From 93ac2287818066b2f6bfab959d4285fc53558e55 Mon Sep 17 00:00:00 2001 From: Robert Oostenveld Date: Fri, 1 Mar 2024 21:23:18 +0100 Subject: [PATCH] updated tags --- _data/tag/aarhus.yml | 6 ++-- _data/tag/animal.yml | 6 ++-- _data/tag/bids.yml | 6 ++-- _data/tag/coherence.yml | 6 ++-- _data/tag/compile.yml | 6 ++-- _data/tag/connectivity.yml | 10 +++--- _data/tag/cuttingeeg2021.yml | 6 ++-- _data/tag/dataformat.yml | 12 +++---- _data/tag/dataset.yml | 6 ++-- _data/tag/development.yml | 6 ++-- _data/tag/dipole.yml | 6 ++-- _data/tag/dtf.yml | 6 ++-- _data/tag/eeg-audodd.yml | 6 ++-- _data/tag/eeg-sedation.yml | 6 ++-- _data/tag/eeg.yml | 18 +++++----- _data/tag/example.yml | 30 ++++++++--------- _data/tag/faq.yml | 58 ++++++++++++++++----------------- _data/tag/fitng2023.yml | 6 ++-- _data/tag/freq.yml | 6 ++-- _data/tag/granger.yml | 6 ++-- _data/tag/guidelines.yml | 6 ++-- _data/tag/lfp.yml | 6 ++-- _data/tag/madrid2019.yml | 6 ++-- _data/tag/meeting.yml | 6 ++-- _data/tag/meg-audodd.yml | 10 +++--- _data/tag/meg-uk-2015.yml | 6 ++-- _data/tag/meg.yml | 22 ++++++------- _data/tag/mex.yml | 6 ++-- _data/tag/mmfaces.yml | 6 ++-- _data/tag/natmeg2014.yml | 6 ++-- _data/tag/neuralynx.yml | 6 ++-- _data/tag/ohbm2018.yml | 6 ++-- _data/tag/oslo2019.yml | 6 ++-- _data/tag/paris2019.yml | 6 ++-- _data/tag/pdc.yml | 6 ++-- _data/tag/practicalmeeg2022.yml | 6 ++-- _data/tag/preprocessing.yml | 6 ++-- _data/tag/realtime.yml | 18 +++++----- _data/tag/reproducescript.yml | 6 ++-- _data/tag/script.yml | 6 ++-- _data/tag/sharing.yml | 6 ++-- _data/tag/source.yml | 12 +++---- _data/tag/spike-attention.yml | 6 ++-- _data/tag/spike.yml | 12 +++---- _data/tag/template.yml | 6 ++-- _data/tag/toolkit2020.yml | 6 ++-- _data/tag/toolkit2021.yml | 6 ++-- _data/tag/toolkit2022.yml | 6 ++-- _data/tag/toolkit2023.yml | 6 ++-- _data/tag/toolkit2024.yml | 6 ++-- _data/tag/trialdef.yml | 6 ++-- _data/tag/trialfun.yml | 6 ++-- _data/tag/trialinfo.yml | 6 ++-- _data/tag/tutorial.yml | 28 ++++++++-------- 54 files changed, 244 insertions(+), 244 deletions(-) diff --git a/_data/tag/aarhus.yml b/_data/tag/aarhus.yml index 0af4d97b0..f2a2cfdee 100644 --- a/_data/tag/aarhus.yml +++ b/_data/tag/aarhus.yml @@ -1,6 +1,6 @@ -- name: FieldTrip workshop in Aarhus - link: /workshop/aarhus2015 - - name: Beamforming evoked fields and potentials in combined MEG/EEG data link: /workshop/aarhus/beamformingerf +- name: FieldTrip workshop in Aarhus + link: /workshop/aarhus2015 + diff --git a/_data/tag/animal.yml b/_data/tag/animal.yml index a8c11b428..f591c5a14 100644 --- a/_data/tag/animal.yml +++ b/_data/tag/animal.yml @@ -1,9 +1,9 @@ - name: Analysis of monkey ECoG recordings link: /tutorial/monkey_ecog -- name: Preprocessing and analysis of spike and local field potential data - link: /tutorial/spikefield - - name: Preprocessing and analysis of spike-train data link: /tutorial/spike +- name: Preprocessing and analysis of spike and local field potential data + link: /tutorial/spikefield + diff --git a/_data/tag/bids.yml b/_data/tag/bids.yml index 09f29288b..70fd539e0 100644 --- a/_data/tag/bids.yml +++ b/_data/tag/bids.yml @@ -1,3 +1,6 @@ +- name: BIDS - the brain imaging data structure + link: /example/bids + - name: Converting an example audio dataset for sharing in BIDS link: /example/bids_audio @@ -13,9 +16,6 @@ - name: Converting an example eyetracker dataset for sharing in BIDS link: /example/bids_eyetracker -- name: BIDS - the brain imaging data structure - link: /example/bids - - name: Converting an example MEG dataset for sharing in BIDS link: /example/bids_meg diff --git a/_data/tag/coherence.yml b/_data/tag/coherence.yml index 2fa67f6eb..7be3a001d 100644 --- a/_data/tag/coherence.yml +++ b/_data/tag/coherence.yml @@ -25,12 +25,12 @@ - name: Analysis of corticomuscular coherence link: /tutorial/coherence -- name: Extended analysis of sensor- and source-level connectivity - link: /tutorial/connectivityextended - - name: Analysis of sensor- and source-level connectivity link: /tutorial/connectivity +- name: Extended analysis of sensor- and source-level connectivity + link: /tutorial/connectivityextended + - name: Fourier analysis of neuronal oscillations and synchronization link: /tutorial/fourier diff --git a/_data/tag/compile.yml b/_data/tag/compile.yml index 55a0b1c08..43590ece4 100644 --- a/_data/tag/compile.yml +++ b/_data/tag/compile.yml @@ -1,6 +1,6 @@ -- name: Can I use FieldTrip without MATLAB license? - link: /faq/compiled - - name: How can I compile the mex files and command-line executable? link: /faq/compile +- name: Can I use FieldTrip without MATLAB license? + link: /faq/compiled + diff --git a/_data/tag/connectivity.yml b/_data/tag/connectivity.yml index b6f53e1f9..1f0a04212 100644 --- a/_data/tag/connectivity.yml +++ b/_data/tag/connectivity.yml @@ -10,18 +10,18 @@ - name: Analysis of corticomuscular coherence link: /tutorial/coherence -- name: Extended analysis of sensor- and source-level connectivity - link: /tutorial/connectivityextended - - name: Analysis of sensor- and source-level connectivity link: /tutorial/connectivity -- name: Whole brain connectivity and network analysis - link: /tutorial/networkanalysis_eeg +- name: Extended analysis of sensor- and source-level connectivity + link: /tutorial/connectivityextended - name: Whole brain connectivity and network analysis link: /tutorial/networkanalysis +- name: Whole brain connectivity and network analysis + link: /tutorial/networkanalysis_eeg + - name: Whole brain connectivity and network analysis link: /tutorial/networkanalysis_old diff --git a/_data/tag/cuttingeeg2021.yml b/_data/tag/cuttingeeg2021.yml index 9df3d3f40..ad867aebd 100644 --- a/_data/tag/cuttingeeg2021.yml +++ b/_data/tag/cuttingeeg2021.yml @@ -1,9 +1,9 @@ -- name: Convert the EEG language dataset for sharing in BIDS - link: /workshop/cuttingeeg2021/bids_language - - name: FieldTrip tutorial at CuttingEEG 2021 in Aix-en-Provence link: /workshop/cuttingeeg2021 +- name: Convert the EEG language dataset for sharing in BIDS + link: /workshop/cuttingeeg2021/bids_language + - name: Time-frequency analysis on short and long timescales link: /workshop/cuttingeeg2021/tutorial_freq diff --git a/_data/tag/dataformat.yml b/_data/tag/dataformat.yml index 8c8d0b543..4762633d8 100644 --- a/_data/tag/dataformat.yml +++ b/_data/tag/dataformat.yml @@ -52,12 +52,12 @@ - name: Getting started with audio data link: /getting_started/audio -- name: Getting started with BabySQUID data - link: /getting_started/babysquid - - name: Getting started with ABM's B-Alert EEG data link: /getting_started/b_alert +- name: Getting started with BabySQUID data + link: /getting_started/babysquid + - name: Getting started with BESA data link: /getting_started/besa @@ -118,12 +118,12 @@ - name: Getting started with MNE(-python) link: /getting_started/mne -- name: Getting started with Neuralynx data recorded at the Donders Institute - link: /getting_started/neuralynx_fcdc - - name: Getting started with Neuralynx data link: /getting_started/neuralynx +- name: Getting started with Neuralynx data recorded at the Donders Institute + link: /getting_started/neuralynx_fcdc + - name: Getting started with Neuromag/Elekta/Megin data link: /getting_started/neuromag diff --git a/_data/tag/dataset.yml b/_data/tag/dataset.yml index 077c22601..75d42fff9 100644 --- a/_data/tag/dataset.yml +++ b/_data/tag/dataset.yml @@ -1,9 +1,9 @@ -- name: Which datasets are used in the documentation