:188: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
petsc4py/PETSc/Log.pyx:189: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
firedrake/functionspacedata.py:420: in __init__
finat_element = create_element(ufl_element)
petsc4py/PETSc/Log.pyx:188: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
petsc4py/PETSc/Log.pyx:189: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
firedrake/functionspacedata.py:42: in create_element
finat_element = _create_element(ufl_element)
tsfc/finatinterface.py:325: in create_element
finat_element, deps = _create_element(ufl_element,
tsfc/finatinterface.py:355: in _create_element
finat_element, deps = convert(ufl_element, **kwargs)
/usr/lib/python3.12/functools.py:909: in wrapper
return dispatch(args[0].__class__)(*args, **kw)
tsfc/finatinterface.py:263: in convert_tensorelement
inner_elem, deps = _create_element(element.sub_elements[0], **kwargs)
tsfc/finatinterface.py:355: in _create_element
finat_element, deps = convert(ufl_element, **kwargs)
/usr/lib/python3.12/functools.py:909: in wrapper
return dispatch(args[0].__class__)(*args, **kw)
tsfc/finatinterface.py:153: in convert_finiteelement
cell = as_fiat_cell(element.cell)
tsfc/finatinterface.py:116: in as_fiat_cell
return cell.to_fiat()
../firedrake_venv/src/redefining_fe/redefining_fe/cells.py:802: in to_fiat
return self.cell_complex.to_fiat()
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
self = f15
def to_fiat(self):
if len(self.get_topology()[self.dimension][0]) == self.dimension + 1:
return CellComplexToFiatSimplex(self)
> raise NotImplementedError("Non-Simplex elements are not yet supported")
E NotImplementedError: Non-Simplex elements are not yet supported
../firedrake_venv/src/redefining_fe/redefining_fe/cells.py:617: NotImplementedError
Check failure on line 74 in tests/firedrake/regression/test_zero_forms.py
github-actions / Firedrake real
test_zero_forms.test_math_functions[True-tanh(f) + cos(f) + sin(f)-1-function-scalar]
NotImplementedError: Non-Simplex elements are not yet supported
Raw output
mesh = Mesh(VectorElement(FiniteElement('Q', quadrilateral Complex, 1), dim=2), 38)
expr = 'tanh(f) + cos(f) + sin(f)', value = 1, typ = 'function'
fs_type = 'scalar'
@pytest.mark.parametrize(['expr', 'value', 'typ', 'fs_type'],
itertools.product(['f',
'2*f',
'tanh(f)',
'2 * tanh(f)',
'f + tanh(f)',
'cos(f) + sin(f)',
'cos(f)*cos(f) + sin(f)*sin(f)',
'tanh(f) + cos(f) + sin(f)',
'1.0/tanh(f) + 1.0/f',
'sqrt(f*f)',
'1.0/tanh(sqrt(f*f)) + 1.0/f + sqrt(f*f)'],
[1, 10, 20, -1, -10, -20],
['function', 'constant'],
['scalar', 'vector', 'tensor']))
def test_math_functions(mesh, expr, value, typ, fs_type):
if typ == 'function':
family, degree = 'CG', 1
elif typ == 'constant':
family, degree = 'Real', 0
if fs_type == "vector":
V = VectorFunctionSpace(mesh, family, degree)
elif fs_type == "tensor":
V = TensorFunctionSpace(mesh, family, degree)
else:
> V = FunctionSpace(mesh, family, degree)
tests/firedrake/regression/test_zero_forms.py:74:
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
petsc4py/PETSc/Log.pyx:188: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
petsc4py/PETSc/Log.pyx:189: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
firedrake/functionspace.py:105: in FunctionSpace
return impl.WithGeometry.make_function_space(mesh, element, name=name)
firedrake/functionspaceimpl.py:371: in make_function_space
new = FunctionSpace(topology, element, name=name)
petsc4py/PETSc/Log.pyx:188: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
petsc4py/PETSc/Log.pyx:189: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
firedrake/functionspaceimpl.py:520: in __init__
self.set_shared_data()
firedrake/functionspaceimpl.py:529: in set_shared_data
sdata = get_shared_data(self._mesh, element)
petsc4py/PETSc/Log.pyx:188: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
petsc4py/PETSc/Log.pyx:189: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
firedrake/functionspacedata.py:541: in get_shared_data
return FunctionSpaceData(mesh, ufl_element, boundary_set)
petsc4py/PETSc/Log.pyx:188: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
petsc4py/PETSc/Log.pyx:189: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
firedrake/functionspacedata.py:420: in __init__
finat_element = create_element(ufl_element)
petsc4py/PETSc/Log.pyx:188: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
petsc4py/PETSc/Log.pyx:189: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
firedrake/functionspacedata.py:42: in create_element
finat_element = _create_element(ufl_element)
tsfc/finatinterface.py:325: in create_element
finat_element, deps = _create_element(ufl_element,
tsfc/finatinterface.py:355: in _create_element
finat_element, deps = convert(ufl_element, **kwargs)
/usr/lib/python3.12/functools.py:909: in wrapper
return dispatch(args[0].__class__)(*args, **kw)
tsfc/finatinterface.py:153: in convert_finiteelement
cell = as_fiat_cell(element.cell)
tsfc/finatinterface.py:116: in as_fiat_cell
return cell.to_fiat()
../firedrake_venv/src/redefining_fe/redefining_fe/cells.py:802: in to_fiat
return self.cell_complex.to_fiat()
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
self = f15
def to_fiat(self):
if len(self.get_topology()[self.dimension][0]) == self.dimension + 1:
return CellComplexToFiatSimplex(self)
> raise NotImplementedError("Non-Simplex elements are not yet supported")
E NotImplementedError: Non-Simplex elements are not yet supported
../firedrake_venv/src/redefining_fe/redefining_fe/cells.py:617: NotImplementedError
Check failure on line 329 in tests/firedrake/regression/test_assemble.py
github-actions / Firedrake real
test_assemble.test_assemble_sparsity_diagonal_entries_for_bc
NotImplementedError: Non-Simplex elements are not yet supported
Raw output
def test_assemble_sparsity_diagonal_entries_for_bc():
mesh = UnitSquareMesh(1, 1, quadrilateral=True)
> V = FunctionSpace(mesh, "CG", 1)
tests/firedrake/regression/test_assemble.py:329:
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
petsc4py/PETSc/Log.pyx:188: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
petsc4py/PETSc/Log.pyx:189: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
firedrake/functionspace.py:105: in FunctionSpace
return impl.WithGeometry.make_function_space(mesh, element, name=name)
firedrake/functionspaceimpl.py:359: in make_function_space
mesh.init()
firedrake/mesh.py:2282: in init
self._callback(self)
firedrake/mesh.py:2304: in callback
coordinates_fs = functionspace.FunctionSpace(self.topology, self.ufl_coordinate_element())
petsc4py/PETSc/Log.pyx:188: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
petsc4py/PETSc/Log.pyx:189: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
firedrake/functionspace.py:105: in FunctionSpace
return impl.WithGeometry.make_function_space(mesh, element, name=name)
firedrake/functionspaceimpl.py:371: in make_function_space
new = FunctionSpace(topology, element, name=name)
petsc4py/PETSc/Log.pyx:188: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
petsc4py/PETSc/Log.pyx:189: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
firedrake/functionspaceimpl.py:520: in __init__
self.set_shared_data()
firedrake/functionspaceimpl.py:529: in set_shared_data
sdata = get_shared_data(self._mesh, element)
petsc4py/PETSc/Log.pyx:188: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
petsc4py/PETSc/Log.pyx:189: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
firedrake/functionspacedata.py:541: in get_shared_data
return FunctionSpaceData(mesh, ufl_element, boundary_set)
petsc4py/PETSc/Log.pyx:188: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
petsc4py/PETSc/Log.pyx:189: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
firedrake/functionspacedata.py:420: in __init__
finat_element = create_element(ufl_element)
petsc4py/PETSc/Log.pyx:188: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
petsc4py/PETSc/Log.pyx:189: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
firedrake/functionspacedata.py:42: in create_element
finat_element = _create_element(ufl_element)
tsfc/finatinterface.py:325: in create_element
finat_element, deps = _create_element(ufl_element,
tsfc/finatinterface.py:355: in _create_element
finat_element, deps = convert(ufl_element, **kwargs)
/usr/lib/python3.12/functools.py:909: in wrapper
return dispatch(args[0].__class__)(*args, **kw)
tsfc/finatinterface.py:263: in convert_tensorelement
inner_elem, deps = _create_element(element.sub_elements[0], **kwargs)
tsfc/finatinterface.py:355: in _create_element
finat_element, deps = convert(ufl_element, **kwargs)
/usr/lib/python3.12/functools.py:909: in wrapper
return dispatch(args[0].__class__)(*args, **kw)
tsfc/finatinterface.py:153: in convert_finiteelement
cell = as_fiat_cell(element.cell)
tsfc/finatinterface.py:116: in as_fiat_cell
return cell.to_fiat()
../firedrake_venv/src/redefining_fe/redefining_fe/cells.py:802: in to_fiat
return self.cell_complex.to_fiat()
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
self = f24
def to_fiat(self):
if len(self.get_topology()[self.dimension][0]) == self.dimension + 1:
return CellComplexToFiatSimplex(self)
> raise NotImplementedError("Non-Simplex elements are not yet supported")
E NotImplementedError: Non-Simplex elements are not yet supported
../firedrake_venv/src/redefining_fe/redefining_fe/cells.py:617: NotImplementedError
Check failure on line 70 in tests/firedrake/regression/test_zero_forms.py
github-actions / Firedrake real
test_zero_forms.test_math_functions[True-tanh(f) + cos(f) + sin(f)-1-function-vector]
NotImplementedError: Non-Simplex elements are not yet supported
Raw output
mesh = Mesh(VectorElement(FiniteElement('Q', quadrilateral Complex, 1), dim=2), 38)
expr = 'tanh(f) + cos(f) + sin(f)', value = 1, typ = 'function'
fs_type = 'vector'
@pytest.mark.parametrize(['expr', 'value', 'typ', 'fs_type'],
itertools.product(['f',
'2*f',
'tanh(f)',
'2 * tanh(f)',
'f + tanh(f)',
'cos(f) + sin(f)',
'cos(f)*cos(f) + sin(f)*sin(f)',
'tanh(f) + cos(f) + sin(f)',
'1.0/tanh(f) + 1.0/f',
'sqrt(f*f)',
'1.0/tanh(sqrt(f*f)) + 1.0/f + sqrt(f*f)'],
[1, 10, 20, -1, -10, -20],
['function', 'constant'],
['scalar', 'vector', 'tensor']))
def test_math_functions(mesh, expr, value, typ, fs_type):
if typ == 'function':
family, degree = 'CG', 1
elif typ == 'constant':
family, degree = 'Real', 0
if fs_type == "vector":
> V = VectorFunctionSpace(mesh, family, degree)
tests/firedrake/regression/test_zero_forms.py:70:
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
petsc4py/PETSc/Log.pyx:188: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