and where are they used? - link: /faq/datasets - - name: How can I share my MEG data? link: /faq/data_sharing +- name: Which datasets are used in the documentation and where are they used? + link: /faq/datasets + - name: Where can I find open access MEG/EEG data? link: /faq/open_data diff --git a/_data/tag/development.yml b/_data/tag/development.yml index 71c1753d4..c830ca0a2 100644 --- a/_data/tag/development.yml +++ b/_data/tag/development.yml @@ -1,3 +1,6 @@ +- name: Development + link: /development + - name: Toolbox architecture and organization of the source code link: /development/architecture @@ -31,9 +34,6 @@ - name: Reporting issues link: /development/issues -- name: Development - link: /development - - name: Meetings link: /development/meeting diff --git a/_data/tag/dipole.yml b/_data/tag/dipole.yml index 6d9580eda..c3e7409bb 100644 --- a/_data/tag/dipole.yml +++ b/_data/tag/dipole.yml @@ -1,12 +1,12 @@ +- name: Compute forward simulated data using ft_dipolesimulation + link: /example/compute_forward_simulated_data + - name: Compute forward simulated data and apply a beamformer scan link: /example/compute_forward_simulated_data_and_apply_a_beamformer_scan - name: Compute forward simulated data and apply a dipole fit link: /example/compute_forward_simulated_data_and_apply_a_dipole_fit -- name: Compute forward simulated data using ft_dipolesimulation - link: /example/compute_forward_simulated_data - - name: Compute forward simulated data with the low-level ft_compute_leadfield link: /example/compute_leadfield diff --git a/_data/tag/dtf.yml b/_data/tag/dtf.yml index 097120bb3..484a92b9f 100644 --- a/_data/tag/dtf.yml +++ b/_data/tag/dtf.yml @@ -1,9 +1,9 @@ -- name: Extended analysis of sensor- and source-level connectivity - link: /tutorial/connectivityextended - - name: Analysis of sensor- and source-level connectivity link: /tutorial/connectivity +- name: Extended analysis of sensor- and source-level connectivity + link: /tutorial/connectivityextended + - name: Simulating and estimating, what about model (mis)match? link: /workshop/chieti2015/simulation diff --git a/_data/tag/eeg-audodd.yml b/_data/tag/eeg-audodd.yml index cfdba03bb..70ec812ca 100644 --- a/_data/tag/eeg-audodd.yml +++ b/_data/tag/eeg-audodd.yml @@ -1,15 +1,15 @@ - name: Which datasets are used in the documentation and where are they used? link: /faq/datasets +- name: FieldTrip workshop in Oslo + link: /workshop/oslo2019 + - name: Forward modeling for EEG source reconstruction link: /workshop/oslo2019/forward_modeling - name: Preprocessing and event-related potentials in EEG data link: /workshop/oslo2019/introduction -- name: FieldTrip workshop in Oslo - link: /workshop/oslo2019 - - name: Statistical analysis and multiple comparison correction for EEG data link: /workshop/oslo2019/statistics diff --git a/_data/tag/eeg-sedation.yml b/_data/tag/eeg-sedation.yml index 433157d7c..7902179e2 100644 --- a/_data/tag/eeg-sedation.yml +++ b/_data/tag/eeg-sedation.yml @@ -1,15 +1,15 @@ - name: Which datasets are used in the documentation and where are they used? link: /faq/datasets +- name: FieldTrip workshop in Madrid + link: /workshop/madrid2019 + - name: Convert the EEG sedation dataset for sharing in BIDS link: /workshop/madrid2019/bids_sedation - name: Details on the resting-state EEG dataset recorded with different sedation levels link: /workshop/madrid2019/eeg_sedation -- name: FieldTrip workshop in Madrid - link: /workshop/madrid2019 - - name: Cleaning and processing resting-state EEG link: /workshop/madrid2019/tutorial_cleaning diff --git a/_data/tag/eeg.yml b/_data/tag/eeg.yml index ff646fdf2..f2b2b01ac 100644 --- a/_data/tag/eeg.yml +++ b/_data/tag/eeg.yml @@ -7,12 +7,12 @@ - name: Combined EEG and MEG source reconstruction link: /example/combined_eeg_and_meg_source_reconstruction -- name: Compute forward simulated data and apply a dipole fit - link: /example/compute_forward_simulated_data_and_apply_a_dipole_fit - - name: Compute forward simulated data using ft_dipolesimulation link: /example/compute_forward_simulated_data +- name: Compute forward simulated data and apply a dipole fit + link: /example/compute_forward_simulated_data_and_apply_a_dipole_fit + - name: Compute forward simulated data with the low-level ft_compute_leadfield link: /example/compute_leadfield @@ -199,15 +199,15 @@ - name: Time-frequency analysis on short and long timescales link: /workshop/cuttingeeg2021/tutorial_freq +- name: FieldTrip workshop in Madrid + link: /workshop/madrid2019 + - name: Convert the EEG sedation dataset for sharing in BIDS link: /workshop/madrid2019/bids_sedation - name: Details on the resting-state EEG dataset recorded with different sedation levels link: /workshop/madrid2019/eeg_sedation -- name: FieldTrip workshop in Madrid - link: /workshop/madrid2019 - - name: Cleaning and processing resting-state EEG link: /workshop/madrid2019/tutorial_cleaning @@ -241,15 +241,15 @@ - name: Time-frequency analysis using Hanning window, multitapers and wavelets link: /workshop/ni2_timefrequencyanalysis +- name: FieldTrip workshop in Oslo + link: /workshop/oslo2019 + - name: Forward modeling for EEG source reconstruction link: /workshop/oslo2019/forward_modeling - name: Preprocessing and event-related potentials in EEG data link: /workshop/oslo2019/introduction -- name: FieldTrip workshop in Oslo - link: /workshop/oslo2019 - - name: Statistical analysis and multiple comparison correction for EEG data link: /workshop/oslo2019/statistics diff --git a/_data/tag/example.yml b/_data/tag/example.yml index 7c313beb6..3f3113527 100644 --- a/_data/tag/example.yml +++ b/_data/tag/example.yml @@ -1,3 +1,6 @@ +- name: Example MATLAB scripts + link: /example + - name: Apply non-parametric statistics with clustering on TFRs of power that were computed with BESA link: /example/apply_clusterrandanalysis_on_tfrs_of_power_that_were_computed_with_besa @@ -52,15 +55,15 @@ - name: Common filters in beamforming link: /example/common_filters_in_beamforming +- name: Compute forward simulated data using ft_dipolesimulation + link: /example/compute_forward_simulated_data + - name: Compute forward simulated data and apply a beamformer scan link: /example/compute_forward_simulated_data_and_apply_a_beamformer_scan - name: Compute forward simulated data and apply a dipole fit link: /example/compute_forward_simulated_data_and_apply_a_dipole_fit -- name: Compute forward simulated data using ft_dipolesimulation - link: /example/compute_forward_simulated_data - - name: Compute forward simulated data with the low-level ft_compute_leadfield link: /example/compute_leadfield @@ -91,12 +94,12 @@ - name: Analysis of high-gamma band signals in human ECoG link: /example/ecog_ny -- name: Computing and reporting the effect size - link: /example/effectsize - - name: Effects of tapering for power estimates link: /example/effects_of_tapering +- name: Computing and reporting the effect size + link: /example/effectsize + - name: Align EEG electrode positions to BEM headmodel link: /example/electrodes2bem @@ -163,9 +166,6 @@ - name: Making your own trialfun for conditional trial definition link: /example/making_your_own_trialfun_for_conditional_trial_definition -- name: Example MATLAB scripts - link: /example - - name: Measuring the timing delay and jitter for a real-time application link: /example/measuring_the_timing_delay_and_jitter_for_a_real-time_application @@ -196,27 +196,27 @@ - name: Plotting the result