petsc4py/PETSc/Log.pyx:189: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
firedrake/functionspace.py:191: in VectorFunctionSpace
return FunctionSpace(mesh, element, name=name)
petsc4py/PETSc/Log.pyx:188: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
petsc4py/PETSc/Log.pyx:189: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
firedrake/functionspace.py:105: in FunctionSpace
return impl.WithGeometry.make_function_space(mesh, element, name=name)
firedrake/functionspaceimpl.py:371: in make_function_space
new = FunctionSpace(topology, element, name=name)
petsc4py/PETSc/Log.pyx:188: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
petsc4py/PETSc/Log.pyx:189: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
firedrake/functionspaceimpl.py:520: in __init__
self.set_shared_data()
firedrake/functionspaceimpl.py:529: in set_shared_data
sdata = get_shared_data(self._mesh, element)
petsc4py/PETSc/Log.pyx:188: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
petsc4py/PETSc/Log.pyx:189: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
firedrake/functionspacedata.py:541: in get_shared_data
return FunctionSpaceData(mesh, ufl_element, boundary_set)
petsc4py/PETSc/Log.pyx:188: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
petsc4py/PETSc/Log.pyx:189: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
firedrake/functionspacedata.py:420: in __init__
finat_element = create_element(ufl_element)
petsc4py/PETSc/Log.pyx:188: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
petsc4py/PETSc/Log.pyx:189: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
firedrake/functionspacedata.py:42: in create_element
finat_element = _create_element(ufl_element)
tsfc/finatinterface.py:325: in create_element
finat_element, deps = _create_element(ufl_element,
tsfc/finatinterface.py:355: in _create_element
finat_element, deps = convert(ufl_element, **kwargs)
/usr/lib/python3.12/functools.py:909: in wrapper
return dispatch(args[0].__class__)(*args, **kw)
tsfc/finatinterface.py:263: in convert_tensorelement
inner_elem, deps = _create_element(element.sub_elements[0], **kwargs)
tsfc/finatinterface.py:355: in _create_element
finat_element, deps = convert(ufl_element, **kwargs)
/usr/lib/python3.12/functools.py:909: in wrapper
return dispatch(args[0].__class__)(*args, **kw)
tsfc/finatinterface.py:153: in convert_finiteelement
cell = as_fiat_cell(element.cell)
tsfc/finatinterface.py:116: in as_fiat_cell
return cell.to_fiat()
../firedrake_venv/src/redefining_fe/redefining_fe/cells.py:802: in to_fiat
return self.cell_complex.to_fiat()
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
self = f15
def to_fiat(self):
if len(self.get_topology()[self.dimension][0]) == self.dimension + 1:
return CellComplexToFiatSimplex(self)
> raise NotImplementedError("Non-Simplex elements are not yet supported")
E NotImplementedError: Non-Simplex elements are not yet supported
../firedrake_venv/src/redefining_fe/redefining_fe/cells.py:617: NotImplementedError
Check failure on line 70 in tests/firedrake/submesh/test_submesh_interpolate.py
github-actions / Firedrake real
test_submesh_interpolate.test_submesh_interpolate_cell_cell_hex_1_processes[None-LT-LT-LT-fe_fesub1-4]
TypeError: Cell complex construction undefined for hexahedron
Raw output
fe_fesub = [('Q', 4), ('DQ', 5)], nelem = 4
condx = <class 'ufl.conditional.LT'>, condy = <class 'ufl.conditional.LT'>
condz = <class 'ufl.conditional.LT'>, distribution_parameters = None
@pytest.mark.parametrize('nelem', [2, 4, 8, None])
@pytest.mark.parametrize('fe_fesub', [[("DQ", 0), ("DQ", 0)],
[("Q", 4), ("DQ", 5)]])
@pytest.mark.parametrize('condx', [LT])
@pytest.mark.parametrize('condy', [LT])
@pytest.mark.parametrize('condz', [LT])
@pytest.mark.parametrize('distribution_parameters', [None, {"overlap_type": (DistributedMeshOverlapType.NONE, 0)}])
def test_submesh_interpolate_cell_cell_hex_1_processes(fe_fesub, nelem, condx, condy, condz, distribution_parameters):
if nelem is None:
mesh = Mesh(join(cwd, "..", "meshes", "cube_hex.msh"), distribution_parameters=distribution_parameters)
else:
> mesh = UnitCubeMesh(nelem, nelem, nelem, hexahedral=True, distribution_parameters=distribution_parameters)
tests/firedrake/submesh/test_submesh_interpolate.py:70:
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
petsc4py/PETSc/Log.pyx:188: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
petsc4py/PETSc/Log.pyx:189: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
firedrake/utility_meshes.py:1780: in UnitCubeMesh
return CubeMesh(
petsc4py/PETSc/Log.pyx:188: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
petsc4py/PETSc/Log.pyx:189: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
firedrake/utility_meshes.py:1723: in CubeMesh
return BoxMesh(
petsc4py/PETSc/Log.pyx:188: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
petsc4py/PETSc/Log.pyx:189: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
firedrake/utility_meshes.py:1653: in BoxMesh
m = mesh.Mesh(
petsc4py/PETSc/Log.pyx:188: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
petsc4py/PETSc/Log.pyx:189: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
firedrake/mesh.py:3093: in Mesh
mesh = make_mesh_from_mesh_topology(topology, name)
firedrake/mesh.py:2884: in make_mesh_from_mesh_topology
cell = topology.ufl_cell()
firedrake/mesh.py:731: in ufl_cell
return self._ufl_cell
/usr/lib/python3.12/functools.py:995: in __get__
val = self.func(instance)
firedrake/mesh.py:1227: in _ufl_cell
return constructCellComplex(_cells[tdim][nfacets])
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
name = 'hexahedron'
def constructCellComplex(name):
if name == "vertex":
return Point(0).to_ufl(name)
elif name == "interval":
return Point(1, [Point(0), Point(0)], vertex_num=2).to_ufl(name)
elif name == "triangle":
return n_sided_polygon(3).to_ufl(name)
elif name == "quadrilateral":
# return Cell(name)
return n_sided_polygon(4).to_ufl(name)
elif name == "tetrahedron":
return make_tetrahedron().to_ufl(name)
else:
> raise TypeError("Cell complex construction undefined for {}".format(str(name)))
E TypeError: Cell complex construction undefined for hexahedron
../firedrake_venv/src/redefining_fe/redefining_fe/cells.py:831: TypeError
Check failure on line 72 in tests/firedrake/regression/test_zero_forms.py
github-actions / Firedrake real
test_zero_forms.test_math_functions[True-tanh(f) + cos(f) + sin(f)-1-function-tensor]
NotImplementedError: Non-Simplex elements are not yet supported
Raw output
mesh = Mesh(VectorElement(FiniteElement('Q', quadrilateral Complex, 1), dim=2), 38)
expr = 'tanh(f) + cos(f) + sin(f)', value = 1, typ = 'function'
fs_type = 'tensor'
@pytest.mark.parametrize(['expr', 'value', 'typ', 'fs_type'],
itertools.product(['f',
'2*f',
'tanh(f)',
'2 * tanh(f)',
'f + tanh(f)',
'cos(f) + sin(f)',
'cos(f)*cos(f) + sin(f)*sin(f)',
'tanh(f) + cos(f) + sin(f)',
'1.0/tanh(f) + 1.0/f',
'sqrt(f*f)',
'1.0/tanh(sqrt(f*f)) + 1.0/f + sqrt(f*f)'],
[1, 10, 20, -1, -10, -20],
['function', 'constant'],
['scalar', 'vector', 'tensor']))
def test_math_functions(mesh, expr, value, typ, fs_type):
if typ == 'function':
family, degree = 'CG', 1
elif typ == 'constant':
family, degree = 'Real', 0
if fs_type == "vector":
V = VectorFunctionSpace(mesh, family, degree)
elif fs_type == "tensor":
> V = TensorFunctionSpace(mesh, family, degree)
tests/firedrake/regression/test_zero_forms.py:72:
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
petsc4py/PETSc/Log.pyx:188: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
petsc4py/PETSc/Log.pyx:189: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
firedrake/functionspace.py:242: in TensorFunctionSpace
return FunctionSpace(mesh, element, name=name)
petsc4py/PETSc/Log.pyx:188: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
petsc4py/PETSc/Log.pyx:189: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
firedrake/functionspace.py:105: in FunctionSpace
return impl.WithGeometry.make_function_space(mesh, element, name=name)
firedrake/functionspaceimpl.py:371: in make_function_space
new = FunctionSpace(topology, element, name=name)
petsc4py/PETSc/Log.pyx:188: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
petsc4py/PETSc/Log.pyx:189: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
firedrake/functionspaceimpl.py:520: in __init__
self.set_shared_data()
firedrake/functionspaceimpl.py:529: in set_shared_data
sdata = get_shared_data(self._mesh, element)
petsc4py/PETSc/Log.pyx:188: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
petsc4py/PETSc/Log.pyx:189: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
firedrake/functionspacedata.py:541: in get_shared_data
return FunctionSpaceData(mesh, ufl_element, boundary_set)
petsc4py/PETSc/Log.pyx:188: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
petsc4py/PETSc/Log.pyx:189: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
firedrake/functionspacedata.py:420: in __init__
finat_element = create_element(ufl_element)
petsc4py/PETSc/Log.pyx:188: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
petsc4py/PETSc/Log.pyx:189: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
firedrake/functionspacedata.py:42: in create_element
finat_element = _create_element(ufl_element)
tsfc/finatinterface.py:325: in create_element
finat_element, deps = _create_element(ufl_element,
tsfc/finatinterface.py:355: in _create_element
finat_element, deps = convert(ufl_element, **kwargs)
/usr/lib/python3.12/functools.py:909: in wrapper
return dispatch(args[0].__class__)(*args, **kw)
tsfc/finatinterface.py:263: in convert_tensorelement
inner_elem, deps = _create_element(element.sub_elements[0], **kwargs)
tsfc/finatinterface.py:355: in _create_element
finat_element, deps = convert(ufl_element, **kwargs)
/usr/lib/python3.12/functools.py:909: in wrapper
return dispatch(args[0].__class__)(*args, **kw)
tsfc/finatinterface.py:153: in convert_finiteelement
cell = as_fiat_cell(element.cell)
tsfc/finatinterface.py:116: in as_fiat_cell
return cell.to_fiat()
../firedrake_venv/src/redefining_fe/redefining_fe/cells.py:802: in to_fiat
return self.cell_complex.to_fiat()
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
self = f15
def to_fiat(self):
if len(self.get_topology()[self.dimension][0]) == self.dimension + 1:
return CellComplexToFiatSimplex(self)
> raise NotImplementedError("Non-Simplex elements are not yet supported")
E NotImplementedError: Non-Simplex elements are not yet supported
../firedrake_venv/src/redefining_fe/redefining_fe/cells.py:617: NotImplementedError
Check failure on line 218 in tests/firedrake/vertexonly/test_interpolation_from_parent.py
github-actions / Firedrake real
test_interpolation_from_parent.test_vector_function_interpolation[squarequads-mesh-100-coords-VectorFunctionSpace(CG2)]
NotImplementedError: Non-Simplex elements are not yet supported
Raw output
parentmesh = Mesh(VectorElement(FiniteElement('Q', quadrilateral Complex, 1), dim=2), 40)
vertexcoords = array([[ 0.59762701, 0.93037873],
[ 0.70552675, 0.58976637],
[ 0.3473096 , 0.79178823],
[ 0.37... 1.38874478],
[ 0.97910159, 0.48091762],
[-0.04517074, 0.00871296],
[-0.38394168, 0.36883325]])
vfs = ('CG', 2, <cyfunction VectorFunctionSpace at 0x7f5c32fe3d30>)
def test_vector_function_interpolation(parentmesh, vertexcoords, vfs):
if parentmesh.name == "immersedsphere":
vertexcoords = immersed_sphere_vertexcoords(parentmesh, vertexcoords)
vfs_fam, vfs_deg, vfs_typ = vfs
> vm = VertexOnlyMesh(parentmesh, vertexcoords, missing_points_behaviour=None)
tests/firedrake/vertexonly/test_interpolation_from_parent.py:218:
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
petsc4py/PETSc/Log.pyx:188: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
petsc4py/PETSc/Log.pyx:189: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
firedrake/mesh.py:3340: in VertexOnlyMesh
mesh.init()
firedrake/mesh.py:2282: in init
self._callback(self)
firedrake/mesh.py:2304: in callback
coordinates_fs = functionspace.FunctionSpace(self.topology, self.ufl_coordinate_element())
petsc4py/PETSc/Log.pyx:188: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
petsc4py/PETSc/Log.pyx:189: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
firedrake/functionspace.py:105: in FunctionSpace
return impl.WithGeometry.make_function_space(mesh, element, name=name)
firedrake/functionspaceimpl.py:371: in make_function_space
new = FunctionSpace(topology, element, name=name)
petsc4py/PETSc/Log.pyx:188: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
petsc4py/PETSc/Log.pyx:189: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
firedrake/functionspaceimpl.py:520: in __init__
self.set_shared_data()
firedrake/functionspaceimpl.py:529: in set_shared_data
sdata = get_shared_data(self._mesh, element)
petsc4py/PETSc/Log.pyx:188: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
petsc4py/PETSc/Log.pyx:189: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
firedrake/functionspacedata.py:541: in get_shared_data
return FunctionSpaceData(mesh, ufl_element, boundary_set)
petsc4py/PETSc/Log.pyx:188: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
petsc4py/PETSc/Log.pyx:189: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
firedrake/functionspacedata.py:420: in __init__
finat_element = create_element(ufl_element)
petsc4py/PETSc/Log.pyx:188: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
petsc4py/PETSc/Log.pyx:189: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
firedrake/functionspacedata.py:42: in create_element
finat_element = _create_element(ufl_element)
tsfc/finatinterface.py:325: in create_element
finat_element, deps = _create_element(ufl_element,
tsfc/finatinterface.py:355: in _create_element
finat_element, deps = convert(ufl_element, **kwargs)
/usr/lib/python3.12/functools.py:909: in wrapper
return dispatch(args[0].__class__)(*args, **kw)
tsfc/finatinterface.py:263: in convert_tensorelement
inner_elem, deps = _create_element(element.sub_elements[0], **kwargs)
tsfc/finatinterface.py:355: in _create_element
finat_element, deps = convert(ufl_element, **kwargs)
/usr/lib/python3.12/functools.py:909: in wrapper
return dispatch(args[0].__class__)(*args, **kw)
tsfc/finatinterface.py:153: in convert_finiteelement
cell = as_fiat_cell(element.cell)
tsfc/finatinterface.py:116: in as_fiat_cell
return cell.to_fiat()
../firedrake_venv/src/redefining_fe/redefining_fe/cells.py:802: in to_fiat
return self.cell_complex.to_fiat()
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
self = f33
def to_fiat(self):
if len(self.get_topology()[self.dimension][0]) == self.dimension + 1:
return CellComplexToFiatSimplex(self)
> raise NotImplementedError("Non-Simplex elements are not yet supported")
E NotImplementedError: Non-Simplex elements are not yet supported
../firedrake_venv/src/redefining_fe/redefining_fe/cells.py:617: NotImplementedError
Check failure on line 70 in tests/firedrake/submesh/test_submesh_interpolate.py
github-actions / Firedrake real
test_submesh_interpolate.test_submesh_interpolate_cell_cell_hex_1_processes[None-LT-LT-LT-fe_fesub1-8]
TypeError: Cell complex construction undefined for hexahedron
Raw output
fe_fesub = [('Q', 4), ('DQ', 5)], nelem = 8
condx = <class 'ufl.conditional.LT'>, condy = <class 'ufl.conditional.LT'>
condz = <class 'ufl.conditional.LT'>, distribution_parameters = None
@pytest.mark.parametrize('nelem', [2, 4, 8, None])
@pytest.mark.parametrize('fe_fesub', [[("DQ", 0), ("DQ", 0)],
[("Q", 4), ("DQ", 5)]])
@pytest.mark.parametrize('condx', [LT])
@pytest.mark.parametrize('condy', [LT])
@pytest.mark.parametrize('condz', [LT])
@pytest.mark.parametrize('distribution_parameters', [None, {"overlap_type": (DistributedMeshOverlapType.NONE, 0)}])
def test_submesh_interpolate_cell_cell_hex_1_processes(fe_fesub, nelem, condx, condy, condz, distribution_parameters):
if nelem is None:
mesh = Mesh(join(cwd, "..", "meshes", "cube_hex.msh"), distribution_parameters=distribution_parameters)
else:
> mesh = UnitCubeMesh(nelem, nelem, nelem, hexahedral=True, distribution_parameters=distribution_parameters)
tests/firedrake/submesh/test_submesh_interpolate.py:70:
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
petsc4py/PETSc/Log.pyx:188: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
petsc4py/PETSc/Log.pyx:189: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
firedrake/utility_meshes.py:1780: in UnitCubeMesh
return CubeMesh(
petsc4py/PETSc/Log.pyx:188: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
petsc4py/PETSc/Log.pyx:189: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
firedrake/utility_meshes.py:1723: in CubeMesh
return BoxMesh(
petsc4py/PETSc/Log.pyx:188: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
petsc4py/PETSc/Log.pyx:189: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
firedrake/utility_meshes.py:1653: in BoxMesh
m = mesh.Mesh(
petsc4py/PETSc/Log.pyx:188: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
petsc4py/PETSc/Log.pyx:189: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
firedrake/mesh.py:3093: in Mesh
mesh = make_mesh_from_mesh_topology(topology, name)
firedrake/mesh.py:2884: in make_mesh_from_mesh_topology
cell = topology.ufl_cell()
firedrake/mesh.py:731: in ufl_cell
return self._ufl_cell
/usr/lib/python3.12/functools.py:995: in __get__
val = self.func(instance)
firedrake/mesh.py:1227: in _ufl_cell
return constructCellComplex(_cells[tdim][nfacets])
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
name = 'hexahedron'
def constructCellComplex(name):
if name == "vertex":
return Point(0).to_ufl(name)
elif name == "interval":
return Point(1, [Point(0), Point(0)], vertex_num=2).to_ufl(name)
elif name == "triangle":
return n_sided_polygon(3).to_ufl(name)
elif name == "quadrilateral":
# return Cell(name)
return n_sided_polygon(4).to_ufl(name)
elif name == "tetrahedron":
return make_tetrahedron().to_ufl(name)
else:
> raise TypeError("Cell complex construction undefined for {}".format(str(name)))
E TypeError: Cell complex construction undefined for hexahedron
../firedrake_venv/src/redefining_fe/redefining_fe/cells.py:831: TypeError
Check failure on line 82 in tests/firedrake/regression/test_zero_forms.py
github-actions / Firedrake real
test_zero_forms.test_math_functions[True-tanh(f) + cos(f) + sin(f)-1-constant-scalar]
AttributeError: 'MeshTopology' object has no attribute 'extruded'
Raw output
mesh = Mesh(VectorElement(FiniteElement('Q', quadrilateral Complex, 1), dim=2), 38)
expr = 'tanh(f) + cos(f) + sin(f)', value = 1, typ = 'constant'
fs_type = 'scalar'
@pytest.mark.parametrize(['expr', 'value', 'typ', 'fs_type'],
itertools.product(['f',
'2*f',
'tanh(f)',
'2 * tanh(f)',
'f + tanh(f)',
'cos(f) + sin(f)',
'cos(f)*cos(f) + sin(f)*sin(f)',
'tanh(f) + cos(f) + sin(f)',
'1.0/tanh(f) + 1.0/f',
'sqrt(f*f)',
'1.0/tanh(sqrt(f*f)) + 1.0/f + sqrt(f*f)'],
[1, 10, 20, -1, -10, -20],
['function', 'constant'],
['scalar', 'vector', 'tensor']))
def test_math_functions(mesh, expr, value, typ, fs_type):
if typ == 'function':
family, degree = 'CG', 1
elif typ == 'constant':
family, degree = 'Real', 0
if fs_type == "vector":
V = VectorFunctionSpace(mesh, family, degree)
elif fs_type == "tensor":
V = TensorFunctionSpace(mesh, family, degree)
else:
V = FunctionSpace(mesh, family, degree)
f = Function(V)
f.assign(value)
if fs_type == "vector":
f = dot(f, f)
elif fs_type == "tensor":
f = inner(f, f)
> actual = assemble(eval(expr)*dx)
tests/firedrake/regression/test_zero_forms.py:82:
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
petsc4py/PETSc/Log.pyx:188: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
petsc4py/PETSc/Log.pyx:189: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
firedrake/adjoint_utils/assembly.py:30: in wrapper
output = assemble(form, *args, **kwargs)
firedrake/assemble.py:134: in assemble
return get_assembler(expr, *args, **kwargs).assemble(tensor=tensor)
firedrake/assemble.py:983: in assemble
self.execute_parloops(tensor)
firedrake/assemble.py:1004: in execute_parloops
for parloop in self.parloops(tensor):
firedrake/assemble.py:1016: in parloops
for local_kernel, subdomain_id in self.local_kernels:
/usr/lib/python3.12/functools.py:995: in __get__
val = self.func(instance)
firedrake/assemble.py:1054: in local_kernels
kernels = tsfc_interface.compile_form(
petsc4py/PETSc/Log.pyx:188: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
petsc4py/PETSc/Log.pyx:189: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
pyop2/caching.py:522: in wrapper
k = hashkey(*args, **kwargs)
firedrake/tsfc_interface.py:140: in _compile_form_hashkey
args[0].signature(),
../firedrake_venv/src/ufl/ufl/form.py:418: in signature
self._compute_signature()
../firedrake_venv/src/ufl/ufl/form.py:671: in _compute_signature
self._signature = compute_form_signature(self, self._compute_renumbering())
../firedrake_venv/src/ufl/ufl/algorithms/signature.py:137: in compute_form_signature
terminal_hashdata = compute_terminal_hashdata(integrands, renumbering)
../firedrake_venv/src/ufl/ufl/algorithms/signature.py:65: in compute_terminal_hashdata
data = expr._ufl_signature_data_(renumbering)
../firedrake_venv/src/ufl/ufl/coefficient.py:84: in _ufl_signature_data_
fsdata = self._ufl_function_space._ufl_signature_data_(renumbering)
firedrake/functionspaceimpl.py:131: in _ufl_signature_data_
super()._ufl_signature_data_(*args, **kwargs))