of source reconstruction on a cortical mesh link: /example/plotting_source_surface +- name: Making your analysis pipeline reproducible using reproducescript + link: /example/reproducescript + - name: Using reproducescript on a full study link: /example/reproducescript_andersen - name: Using reproducescript for a group analysis link: /example/reproducescript_group -- name: Making your analysis pipeline reproducible using reproducescript - link: /example/reproducescript - - name: Re-reference EEG and iEEG data link: /example/rereference - name: Using simulations to estimate the sample size for cluster-based permutation test link: /example/samplesize -- name: Create MNI-aligned grids in individual head-space - link: /example/sourcemodel_aligned2mni - - name: Source statistics link: /example/source_statistics +- name: Create MNI-aligned grids in individual head-space + link: /example/sourcemodel_aligned2mni + - name: Analyze Steady-State Visual Evoked Potentials (SSVEPs) link: /example/ssvep diff --git a/_data/tag/faq.yml b/_data/tag/faq.yml index 79ee10710..54d0d8ce5 100644 --- a/_data/tag/faq.yml +++ b/_data/tag/faq.yml @@ -1,3 +1,6 @@ +- name: Frequently Asked Questions + link: /faq + - name: What is the difference between the ACPC, MNI, SPM and TAL coordinate systems? link: /faq/acpc @@ -43,24 +46,24 @@ - name: Which colormaps are supported? link: /faq/colormap -- name: Can I use FieldTrip without MATLAB license? - link: /faq/compiled - - name: How can I compile the mex files and command-line executable? link: /faq/compile +- name: Can I use FieldTrip without MATLAB license? + link: /faq/compiled + - name: How are the different head and MRI coordinate systems defined? link: /faq/coordsys +- name: How can I share my MEG data? + link: /faq/data_sharing + - name: What dataformats are supported? link: /faq/dataformat - name: Which datasets are used in the documentation and where are they used? link: /faq/datasets -- name: How can I share my MEG data? - link: /faq/data_sharing - - name: How can I deal with a discontinuous Neuralynx LFP recording? link: /faq/discontinuous_neuralynx @@ -223,15 +226,6 @@ - name: How to change the MRI orientation, the voxel size or the field-of-view? link: /faq/how_change_mri_orientation_size_fov -- name: How does a difference in trial numbers per condition affect my statistical test - link: /faq/how_does_a_difference_in_trial_numbers_per_condition_affect_my_statistical_test - -- name: How does the CTF higher-order gradiometer work? - link: /faq/how_does_the_ctf_higher-order_gradiometer_work - -- name: How does the filter padding in preprocessing work? - link: /faq/how_does_the_filter_padding_in_preprocessing_work - - name: How do I construct a layout file for the plotting functions? link: /faq/how_do_i_construct_a_layout_file_for_the_plotting_functions @@ -241,6 +235,15 @@ - name: How do I prevent FieldTrip from printing the time and memory after each function call? link: /faq/how_do_i_prevent_fieldtrip_from_printing_the_time_and_memory_after_each_function_call +- name: How does a difference in trial numbers per condition affect my statistical test + link: /faq/how_does_a_difference_in_trial_numbers_per_condition_affect_my_statistical_test + +- name: How does the CTF higher-order gradiometer work? + link: /faq/how_does_the_ctf_higher-order_gradiometer_work + +- name: How does the filter padding in preprocessing work? + link: /faq/how_does_the_filter_padding_in_preprocessing_work + - name: How fast is the FieldTrip buffer for realtime data streaming? link: /faq/how_fast_is_the_fieldtrip_buffer_for_realtime_data_streaming @@ -313,12 +316,18 @@ - name: I have problems reading in neuroscan .cnt files. How can I fix this? link: /faq/i_have_problems_reading_in_neuroscan_.cnt_files._how_can_i_fix_this -- name: Installation and setting up the path - link: /faq/installation +- name: I used ICA on my MEG data from before 2012 and now FieldTrip crashes, why is that? + link: /faq/i_used_ica_on_my_meg_data_from_before_2012_and_now_fieldtrip_crashes_why_is_that + +- name: I used to work with trl-matrices that have more than 3 columns. Why is this not supported anymore? + link: /faq/i_used_to_work_with_trl-matrices_that_have_more_than_3_columns._why_is_this_not_supported_anymore - name: In what way can frequency domain data be represented in FieldTrip? link: /faq/in_what_way_can_frequency_domain_data_be_represented_in_fieldtrip +- name: Installation and setting up the path + link: /faq/installation + - name: Is it good or bad to have dipole locations outside of the brain for which the source reconstruction is computed? link: /faq/is_it_good_or_bad_to_have_dipole_locations_outside_of_the_brain_for_which_the_source_reconstruction_is_computed @@ -331,12 +340,6 @@ - name: How can I compute inter-trial coherence? link: /faq/itc -- name: I used ICA on my MEG data from before 2012 and now FieldTrip crashes, why is that? - link: /faq/i_used_ica_on_my_meg_data_from_before_2012_and_now_fieldtrip_crashes_why_is_that - -- name: I used to work with trl-matrices that have more than 3 columns. Why is this not supported anymore? - link: /faq/i_used_to_work_with_trl-matrices_that_have_more_than_3_columns._why_is_this_not_supported_anymore - - name: MATLAB complains about a missing or invalid mex file, what should I do? link: /faq/matlab_complains_about_a_missing_or_invalid_mex_file_what_should_i_do @@ -352,9 +355,6 @@ - name: MATLAB version 7.3 (2006b) crashes when I try to do ... link: /faq/matlab_version_7.3_2006b_crashes_when_i_try_to_do -- name: Frequently Asked Questions - link: /faq - - name: MATLAB complains that mexmaci64 cannot be opened because the developer cannot be verified link: /faq/mexmaci64_cannot_be_opened_because_the_developer_cannot_be_verified @@ -511,15 +511,15 @@ - name: Why is my message rejected from the email discussion list? link: /faq/why_is_my_message_rejected_from_the_email_discussion_list +- name: Why is the source model deformed or incorrectly aligned after warping template? + link: /faq/why_is_the_source_model_deformed_or_incorrectly_aligned_after_warping_template + - name: Why is there a residual 50Hz line-noise component after applying a DFT filter? link: /faq/why_is_there_a_residual_50hz_line-noise_component_after_applying_a_dft_filter - name: Why is there a rim around the brain for which the source reconstruction is not computed? link: /faq/why_is_there_a_rim_around_the_brain_for_which_the_source_reconstruction_is_not_computed -- name: Why is the source model deformed or incorrectly aligned after warping template? - link: /faq/why_is_the_source_model_deformed_or_incorrectly_aligned_after_warping_template - - name: Why is the largest peak in the spectrum at the frequency which is 1/segment length? link: /faq/why_largest_peak_spectrum diff --git a/_data/tag/fitng2023.yml b/_data/tag/fitng2023.yml index 878b55e50..d6c88260a 100644 --- a/_data/tag/fitng2023.yml +++ b/_data/tag/fitng2023.yml @@ -1,6 +1,6 @@ -- name: Analysis script to perform the group analysis - link: /workshop/fitng2023/do_group_analysis - - name: Interactive Virtual Workshop organized by the Fetal, Infant, & Toddler Neuroimaging Group link: /workshop/fitng2023 +- name: Analysis script to perform the group analysis + link: /workshop/fitng2023/do_group_analysis + diff --git a/_data/tag/freq.yml b/_data/tag/freq.yml index 9722dcf4f..4ba4e3739 100644 --- a/_data/tag/freq.yml +++ b/_data/tag/freq.yml @@ -94,12 +94,12 @@ - name: Cluster-based