../firedrake_venv/src/ufl/ufl/functionspace.py:176: in _ufl_signature_data_
return BaseFunctionSpace._ufl_signature_data_(self, renumbering, "FunctionSpace")
../firedrake_venv/src/ufl/ufl/functionspace.py:138: in _ufl_signature_data_
ddata = domain._ufl_signature_data_(renumbering)
firedrake/mesh.py:2273: in _ufl_signature_data_
return (type(self), self.extruded, self.variable_layers,
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
self = Mesh(VectorElement(FiniteElement('Q', quadrilateral Complex, 1), dim=2), 38)
name = 'extruded'
def __getattr__(self, name):
> val = getattr(self._topology, name)
E AttributeError: 'MeshTopology' object has no attribute 'extruded'
firedrake/mesh.py:2796: AttributeError
Check failure on line 203 in tests/firedrake/regression/test_function_spaces.py
github-actions / Firedrake real
test_function_spaces.test_reconstruct_mesh[quad-triangle-dual]
NotImplementedError: Non-Simplex elements are not yet supported
Raw output
meshes = (Mesh(VectorElement(FiniteElement('Q', quadrilateral Complex, 1), dim=2), 116), Mesh(VectorElement(FiniteElement('Lagrange', triangle Complex, 1), dim=2), 117))
dual = True
def test_reconstruct_mesh(meshes, dual):
> V1 = FunctionSpace(meshes[0], "Lagrange", 1)
tests/firedrake/regression/test_function_spaces.py:203:
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
petsc4py/PETSc/Log.pyx:188: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
petsc4py/PETSc/Log.pyx:189: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
firedrake/functionspace.py:105: in FunctionSpace
return impl.WithGeometry.make_function_space(mesh, element, name=name)
firedrake/functionspaceimpl.py:359: in make_function_space
mesh.init()
firedrake/mesh.py:2282: in init
self._callback(self)
firedrake/mesh.py:2304: in callback
coordinates_fs = functionspace.FunctionSpace(self.topology, self.ufl_coordinate_element())
petsc4py/PETSc/Log.pyx:188: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
petsc4py/PETSc/Log.pyx:189: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
firedrake/functionspace.py:105: in FunctionSpace
return impl.WithGeometry.make_function_space(mesh, element, name=name)
firedrake/functionspaceimpl.py:371: in make_function_space
new = FunctionSpace(topology, element, name=name)
petsc4py/PETSc/Log.pyx:188: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
petsc4py/PETSc/Log.pyx:189: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
firedrake/functionspaceimpl.py:520: in __init__
self.set_shared_data()
firedrake/functionspaceimpl.py:529: in set_shared_data
sdata = get_shared_data(self._mesh, element)
petsc4py/PETSc/Log.pyx:188: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
petsc4py/PETSc/Log.pyx:189: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
firedrake/functionspacedata.py:541: in get_shared_data
return FunctionSpaceData(mesh, ufl_element, boundary_set)
petsc4py/PETSc/Log.pyx:188: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
petsc4py/PETSc/Log.pyx:189: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
firedrake/functionspacedata.py:420: in __init__
finat_element = create_element(ufl_element)
petsc4py/PETSc/Log.pyx:188: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
petsc4py/PETSc/Log.pyx:189: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
firedrake/functionspacedata.py:42: in create_element
finat_element = _create_element(ufl_element)
tsfc/finatinterface.py:325: in create_element
finat_element, deps = _create_element(ufl_element,
tsfc/finatinterface.py:355: in _create_element
finat_element, deps = convert(ufl_element, **kwargs)
/usr/lib/python3.12/functools.py:909: in wrapper
return dispatch(args[0].__class__)(*args, **kw)
tsfc/finatinterface.py:263: in convert_tensorelement
inner_elem, deps = _create_element(element.sub_elements[0], **kwargs)
tsfc/finatinterface.py:355: in _create_element
finat_element, deps = convert(ufl_element, **kwargs)
/usr/lib/python3.12/functools.py:909: in wrapper
return dispatch(args[0].__class__)(*args, **kw)
tsfc/finatinterface.py:153: in convert_finiteelement
cell = as_fiat_cell(element.cell)
tsfc/finatinterface.py:116: in as_fiat_cell
return cell.to_fiat()
../firedrake_venv/src/redefining_fe/redefining_fe/cells.py:802: in to_fiat
return self.cell_complex.to_fiat()
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
self = f151
def to_fiat(self):
if len(self.get_topology()[self.dimension][0]) == self.dimension + 1:
return CellComplexToFiatSimplex(self)
> raise NotImplementedError("Non-Simplex elements are not yet supported")
E NotImplementedError: Non-Simplex elements are not yet supported
../firedrake_venv/src/redefining_fe/redefining_fe/cells.py:617: NotImplementedError
Check failure on line 68 in tests/firedrake/submesh/test_submesh_interpolate.py
github-actions / Firedrake real
test_submesh_interpolate.test_submesh_interpolate_cell_cell_hex_1_processes[None-LT-LT-LT-fe_fesub1-None]
TypeError: Cell complex construction undefined for hexahedron
Raw output
fe_fesub = [('Q', 4), ('DQ', 5)], nelem = None
condx = <class 'ufl.conditional.LT'>, condy = <class 'ufl.conditional.LT'>
condz = <class 'ufl.conditional.LT'>, distribution_parameters = None
@pytest.mark.parametrize('nelem', [2, 4, 8, None])
@pytest.mark.parametrize('fe_fesub', [[("DQ", 0), ("DQ", 0)],
[("Q", 4), ("DQ", 5)]])
@pytest.mark.parametrize('condx', [LT])
@pytest.mark.parametrize('condy', [LT])
@pytest.mark.parametrize('condz', [LT])
@pytest.mark.parametrize('distribution_parameters', [None, {"overlap_type": (DistributedMeshOverlapType.NONE, 0)}])
def test_submesh_interpolate_cell_cell_hex_1_processes(fe_fesub, nelem, condx, condy, condz, distribution_parameters):
if nelem is None:
> mesh = Mesh(join(cwd, "..", "meshes", "cube_hex.msh"), distribution_parameters=distribution_parameters)
tests/firedrake/submesh/test_submesh_interpolate.py:68:
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
petsc4py/PETSc/Log.pyx:188: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
petsc4py/PETSc/Log.pyx:189: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
firedrake/mesh.py:3093: in Mesh
mesh = make_mesh_from_mesh_topology(topology, name)
firedrake/mesh.py:2884: in make_mesh_from_mesh_topology
cell = topology.ufl_cell()
firedrake/mesh.py:731: in ufl_cell
return self._ufl_cell
/usr/lib/python3.12/functools.py:995: in __get__
val = self.func(instance)
firedrake/mesh.py:1227: in _ufl_cell
return constructCellComplex(_cells[tdim][nfacets])
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
name = 'hexahedron'
def constructCellComplex(name):
if name == "vertex":
return Point(0).to_ufl(name)
elif name == "interval":
return Point(1, [Point(0), Point(0)], vertex_num=2).to_ufl(name)
elif name == "triangle":
return n_sided_polygon(3).to_ufl(name)
elif name == "quadrilateral":
# return Cell(name)
return n_sided_polygon(4).to_ufl(name)
elif name == "tetrahedron":
return make_tetrahedron().to_ufl(name)
else:
> raise TypeError("Cell complex construction undefined for {}".format(str(name)))
E TypeError: Cell complex construction undefined for hexahedron
../firedrake_venv/src/redefining_fe/redefining_fe/cells.py:831: TypeError
Check failure on line 203 in tests/firedrake/regression/test_function_spaces.py
github-actions / Firedrake real
test_function_spaces.test_reconstruct_mesh[quad-triangle-primal]
NotImplementedError: Non-Simplex elements are not yet supported
Raw output
meshes = (Mesh(VectorElement(FiniteElement('Q', quadrilateral Complex, 1), dim=2), 116), Mesh(VectorElement(FiniteElement('Lagrange', triangle Complex, 1), dim=2), 117))
dual = False
def test_reconstruct_mesh(meshes, dual):
> V1 = FunctionSpace(meshes[0], "Lagrange", 1)
tests/firedrake/regression/test_function_spaces.py:203:
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
petsc4py/PETSc/Log.pyx:188: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
petsc4py/PETSc/Log.pyx:189: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
firedrake/functionspace.py:105: in FunctionSpace
return impl.WithGeometry.make_function_space(mesh, element, name=name)
firedrake/functionspaceimpl.py:371: in make_function_space
new = FunctionSpace(topology, element, name=name)
petsc4py/PETSc/Log.pyx:188: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
petsc4py/PETSc/Log.pyx:189: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
firedrake/functionspaceimpl.py:520: in __init__
self.set_shared_data()
firedrake/functionspaceimpl.py:529: in set_shared_data
sdata = get_shared_data(self._mesh, element)
petsc4py/PETSc/Log.pyx:188: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
petsc4py/PETSc/Log.pyx:189: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
firedrake/functionspacedata.py:541: in get_shared_data
return FunctionSpaceData(mesh, ufl_element, boundary_set)
petsc4py/PETSc/Log.pyx:188: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
petsc4py/PETSc/Log.pyx:189: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
firedrake/functionspacedata.py:420: in __init__
finat_element = create_element(ufl_element)
petsc4py/PETSc/Log.pyx:188: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
petsc4py/PETSc/Log.pyx:189: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
firedrake/functionspacedata.py:42: in create_element
finat_element = _create_element(ufl_element)
tsfc/finatinterface.py:325: in create_element
finat_element, deps = _create_element(ufl_element,
tsfc/finatinterface.py:355: in _create_element
finat_element, deps = convert(ufl_element, **kwargs)
/usr/lib/python3.12/functools.py:909: in wrapper
return dispatch(args[0].__class__)(*args, **kw)
tsfc/finatinterface.py:153: in convert_finiteelement
cell = as_fiat_cell(element.cell)
tsfc/finatinterface.py:116: in as_fiat_cell
return cell.to_fiat()
../firedrake_venv/src/redefining_fe/redefining_fe/cells.py:802: in to_fiat
return self.cell_complex.to_fiat()
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
self = f151
def to_fiat(self):
if len(self.get_topology()[self.dimension][0]) == self.dimension + 1:
return CellComplexToFiatSimplex(self)
> raise NotImplementedError("Non-Simplex elements are not yet supported")
E NotImplementedError: Non-Simplex elements are not yet supported
../firedrake_venv/src/redefining_fe/redefining_fe/cells.py:617: NotImplementedError
Check failure on line 70 in tests/firedrake/submesh/test_submesh_interpolate.py
github-actions / Firedrake real
test_submesh_interpolate.test_submesh_interpolate_cell_cell_hex_1_processes[distribution_parameters1-LT-LT-LT-fe_fesub0-2]
TypeError: Cell complex construction undefined for hexahedron
Raw output
fe_fesub = [('DQ', 0), ('DQ', 0)], nelem = 2
condx = <class 'ufl.conditional.LT'>, condy = <class 'ufl.conditional.LT'>
condz = <class 'ufl.conditional.LT'>
distribution_parameters = {'overlap_type': (<DistributedMeshOverlapType.NONE: 1>, 0)}
@pytest.mark.parametrize('nelem', [2, 4, 8, None])
@pytest.mark.parametrize('fe_fesub', [[("DQ", 0), ("DQ", 0)],
[("Q", 4), ("DQ", 5)]])
@pytest.mark.parametrize('condx', [LT])
@pytest.mark.parametrize('condy', [LT])
@pytest.mark.parametrize('condz', [LT])
@pytest.mark.parametrize('distribution_parameters', [None, {"overlap_type": (DistributedMeshOverlapType.NONE, 0)}])
def test_submesh_interpolate_cell_cell_hex_1_processes(fe_fesub, nelem, condx, condy, condz, distribution_parameters):
if nelem is None:
mesh = Mesh(join(cwd, "..", "meshes", "cube_hex.msh"), distribution_parameters=distribution_parameters)
else:
> mesh = UnitCubeMesh(nelem, nelem, nelem, hexahedral=True, distribution_parameters=distribution_parameters)
tests/firedrake/submesh/test_submesh_interpolate.py:70:
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
petsc4py/PETSc/Log.pyx:188: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
petsc4py/PETSc/Log.pyx:189: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
firedrake/utility_meshes.py:1780: in UnitCubeMesh
return CubeMesh(
petsc4py/PETSc/Log.pyx:188: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
petsc4py/PETSc/Log.pyx:189: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
firedrake/utility_meshes.py:1723: in CubeMesh
return BoxMesh(
petsc4py/PETSc/Log.pyx:188: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
petsc4py/PETSc/Log.pyx:189: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
firedrake/utility_meshes.py:1653: in BoxMesh
m = mesh.Mesh(
petsc4py/PETSc/Log.pyx:188: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
petsc4py/PETSc/Log.pyx:189: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
firedrake/mesh.py:3093: in Mesh
mesh = make_mesh_from_mesh_topology(topology, name)
firedrake/mesh.py:2884: in make_mesh_from_mesh_topology
cell = topology.ufl_cell()
firedrake/mesh.py:731: in ufl_cell
return self._ufl_cell
/usr/lib/python3.12/functools.py:995: in __get__
val = self.func(instance)
firedrake/mesh.py:1227: in _ufl_cell
return constructCellComplex(_cells[tdim][nfacets])
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
name = 'hexahedron'
def constructCellComplex(name):
if name == "vertex":
return Point(0).to_ufl(name)
elif name == "interval":
return Point(1, [Point(0), Point(0)], vertex_num=2).to_ufl(name)
elif name == "triangle":
return n_sided_polygon(3).to_ufl(name)
elif name == "quadrilateral":
# return Cell(name)
return n_sided_polygon(4).to_ufl(name)
elif name == "tetrahedron":
return make_tetrahedron().to_ufl(name)
else:
> raise TypeError("Cell complex construction undefined for {}".format(str(name)))
E TypeError: Cell complex construction undefined for hexahedron
../firedrake_venv/src/redefining_fe/redefining_fe/cells.py:831: TypeError
Check failure on line 204 in tests/firedrake/regression/test_function_spaces.py
github-actions / Firedrake real
test_function_spaces.test_reconstruct_mesh[triangle3D-quad3D-dual]
NotImplementedError: Non-Simplex elements are not yet supported
Raw output
meshes = (Mesh(VectorElement(FiniteElement('Lagrange', triangle Complex, 1), dim=3), 118), Mesh(VectorElement(FiniteElement('Q', quadrilateral Complex, 1), dim=3), 119))
dual = True
def test_reconstruct_mesh(meshes, dual):
V1 = FunctionSpace(meshes[0], "Lagrange", 1)
> V2 = FunctionSpace(meshes[1], "Lagrange", 1)
tests/firedrake/regression/test_function_spaces.py:204:
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
petsc4py/PETSc/Log.pyx:188: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
petsc4py/PETSc/Log.pyx:189: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
firedrake/functionspace.py:105: in FunctionSpace
return impl.WithGeometry.make_function_space(mesh, element, name=name)
firedrake/functionspaceimpl.py:359: in make_function_space
mesh.init()
firedrake/mesh.py:2282: in init
self._callback(self)
firedrake/mesh.py:2304: in callback
coordinates_fs = functionspace.FunctionSpace(self.topology, self.ufl_coordinate_element())
petsc4py/PETSc/Log.pyx:188: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
petsc4py/PETSc/Log.pyx:189: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
firedrake/functionspace.py:105: in FunctionSpace
return impl.WithGeometry.make_function_space(mesh, element, name=name)
firedrake/functionspaceimpl.py:371: in make_function_space
new = FunctionSpace(topology, element, name=name)
petsc4py/PETSc/Log.pyx:188: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
petsc4py/PETSc/Log.pyx:189: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
firedrake/functionspaceimpl.py:520: in __init__
self.set_shared_data()
firedrake/functionspaceimpl.py:529: in set_shared_data
sdata = get_shared_data(self._mesh, element)
petsc4py/PETSc/Log.pyx:188: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
petsc4py/PETSc/Log.pyx:189: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
firedrake/functionspacedata.py:541: in get_shared_data
return FunctionSpaceData(mesh, ufl_element, boundary_set)
petsc4py/PETSc/Log.pyx:188: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
petsc4py/PETSc/Log.pyx:189: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
firedrake/functionspacedata.py:420: in __init__
finat_element = create_element(ufl_element)
petsc4py/PETSc/Log.pyx:188: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
petsc4py/PETSc/Log.pyx:189: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
firedrake/functionspacedata.py:42: in create_element
finat_element = _create_element(ufl_element)
tsfc/finatinterface.py:325: in create_element
finat_element, deps = _create_element(ufl_element,
tsfc/finatinterface.py:355: in _create_element
finat_element, deps = convert(ufl_element, **kwargs)
/usr/lib/python3.12/functools.py:909: in wrapper
return dispatch(args[0].__class__)(*args, **kw)
tsfc/finatinterface.py:263: in convert_tensorelement
inner_elem, deps = _create_element(element.sub_elements[0], **kwargs)
tsfc/finatinterface.py:355: in _create_element
finat_element, deps = convert(ufl_element, **kwargs)
/usr/lib/python3.12/functools.py:909: in wrapper
return dispatch(args[0].__class__)(*args, **kw)
tsfc/finatinterface.py:153: in convert_finiteelement
cell = as_fiat_cell(element.cell)
tsfc/finatinterface.py:116: in as_fiat_cell
return cell.to_fiat()
../firedrake_venv/src/redefining_fe/redefining_fe/cells.py:802: in to_fiat
return self.cell_complex.to_fiat()
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
self = f174
def to_fiat(self):
if len(self.get_topology()[self.dimension][0]) == self.dimension + 1:
return CellComplexToFiatSimplex(self)
> raise NotImplementedError("Non-Simplex elements are not yet supported")
E NotImplementedError: Non-Simplex elements are not yet supported
../firedrake_venv/src/redefining_fe/redefining_fe/cells.py:617: NotImplementedError
Check failure on line 82 in tests/firedrake/regression/test_zero_forms.py
github-actions / Firedrake real
test_zero_forms.test_math_functions[True-tanh(f) + cos(f) + sin(f)-1-constant-vector]
AttributeError: 'MeshTopology' object has no attribute 'extruded'
Raw output
mesh = Mesh(VectorElement(FiniteElement('Q', quadrilateral Complex, 1), dim=2), 38)
expr = 'tanh(f) + cos(f) + sin(f)', value = 1, typ = 'constant'
fs_type = 'vector'
@pytest.mark.parametrize(['expr', 'value', 'typ', 'fs_type'],
itertools.product(['f',
'2*f',
'tanh(f)',
'2 * tanh(f)',
'f + tanh(f)',
'cos(f) + sin(f)',
'cos(f)*cos(f) + sin(f)*sin(f)',
'tanh(f) + cos(f) + sin(f)',
'1.0/tanh(f) + 1.0/f',
'sqrt(f*f)',
'1.0/tanh(sqrt(f*f)) + 1.0/f + sqrt(f*f)'],
[1, 10, 20, -1, -10, -20],
['function', 'constant'],
['scalar', 'vector', 'tensor']))
def test_math_functions(mesh, expr, value, typ, fs_type):
if typ == 'function':
family, degree = 'CG', 1
elif typ == 'constant':
family, degree = 'Real', 0
if fs_type == "vector":
V = VectorFunctionSpace(mesh, family, degree)
elif fs_type == "tensor":
V = TensorFunctionSpace(mesh, family, degree)
else:
V = FunctionSpace(mesh, family, degree)
f = Function(V)
f.assign(value)
if fs_type == "vector":
f = dot(f, f)
elif fs_type == "tensor":
f = inner(f, f)
> actual = assemble(eval(expr)*dx)
tests/firedrake/regression/test_zero_forms.py:82:
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
petsc4py/PETSc/Log.pyx:188: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
petsc4py/PETSc/Log.pyx:189: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
firedrake/adjoint_utils/assembly.py:30: in wrapper
output = assemble(form, *args, **kwargs)
firedrake/assemble.py:134: in assemble
return get_assembler(expr, *args, **kwargs).assemble(tensor=tensor)
firedrake/assemble.py:983: in assemble
self.execute_parloops(tensor)
firedrake/assemble.py:1004: in execute_parloops
for parloop in self.parloops(tensor):
firedrake/assemble.py:1016: in parloops
for local_kernel, subdomain_id in self.local_kernels:
/usr/lib/python3.12/functools.py:995: in __get__
val = self.func(instance)
firedrake/assemble.py:1054: in local_kernels
kernels = tsfc_interface.compile_form(
petsc4py/PETSc/Log.pyx:188: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
petsc4py/PETSc/Log.pyx:189: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
pyop2/caching.py:522: in wrapper
k = hashkey(*args, **kwargs)
firedrake/tsfc_interface.py:140: in _compile_form_hashkey
args[0].signature(),
../firedrake_venv/src/ufl/ufl/form.py:418: in signature
self._compute_signature()
../firedrake_venv/src/ufl/ufl/form.py:671: in _compute_signature
self._signature = compute_form_signature(self, self._compute_renumbering())
../firedrake_venv/src/ufl/ufl/algorithms/signature.py:137: in compute_form_signature
terminal_hashdata = compute_terminal_hashdata(integrands, renumbering)
../firedrake_venv/src/ufl/ufl/algorithms/signature.py:65: in compute_terminal_hashdata
data = expr._ufl_signature_data_(renumbering)
../firedrake_venv/src/ufl/ufl/coefficient.py:84: in _ufl_signature_data_
fsdata = self._ufl_function_space._ufl_signature_data_(renumbering)
firedrake/functionspaceimpl.py:131: in _ufl_signature_data_
super()._ufl_signature_data_(*args, **kwargs))
../firedrake_venv/src/ufl/ufl/functionspace.py:176: in _ufl_signature_data_
return BaseFunctionSpace._ufl_signature_data_(self, renumbering, "FunctionSpace")
../firedrake_venv/src/ufl/ufl/functionspace.py:138: in _ufl_signature_data_
ddata = domain._ufl_signature_data_(renumbering)
firedrake/mesh.py:2273: in _ufl_signature_data_
return (type(self), self.extruded, self.variable_layers,
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
self = Mesh(VectorElement(FiniteElement('Q', quadrilateral Complex, 1), dim=2), 38)
name = 'extruded'
def __getattr__(self, name):
> val = getattr(self._topology, name)
E AttributeError: 'MeshTopology' object has no attribute 'extruded'
firedrake/mesh.py:2796: AttributeError
Check failure on line 70 in tests/firedrake/submesh/test_submesh_interpolate.py
github-actions / Firedrake real
test_submesh_interpolate.test_submesh_interpolate_cell_cell_hex_1_processes[distribution_parameters1-LT-LT-LT-fe_fesub0-4]
TypeError: Cell complex construction undefined for hexahedron
Raw output
fe_fesub = [('DQ', 0), ('DQ', 0)], nelem = 4
condx = <class 'ufl.conditional.LT'>, condy = <class 'ufl.conditional.LT'>
condz = <class 'ufl.conditional.LT'>
distribution_parameters = {'overlap_type': (<DistributedMeshOverlapType.NONE: 1>, 0)}
@pytest.mark.parametrize('nelem', [2, 4, 8, None])
@pytest.mark.parametrize('fe_fesub', [[("DQ", 0), ("DQ", 0)],
[("Q", 4), ("DQ", 5)]])
@pytest.mark.parametrize('condx', [LT])
@pytest.mark.parametrize('condy', [LT])
@pytest.mark.parametrize('condz', [LT])
@pytest.mark.parametrize('distribution_parameters', [None, {"overlap_type": (DistributedMeshOverlapType.NONE, 0)}])
def test_submesh_interpolate_cell_cell_hex_1_processes(fe_fesub, nelem, condx, condy, condz, distribution_parameters):
if nelem is None:
mesh = Mesh(join(cwd, "..", "meshes", "cube_hex.msh"), distribution_parameters=distribution_parameters)
else:
> mesh = UnitCubeMesh(nelem, nelem, nelem, hexahedral=True, distribution_parameters=distribution_parameters)
tests/firedrake/submesh/test_submesh_interpolate.py:70:
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
petsc4py/PETSc/Log.pyx:188: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
petsc4py/PETSc/Log.pyx:189: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
firedrake/utility_meshes.py:1780: in UnitCubeMesh
return CubeMesh(
petsc4py/PETSc/Log.pyx:188: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
petsc4py/PETSc/Log.pyx:189: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
firedrake/utility_meshes.py:1723: in CubeMesh
return BoxMesh(
petsc4py/PETSc/Log.pyx:188: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
petsc4py/PETSc/Log.pyx:189: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
firedrake/utility_meshes.py:1653: in BoxMesh
m = mesh.Mesh(
petsc4py/PETSc/Log.pyx:188: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
petsc4py/PETSc/Log.pyx:189: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
firedrake/mesh.py:3093: in Mesh
mesh = make_mesh_from_mesh_topology(topology, name)
firedrake/mesh.py:2884: in make_mesh_from_mesh_topology
cell = topology.ufl_cell()
firedrake/mesh.py:731: in ufl_cell
return self._ufl_cell
/usr/lib/python3.12/functools.py:995: in __get__
val = self.func(instance)
firedrake/mesh.py:1227: in _ufl_cell
return constructCellComplex(_cells[tdim][nfacets])
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
name = 'hexahedron'
def constructCellComplex(name):
if name == "vertex":
return Point(0).to_ufl(name)
elif name == "interval":
return Point(1, [Point(0), Point(0)], vertex_num=2).to_ufl(name)
elif name == "triangle":
return n_sided_polygon(3).to_ufl(name)
elif name == "quadrilateral":
# return Cell(name)
return n_sided_polygon(4).to_ufl(name)
elif name == "tetrahedron":
return make_tetrahedron().to_ufl(name)
else:
> raise TypeError("Cell complex construction undefined for {}".format(str(name)))
E TypeError: Cell complex construction undefined for hexahedron
../firedrake_venv/src/redefining_fe/redefining_fe/cells.py:831: TypeError
Check failure on line 82 in tests/firedrake/regression/test_zero_forms.py
github-actions / Firedrake real
test_zero_forms.test_math_functions[True-tanh(f) + cos(f) + sin(f)-1-constant-tensor]
AttributeError: 'MeshTopology' object has no attribute 'extruded'
Raw output
mesh = Mesh(VectorElement(FiniteElement('Q', quadrilateral Complex, 1), dim=2), 38)
expr = 'tanh(f) + cos(f) + sin(f)', value = 1, typ = 'constant'
fs_type = 'tensor'
@pytest.mark.parametrize(['expr', 'value', 'typ', 'fs_type'],
itertools.product(['f',
'2*f',
'tanh(f)',
'2 * tanh(f)',
'f + tanh(f)',
'cos(f) + sin(f)',
'cos(f)*cos(f) + sin(f)*sin(f)',
'tanh(f) + cos(f) + sin(f)',
'1.0/tanh(f) + 1.0/f',
'sqrt(f*f)',
'1.0/tanh(sqrt(f*f)) + 1.0/f + sqrt(f*f)'],
[1, 10, 20, -1, -10, -20],
['function', 'constant'],
['scalar', 'vector', 'tensor']))
def test_math_functions(mesh, expr, value, typ, fs_type):
if typ == 'function':
family, degree = 'CG', 1
elif typ == 'constant':
family, degree = 'Real', 0
if fs_type == "vector":
V = VectorFunctionSpace(mesh, family, degree)
elif fs_type == "tensor":
V = TensorFunctionSpace(mesh, family, degree)
else:
V = FunctionSpace(mesh, family, degree)
f = Function(V)
f.assign(value)
if fs_type == "vector":
f = dot(f, f)
elif fs_type == "tensor":
f = inner(f, f)
> actual = assemble(eval(expr)*dx)
tests/firedrake/regression/test_zero_forms.py:82:
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
petsc4py/PETSc/Log.pyx:188: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
petsc4py/PETSc/Log.pyx:189: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
firedrake/adjoint_utils/assembly.py:30: in wrapper
output = assemble(form, *args, **kwargs)
firedrake/assemble.py:134: in assemble
return get_assembler(expr, *args, **kwargs).assemble(tensor=tensor)
firedrake/assemble.py:983: in assemble
self.execute_parloops(tensor)
firedrake/assemble.py:1004: in execute_parloops
for parloop in self.parloops(tensor):
firedrake/assemble.py:1016: in parloops
for local_kernel, subdomain_id in self.local_kernels:
/usr/lib/python3.12/functools.py:995: in __get__
val = self.func(instance)
firedrake/assemble.py:1054: in local_kernels
kernels = tsfc_interface.compile_form(
petsc4py/PETSc/Log.pyx:188: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
petsc4py/PETSc/Log.pyx:189: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
pyop2/caching.py:522: in wrapper
k = hashkey(*args, **kwargs)
firedrake/tsfc_interface.py:140: in _compile_form_hashkey
args[0].signature(),
../firedrake_venv/src/ufl/ufl/form.py:418: in signature
self._compute_signature()
../firedrake_venv/src/ufl/ufl/form.py:671: in _compute_signature
self._signature = compute_form_signature(self, self._compute_renumbering())
../firedrake_venv/src/ufl/ufl/algorithms/signature.py:137: in compute_form_signature
terminal_hashdata = compute_terminal_hashdata(integrands, renumbering)
../firedrake_venv/src/ufl/ufl/algorithms/signature.py:65: in compute_terminal_hashdata
data = expr._ufl_signature_data_(renumbering)
../firedrake_venv/src/ufl/ufl/coefficient.py:84: in _ufl_signature_data_
fsdata = self._ufl_function_space._ufl_signature_data_(renumbering)
firedrake/functionspaceimpl.py:131: in _ufl_signature_data_
super()._ufl_signature_data_(*args, **kwargs))
../firedrake_venv/src/ufl/ufl/functionspace.py:176: in _ufl_signature_data_
return BaseFunctionSpace._ufl_signature_data_(self, renumbering, "FunctionSpace")
../firedrake_venv/src/ufl/ufl/functionspace.py:138: in _ufl_signature_data_
ddata = domain._ufl_signature_data_(renumbering)
firedrake/mesh.py:2273: in _ufl_signature_data_
return (type(self), self.extruded, self.variable_layers,
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
self = Mesh(VectorElement(FiniteElement('Q', quadrilateral Complex, 1), dim=2), 38)
name = 'extruded'
def __getattr__(self, name):
> val = getattr(self._topology, name)
E AttributeError: 'MeshTopology' object has no attribute 'extruded'
firedrake/mesh.py:2796: AttributeError
Check failure on line 204 in tests/firedrake/regression/test_function_spaces.py
github-actions / Firedrake real
test_function_spaces.test_reconstruct_mesh[triangle3D-quad3D-primal]
NotImplementedError: Non-Simplex elements are not yet supported
Raw output
meshes = (Mesh(VectorElement(FiniteElement('Lagrange', triangle Complex, 1), dim=3), 118), Mesh(VectorElement(FiniteElement('Q', quadrilateral Complex, 1), dim=3), 119))
dual = False
def test_reconstruct_mesh(meshes, dual):
V1 = FunctionSpace(meshes[0], "Lagrange", 1)
> V2 = FunctionSpace(meshes[1], "Lagrange", 1)
tests/firedrake/regression/test_function_spaces.py:204:
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
petsc4py/PETSc/Log.pyx:188: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
petsc4py/PETSc/Log.pyx:189: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
firedrake/functionspace.py:105: in FunctionSpace
return impl.WithGeometry.make_function_space(mesh, element, name=name)
firedrake/functionspaceimpl.py:371: in make_function_space
new = FunctionSpace(topology, element, name=name)
petsc4py/PETSc/Log.pyx:188: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
petsc4py/PETSc/Log.pyx:189: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
firedrake/functionspaceimpl.py:520: in __init__
self.set_shared_data()
firedrake/functionspaceimpl.py:529: in set_shared_data
sdata = get_shared_data(self._mesh, element)
petsc4py/PETSc/Log.pyx:188: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
petsc4py/PETSc/Log.pyx:189: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
firedrake/functionspacedata.py:541: in get_shared_data
return FunctionSpaceData(mesh, ufl_element, boundary_set)
petsc4py/PETSc/Log.pyx:188: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
petsc4py/PETSc/Log.pyx:189: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
firedrake/functionspacedata.py:420: in __init__
finat_element = create_element(ufl_element)
petsc4py/PETSc/Log.pyx:188: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
petsc4py/PETSc/Log.pyx:189: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
firedrake/functionspacedata.py:42: in create_element
finat_element = _create_element(ufl_element)
tsfc/finatinterface.py:325: in create_element
finat_element, deps = _create_element(ufl_element,
tsfc/finatinterface.py:355: in _create_element
finat_element, deps = convert(ufl_element, **kwargs)
/usr/lib/python3.12/functools.py:909: in wrapper
return dispatch(args[0].__class__)(*args, **kw)
tsfc/finatinterface.py:153: in convert_finiteelement
cell = as_fiat_cell(element.cell)
tsfc/finatinterface.py:116: in as_fiat_cell
return cell.to_fiat()
../firedrake_venv/src/redefining_fe/redefining_fe/cells.py:802: in to_fiat
return self.cell_complex.to_fiat()
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
self = f174
def to_fiat(self):
if len(self.get_topology()[self.dimension][0]) == self.dimension + 1:
return CellComplexToFiatSimplex(self)
> raise NotImplementedError("Non-Simplex elements are not yet supported")
E NotImplementedError: Non-Simplex elements are not yet supported
../firedrake_venv/src/redefining_fe/redefining_fe/cells.py:617: NotImplementedError
Check failure on line 70 in tests/firedrake/submesh/test_submesh_interpolate.py
github-actions / Firedrake real
test_submesh_interpolate.test_submesh_interpolate_cell_cell_hex_1_processes[distribution_parameters1-LT-LT-LT-fe_fesub0-8]
TypeError: Cell complex construction undefined for hexahedron
Raw output
fe_fesub = [('DQ', 0), ('DQ', 0)], nelem = 8
condx = <class 'ufl.conditional.LT'>, condy = <class 'ufl.conditional.LT'>
condz = <class 'ufl.conditional.LT'>
distribution_parameters = {'overlap_type': (<DistributedMeshOverlapType.NONE: 1>, 0)}
@pytest.mark.parametrize('nelem', [2, 4, 8, None])
@pytest.mark.parametrize('fe_fesub', [[("DQ", 0), ("DQ", 0)],
[("Q", 4), ("DQ", 5)]])
@pytest.mark.parametrize('condx', [LT])
@pytest.mark.parametrize('condy', [LT])
@pytest.mark.parametrize('condz', [LT])
@pytest.mark.parametrize('distribution_parameters', [None, {"overlap_type": (DistributedMeshOverlapType.NONE, 0)}])
def test_submesh_interpolate_cell_cell_hex_1_processes(fe_fesub, nelem, condx, condy, condz, distribution_parameters):
if nelem is None:
mesh = Mesh(join(cwd, "..", "meshes", "cube_hex.msh"), distribution_parameters=distribution_parameters)
else:
> mesh = UnitCubeMesh(nelem, nelem, nelem, hexahedral=True, distribution_parameters=distribution_parameters)
tests/firedrake/submesh/test_submesh_interpolate.py:70:
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
petsc4py/PETSc/Log.pyx:188: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
petsc4py/PETSc/Log.pyx:189: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
firedrake/utility_meshes.py:1780: in UnitCubeMesh
return CubeMesh(
petsc4py/PETSc/Log.pyx:188: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
petsc4py/PETSc/Log.pyx:189: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
firedrake/utility_meshes.py:1723: in CubeMesh
return BoxMesh(
petsc4py/PETSc/Log.pyx:188: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
petsc4py/PETSc/Log.pyx:189: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
firedrake/utility_meshes.py:1653: in BoxMesh
m = mesh.Mesh(
petsc4py/PETSc/Log.pyx:188: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
petsc4py/PETSc/Log.pyx:189: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
firedrake/mesh.py:3093: in Mesh
mesh = make_mesh_from_mesh_topology(topology, name)
firedrake/mesh.py:2884: in make_mesh_from_mesh_topology
cell = topology.ufl_cell()
firedrake/mesh.py:731: in ufl_cell
return self._ufl_cell
/usr/lib/python3.12/functools.py:995: in __get__
val = self.func(instance)
firedrake/mesh.py:1227: in _ufl_cell
return constructCellComplex(_cells[tdim][nfacets])
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
name = 'hexahedron'
def constructCellComplex(name):
if name == "vertex":
return Point(0).to_ufl(name)
elif name == "interval":
return Point(1, [Point(0), Point(0)], vertex_num=2).to_ufl(name)
elif name == "triangle":
return n_sided_polygon(3).to_ufl(name)
elif name == "quadrilateral":
# return Cell(name)
return n_sided_polygon(4).to_ufl(name)
elif name == "tetrahedron":
return make_tetrahedron().to_ufl(name)
else:
> raise TypeError("Cell complex construction undefined for {}".format(str(name)))
E TypeError: Cell complex construction undefined for hexahedron
../firedrake_venv/src/redefining_fe/redefining_fe/cells.py:831: TypeError
Check failure on line 74 in tests/firedrake/regression/test_zero_forms.py
github-actions / Firedrake real
test_zero_forms.test_math_functions[True-tanh(f) + cos(f) + sin(f)-10-function-scalar]
NotImplementedError: Non-Simplex elements are not yet supported
Raw output
mesh = Mesh(VectorElement(FiniteElement('Q', quadrilateral Complex, 1), dim=2), 38)
expr = 'tanh(f) + cos(f) + sin(f)', value = 10, typ = 'function'
fs_type = 'scalar'
@pytest.mark.parametrize(['expr', 'value', 'typ', 'fs_type'],
itertools.product(['f',
'2*f',
'tanh(f)',
'2 * tanh(f)',
'f + tanh(f)',
'cos(f) + sin(f)',
'cos(f)*cos(f) + sin(f)*sin(f)',
'tanh(f) + cos(f) + sin(f)',
'1.0/tanh(f) + 1.0/f',
'sqrt(f*f)',
'1.0/tanh(sqrt(f*f)) + 1.0/f + sqrt(f*f)'],
[1, 10, 20, -1, -10, -20],
['function', 'constant'],
['scalar', 'vector', 'tensor']))
def test_math_functions(mesh, expr, value, typ, fs_type):
if typ == 'function':
family, degree = 'CG', 1
elif typ == 'constant':
family, degree = 'Real', 0
if fs_type == "vector":
V = VectorFunctionSpace(mesh, family, degree)
elif fs_type == "tensor":
V = TensorFunctionSpace(mesh, family, degree)
else:
> V = FunctionSpace(mesh, family, degree)
tests/firedrake/regression/test_zero_forms.py:74:
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
petsc4py/PETSc/Log.pyx:188: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
petsc4py/PETSc/Log.pyx:189: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
firedrake/functionspace.py:105: in FunctionSpace
return impl.WithGeometry.make_function_space(mesh, element, name=name)
firedrake/functionspaceimpl.py:371: in make_function_space
new = FunctionSpace(topology, element, name=name)
petsc4py/PETSc/Log.pyx:188: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
petsc4py/PETSc/Log.pyx:189: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
firedrake/functionspaceimpl.py:520: in __init__
self.set_shared_data()
firedrake/functionspaceimpl.py:529: in set_shared_data
sdata = get_shared_data(self._mesh, element)
petsc4py/PETSc/Log.pyx:188: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
petsc4py/PETSc/Log.pyx:189: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
firedrake/functionspacedata.py:541: in get_shared_data
return FunctionSpaceData(mesh, ufl_element, boundary_set)
petsc4py/PETSc/Log.pyx:188: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
petsc4py/PETSc/Log.pyx:189: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
firedrake/functionspacedata.py:420: in __init__
finat_element = create_element(ufl_element)
petsc4py/PETSc/Log.pyx:188: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
petsc4py/PETSc/Log.pyx:189: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
firedrake/functionspacedata.py:42: in create_element
finat_element = _create_element(ufl_element)
tsfc/finatinterface.py:325: in create_element
finat_element, deps = _create_element(ufl_element,
tsfc/finatinterface.py:355: in _create_element
finat_element, deps = convert(ufl_element, **kwargs)
/usr/lib/python3.12/functools.py:909: in wrapper
return dispatch(args[0].__class__)(*args, **kw)
tsfc/finatinterface.py:153: in convert_finiteelement
cell = as_fiat_cell(element.cell)
tsfc/finatinterface.py:116: in as_fiat_cell
return cell.to_fiat()
../firedrake_venv/src/redefining_fe/redefining_fe/cells.py:802: in to_fiat
return self.cell_complex.to_fiat()
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
self = f15
def to_fiat(self):
if len(self.get_topology()[self.dimension][0]) == self.dimension + 1:
return CellComplexToFiatSimplex(self)
> raise NotImplementedError("Non-Simplex elements are not yet supported")
E NotImplementedError: Non-Simplex elements are not yet supported
../firedrake_venv/src/redefining_fe/redefining_fe/cells.py:617: NotImplementedError
Check failure on line 70 in tests/firedrake/regression/test_zero_forms.py
github-actions / Firedrake real
test_zero_forms.test_math_functions[True-tanh(f) + cos(f) + sin(f)-10-function-vector]
NotImplementedError: Non-Simplex elements are not yet supported
Raw output
mesh = Mesh(VectorElement(FiniteElement('Q', quadrilateral Complex, 1), dim=2), 38)
expr = 'tanh(f) + cos(f) + sin(f)', value = 10, typ = 'function'
fs_type = 'vector'
@pytest.mark.parametrize(['expr', 'value', 'typ', 'fs_type'],
itertools.product(['f',
'2*f',
'tanh(f)',
'2 * tanh(f)',
'f + tanh(f)',
'cos(f) + sin(f)',
'cos(f)*cos(f) + sin(f)*sin(f)',
'tanh(f) + cos(f) + sin(f)',
'1.0/tanh(f) + 1.0/f',
'sqrt(f*f)',
'1.0/tanh(sqrt(f*f)) + 1.0/f + sqrt(f*f)'],
[1, 10, 20, -1, -10, -20],
['function', 'constant'],
['scalar', 'vector', 'tensor']))
def test_math_functions(mesh, expr, value, typ, fs_type):
if typ == 'function':
family, degree = 'CG', 1
elif typ == 'constant':
family, degree = 'Real', 0
if fs_type == "vector":
> V = VectorFunctionSpace(mesh, family, degree)
tests/firedrake/regression/test_zero_forms.py:70:
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
petsc4py/PETSc/Log.pyx:188: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
petsc4py/PETSc/Log.pyx:189: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
firedrake/functionspace.py:191: in VectorFunctionSpace
return FunctionSpace(mesh, element, name=name)
petsc4py/PETSc/Log.pyx:188: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
petsc4py/PETSc/Log.pyx:189: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
firedrake/functionspace.py:105: in FunctionSpace
return impl.WithGeometry.make_function_space(mesh, element, name=name)
firedrake/functionspaceimpl.py:371: in make_function_space
new = FunctionSpace(topology, element, name=name)
petsc4py/PETSc/Log.pyx:188: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
petsc4py/PETSc/Log.pyx:189: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
firedrake/functionspaceimpl.py:520: in __init__
self.set_shared_data()
firedrake/functionspaceimpl.py:529: in set_shared_data
sdata = get_shared_data(self._mesh, element)
petsc4py/PETSc/Log.pyx:188: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
petsc4py/PETSc/Log.pyx:189: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
firedrake/functionspacedata.py:541: in get_shared_data
return FunctionSpaceData(mesh, ufl_element, boundary_set)
petsc4py/PETSc/Log.pyx:188: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
petsc4py/PETSc/Log.pyx:189: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
firedrake/functionspacedata.py:420: in __init__
finat_element = create_element(ufl_element)
petsc4py/PETSc/Log.pyx:188: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
petsc4py/PETSc/Log.pyx:189: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
firedrake/functionspacedata.py:42: in create_element
finat_element = _create_element(ufl_element)
tsfc/finatinterface.py:325: in create_element
finat_element, deps = _create_element(ufl_element,
tsfc/finatinterface.py:355: in _create_element
finat_element, deps = convert(ufl_element, **kwargs)
/usr/lib/python3.12/functools.py:909: in wrapper
return dispatch(args[0].__class__)(*args, **kw)
tsfc/finatinterface.py:263: in convert_tensorelement
inner_elem, deps = _create_element(element.sub_elements[0], **kwargs)
tsfc/finatinterface.py:355: in _create_element
finat_element, deps = convert(ufl_element, **kwargs)
/usr/lib/python3.12/functools.py:909: in wrapper
return dispatch(args[0].__class__)(*args, **kw)
tsfc/finatinterface.py:153: in convert_finiteelement
cell = as_fiat_cell(element.cell)
tsfc/finatinterface.py:116: in as_fiat_cell
return cell.to_fiat()
../firedrake_venv/src/redefining_fe/redefining_fe/cells.py:802: in to_fiat
return self.cell_complex.to_fiat()
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
self = f15
def to_fiat(self):
if len(self.get_topology()[self.dimension][0]) == self.dimension + 1:
return CellComplexToFiatSimplex(self)
> raise NotImplementedError("Non-Simplex elements are not yet supported")
E NotImplementedError: Non-Simplex elements are not yet supported
../firedrake_venv/src/redefining_fe/redefining_fe/cells.py:617: NotImplementedError
Check failure on line 68 in tests/firedrake/submesh/test_submesh_interpolate.py
github-actions / Firedrake real
test_submesh_interpolate.test_submesh_interpolate_cell_cell_hex_1_processes[distribution_parameters1-LT-LT-LT-fe_fesub0-None]
TypeError: Cell complex construction undefined for hexahedron
Raw output
fe_fesub = [('DQ', 0), ('DQ', 0)], nelem = None
condx = <class 'ufl.conditional.LT'>, condy = <class 'ufl.conditional.LT'>
condz = <class 'ufl.conditional.LT'>
distribution_parameters = {'overlap_type': (<DistributedMeshOverlapType.NONE: 1>, 0)}
@pytest.mark.parametrize('nelem', [2, 4, 8, None])
@pytest.mark.parametrize('fe_fesub', [[("DQ", 0), ("DQ", 0)],
[("Q", 4), ("DQ", 5)]])
@pytest.mark.parametrize('condx', [LT])
@pytest.mark.parametrize('condy', [LT])
@pytest.mark.parametrize('condz', [LT])
@pytest.mark.parametrize('distribution_parameters', [None, {"overlap_type": (DistributedMeshOverlapType.NONE, 0)}])
def test_submesh_interpolate_cell_cell_hex_1_processes(fe_fesub, nelem, condx, condy, condz, distribution_parameters):
if nelem is None:
> mesh = Mesh(join(cwd, "..", "meshes", "cube_hex.msh"), distribution_parameters=distribution_parameters)
tests/firedrake/submesh/test_submesh_interpolate.py:68:
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
petsc4py/PETSc/Log.pyx:188: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
petsc4py/PETSc/Log.pyx:189: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
firedrake/mesh.py:3093: in Mesh
mesh = make_mesh_from_mesh_topology(topology, name)
firedrake/mesh.py:2884: in make_mesh_from_mesh_topology
cell = topology.ufl_cell()
firedrake/mesh.py:731: in ufl_cell
return self._ufl_cell
/usr/lib/python3.12/functools.py:995: in __get__
val = self.func(instance)
firedrake/mesh.py:1227: in _ufl_cell
return constructCellComplex(_cells[tdim][nfacets])
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
name = 'hexahedron'
def constructCellComplex(name):
if name == "vertex":
return Point(0).to_ufl(name)
elif name == "interval":
return Point(1, [Point(0), Point(0)], vertex_num=2).to_ufl(name)
elif name == "triangle":
return n_sided_polygon(3).to_ufl(name)
elif name == "quadrilateral":
# return Cell(name)
return n_sided_polygon(4).to_ufl(name)
elif name == "tetrahedron":
return make_tetrahedron().to_ufl(name)
else:
> raise TypeError("Cell complex construction undefined for {}".format(str(name)))
E TypeError: Cell complex construction undefined for hexahedron
../firedrake_venv/src/redefining_fe/redefining_fe/cells.py:831: TypeError
Check failure on line 197 in tests/firedrake/regression/test_function_spaces.py
github-actions / Firedrake real
test_function_spaces.test_reconstruct_mesh[hex-prism-dual]
failed on setup with "TypeError: Cell complex construction undefined for hexahedron"
Raw output
request = <SubRequest 'meshes' for <Function test_reconstruct_mesh[hex-prism-dual]>>
@pytest.fixture(scope="module", params=[
"line-line", "line-triangle", "quad-triangle", "triangle3D-quad3D", "hex-prism"])
def meshes(request):
if request.param == "line-line":
return UnitIntervalMesh(1), UnitIntervalMesh(2)
elif request.param == "line-triangle":
return UnitIntervalMesh(2), UnitSquareMesh(1, 1)
elif request.param == "quad-triangle":
return UnitSquareMesh(3, 3, quadrilateral=True), UnitSquareMesh(2, 2)
elif request.param == "triangle3D-quad3D":
return UnitIcosahedralSphereMesh(2), UnitCubedSphereMesh(2)
elif request.param == "hex-prism":
> return UnitCubeMesh(2, 2, 2, hexahedral=True), ExtrudedMesh(UnitSquareMesh(2, 2), 2)
tests/firedrake/regression/test_function_spaces.py:197:
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
petsc4py/PETSc/Log.pyx:188: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
petsc4py/PETSc/Log.pyx:189: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
firedrake/utility_meshes.py:1780: in UnitCubeMesh
return CubeMesh(
petsc4py/PETSc/Log.pyx:188: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
petsc4py/PETSc/Log.pyx:189: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
firedrake/utility_meshes.py:1723: in CubeMesh
return BoxMesh(
petsc4py/PETSc/Log.pyx:188: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
petsc4py/PETSc/Log.pyx:189: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
firedrake/utility_meshes.py:1653: in BoxMesh
m = mesh.Mesh(
petsc4py/PETSc/Log.pyx:188: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
petsc4py/PETSc/Log.pyx:189: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
firedrake/mesh.py:3093: in Mesh
mesh = make_mesh_from_mesh_topology(topology, name)
firedrake/mesh.py:2884: in make_mesh_from_mesh_topology
cell = topology.ufl_cell()
firedrake/mesh.py:731: in ufl_cell
return self._ufl_cell
/usr/lib/python3.12/functools.py:995: in __get__
val = self.func(instance)
firedrake/mesh.py:1227: in _ufl_cell
return constructCellComplex(_cells[tdim][nfacets])
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
name = 'hexahedron'
def constructCellComplex(name):
if name == "vertex":
return Point(0).to_ufl(name)
elif name == "interval":
return Point(1, [Point(0), Point(0)], vertex_num=2).to_ufl(name)
elif name == "triangle":
return n_sided_polygon(3).to_ufl(name)
elif name == "quadrilateral":
# return Cell(name)
return n_sided_polygon(4).to_ufl(name)
elif name == "tetrahedron":
return make_tetrahedron().to_ufl(name)
else:
> raise TypeError("Cell complex construction undefined for {}".format(str(name)))
E TypeError: Cell complex construction undefined for hexahedron
../firedrake_venv/src/redefining_fe/redefining_fe/cells.py:831: TypeError
Check failure on line 72 in tests/firedrake/regression/test_zero_forms.py
github-actions / Firedrake real
test_zero_forms.test_math_functions[True-tanh(f) + cos(f) + sin(f)-10-function-tensor]
NotImplementedError: Non-Simplex elements are not yet supported
Raw output
mesh = Mesh(VectorElement(FiniteElement('Q', quadrilateral Complex, 1), dim=2), 38)
expr = 'tanh(f) + cos(f) + sin(f)', value = 10, typ = 'function'
fs_type = 'tensor'
@pytest.mark.parametrize(['expr', 'value', 'typ', 'fs_type'],
itertools.product(['f',
'2*f',
'tanh(f)',
'2 * tanh(f)',
'f + tanh(f)',
'cos(f) + sin(f)',
'cos(f)*cos(f) + sin(f)*sin(f)',
'tanh(f) + cos(f) + sin(f)',
'1.0/tanh(f) + 1.0/f',
'sqrt(f*f)',
'1.0/tanh(sqrt(f*f)) + 1.0/f + sqrt(f*f)'],
[1, 10, 20, -1, -10, -20],
['function', 'constant'],
['scalar', 'vector', 'tensor']))
def test_math_functions(mesh, expr, value, typ, fs_type):
if typ == 'function':
family, degree = 'CG', 1
elif typ == 'constant':
family, degree = 'Real', 0
if fs_type == "vector":
V = VectorFunctionSpace(mesh, family, degree)
elif fs_type == "tensor":
> V = TensorFunctionSpace(mesh, family, degree)
tests/firedrake/regression/test_zero_forms.py:72:
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
petsc4py/PETSc/Log.pyx:188: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
petsc4py/PETSc/Log.pyx:189: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
firedrake/functionspace.py:242: in TensorFunctionSpace
return FunctionSpace(mesh, element, name=name)
petsc4py/PETSc/Log.pyx:188: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
petsc4py/PETSc/Log.pyx:189: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
firedrake/functionspace.py:105: in FunctionSpace
return impl.WithGeometry.make_function_space(mesh, element, name=name)
firedrake/functionspaceimpl.py:371: in make_function_space
new = FunctionSpace(topology, element, name=name)
petsc4py/PETSc/Log.pyx:188: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
petsc4py/PETSc/Log.pyx:189: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
firedrake/functionspaceimpl.py:520: in __init__
self.set_shared_data()
firedrake/functionspaceimpl.py:529: in set_shared_data
sdata = get_shared_data(self._mesh, element)
petsc4py/PETSc/Log.pyx:188: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
petsc4py/PETSc/Log.pyx:189: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
firedrake/functionspacedata.py:541: in get_shared_data
return FunctionSpaceData(mesh, ufl_element, boundary_set)
petsc4py/PETSc/Log.pyx:188: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
petsc4py/PETSc/Log.pyx:189: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
firedrake/functionspacedata.py:420: in __init__
finat_element = create_element(ufl_element)
petsc4py/PETSc/Log.pyx:188: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
petsc4py/PETSc/Log.pyx:189: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
???
firedrake/functionspacedata.py:42: in create_element
finat_element = _create_element(ufl_element)
tsfc/finatinterface.py:325: in create_element
finat_element, deps = _create_element(ufl_element,
tsfc/finatinterface.py:355: in _create_element
finat_element, deps = convert(ufl_element, **kwargs)
/usr/lib/python3.12/functools.py:909: in wrapper
return dispatch(args[0].__class__)(*args, **kw)
tsfc/finatinterface.py:263: in convert_tensorelement
inner_elem, deps = _create_element(element.sub_elements[0], **kwargs)
tsfc/finatinterface.py:355: in _create_element
finat_element, deps = convert(ufl_element, **kwargs)
/usr/lib/python3.12/functools.py:909: in wrapper
return dispatch(args[0].__class__)(*args, **kw)
tsfc/finatinterface.py:153: in convert_finiteelement
cell = as_fiat_cell(element.cell)
tsfc/finatinterface.py:116: in as_fiat_cell
return cell.to_fiat()
../firedrake_venv/src/redefining_fe/redefining_fe/cells.py:802: in to_fiat
return self.cell_complex.to_fiat()
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
self = f15
def to_fiat(self):
if len(self.get_topology()[self.dimension][0]) == self.dimension + 1:
return CellComplexToFiatSimplex(self)
> raise NotImplementedError("Non-Simplex elements are not yet supported")
E NotImplementedError: Non-Simplex elements are not yet supported
../firedrake_venv/src/redefining_fe/redefining_fe/cells.py:617: NotImplementedError