permutation tests on time-frequency data link: /tutorial/cluster_permutation_freq -- name: Extended analysis of sensor- and source-level connectivity - link: /tutorial/connectivityextended - - name: Analysis of sensor- and source-level connectivity link: /tutorial/connectivity +- name: Extended analysis of sensor- and source-level connectivity + link: /tutorial/connectivityextended + - name: Parametric and non-parametric statistics on event-related fields link: /tutorial/eventrelatedstatistics diff --git a/_data/tag/granger.yml b/_data/tag/granger.yml index 5d62893a2..f681a5979 100644 --- a/_data/tag/granger.yml +++ b/_data/tag/granger.yml @@ -1,12 +1,12 @@ - name: Conditional Granger causality in the frequency domain link: /example/connectivity_conditional_granger -- name: Extended analysis of sensor- and source-level connectivity - link: /tutorial/connectivityextended - - name: Analysis of sensor- and source-level connectivity link: /tutorial/connectivity +- name: Extended analysis of sensor- and source-level connectivity + link: /tutorial/connectivityextended + - name: Simulating and estimating, what about model (mis)match? link: /workshop/chieti2015/simulation diff --git a/_data/tag/guidelines.yml b/_data/tag/guidelines.yml index e7ac7aed3..eb689a3d8 100644 --- a/_data/tag/guidelines.yml +++ b/_data/tag/guidelines.yml @@ -1,3 +1,6 @@ +- name: Guidelines + link: /development/guideline + - name: Code guidelines link: /development/guideline/code @@ -7,9 +10,6 @@ - name: Documentation guidelines this is the title, it should also be the first top-level heading link: /development/guideline/documentation -- name: Guidelines - link: /development/guideline - - name: Template guidelines link: /development/guideline/templates diff --git a/_data/tag/lfp.yml b/_data/tag/lfp.yml index c67a74e4b..d21b3cbb4 100644 --- a/_data/tag/lfp.yml +++ b/_data/tag/lfp.yml @@ -10,12 +10,12 @@ - name: Getting started with Cyberkinetics data link: /getting_started/cyberkinetics -- name: Getting started with Neuralynx data recorded at the Donders Institute - link: /getting_started/neuralynx_fcdc - - name: Getting started with Neuralynx data link: /getting_started/neuralynx +- name: Getting started with Neuralynx data recorded at the Donders Institute + link: /getting_started/neuralynx_fcdc + - name: Getting started with Plexon data link: /getting_started/plexon diff --git a/_data/tag/madrid2019.yml b/_data/tag/madrid2019.yml index 6b51bb227..944826832 100644 --- a/_data/tag/madrid2019.yml +++ b/_data/tag/madrid2019.yml @@ -1,9 +1,9 @@ -- name: Convert the EEG sedation dataset for sharing in BIDS - link: /workshop/madrid2019/bids_sedation - - name: FieldTrip workshop in Madrid link: /workshop/madrid2019 +- name: Convert the EEG sedation dataset for sharing in BIDS + link: /workshop/madrid2019/bids_sedation + - name: Cleaning and processing resting-state EEG link: /workshop/madrid2019/tutorial_cleaning diff --git a/_data/tag/meeting.yml b/_data/tag/meeting.yml index 0ad1d9859..aff0f87ec 100644 --- a/_data/tag/meeting.yml +++ b/_data/tag/meeting.yml @@ -1,3 +1,6 @@ +- name: Meetings + link: /development/meeting + - name: FieldTrip meeting - 20120822 link: /development/meeting/20120822 @@ -229,6 +232,3 @@ - name: FieldTrip meeting - 20160104 link: /development/meeting/20160104 -- name: Meetings - link: /development/meeting - diff --git a/_data/tag/meg-audodd.yml b/_data/tag/meg-audodd.yml index 5ae3f92aa..3c15e2e80 100644 --- a/_data/tag/meg-audodd.yml +++ b/_data/tag/meg-audodd.yml @@ -1,11 +1,14 @@ - name: Which datasets are used in the documentation and where are they used? link: /faq/datasets +- name: Beamforming evoked fields and potentials in combined MEG/EEG data + link: /workshop/aarhus/beamformingerf + - name: FieldTrip workshop in Aarhus link: /workshop/aarhus2015 -- name: Beamforming evoked fields and potentials in combined MEG/EEG data - link: /workshop/aarhus/beamformingerf +- name: FieldTrip course at the NatMEG in Stockholm + link: /workshop/natmeg2014 - name: Beamforming oscillatory responses in combined MEG/EEG data link: /workshop/natmeg2014/beamforming @@ -13,9 +16,6 @@ - name: Dipole fitting of combined MEG/EEG data link: /workshop/natmeg2014/dipolefitting -- name: FieldTrip course at the NatMEG in Stockholm - link: /workshop/natmeg2014 - - name: Details of the auditory oddball MEG+EEG dataset link: /workshop/natmeg2014/meg_audodd diff --git a/_data/tag/meg-uk-2015.yml b/_data/tag/meg-uk-2015.yml index 36706dd6a..6e9730c8d 100644 --- a/_data/tag/meg-uk-2015.yml +++ b/_data/tag/meg-uk-2015.yml @@ -1,3 +1,6 @@ +- name: MEG-UK 2015 meeting + link: /workshop/meg-uk-2015 + - name: Multimodal faces dataset link: /workshop/meg-uk-2015/dataset @@ -16,9 +19,6 @@ - name: General instructions for MATLAB demo's link: /workshop/meg-uk-2015/general -- name: MEG-UK 2015 meeting - link: /workshop/meg-uk-2015 - - name: SPM Source reconstruction demo link: /workshop/meg-uk-2015/spm_source diff --git a/_data/tag/meg.yml b/_data/tag/meg.yml index b4192bca5..ebe350a61 100644 --- a/_data/tag/meg.yml +++ b/_data/tag/meg.yml @@ -40,12 +40,12 @@ - name: Interpolating data from the CTF151 to the CTF275 sensor array using megrealign link: /example/megrealign -- name: Create MNI-aligned grids in individual head-space - link: /example/sourcemodel_aligned2mni - - name: Source statistics link: /example/source_statistics +- name: Create MNI-aligned grids in individual head-space + link: /example/sourcemodel_aligned2mni + - name: Use denoising source separation (DSS) to remove ECG artifacts link: /example/use_denoising_source_separation_dss_to_remove_ecg_artifacts @@ -214,11 +214,14 @@ - name: FieldTrip Walkthrough link: /walkthrough +- name: Beamforming evoked fields and potentials in combined MEG/EEG data + link: /workshop/aarhus/beamformingerf + - name: FieldTrip workshop in Aarhus link: /workshop/aarhus2015 -- name: Beamforming evoked fields and potentials in combined MEG/EEG data - link: /workshop/aarhus/beamformingerf +- name: MEG-UK 2015 meeting + link: /workshop/meg-uk-2015 - name: Multimodal faces dataset link: /workshop/meg-uk-2015/dataset @@ -238,24 +241,21 @@ - name: General instructions for MATLAB demo's link: /workshop/meg-uk-2015/general -- name: MEG-UK 2015 meeting - link: /workshop/meg-uk-2015 - - name: SPM Source reconstruction demo link: /workshop/meg-uk-2015/spm_source - name: SPM Sensor-level stats demo link: /workshop/meg-uk-2015/spm_stats +- name: FieldTrip course at the NatMEG in Stockholm + link: /workshop/natmeg2014 + - name: Beamforming oscillatory responses in combined MEG/EEG data link: /workshop/natmeg2014/beamforming - name: Dipole fitting of combined MEG/EEG data link: /workshop/natmeg2014/dipolefitting -- name: FieldTrip course at the NatMEG in Stockholm - link: /workshop/natmeg2014 - - name: Details of the auditory oddball MEG+EEG dataset link: /workshop/natmeg2014/meg_audodd diff --git a/_data/tag/mex.yml b/_data/tag/mex.yml index c50c57ce8..62d9f3c62 100644 --- a/_data/tag/mex.yml +++ b/_data/tag/mex.yml @@ -1,9 +1,9 @@ -- name: Can I use FieldTrip without MATLAB license? - link: /faq/compiled - - name: How can I compile the mex files and command-line executable? link: /faq/compile +- name: Can I use FieldTrip without MATLAB license? + link: /faq/compiled + - name: How can I compile the mex files on 64-bit Windows? link: /faq/how_can_i_compile_the_mex_files_on_64_bit_windows diff --git a/_data/tag/mmfaces.yml b/_data/tag/mmfaces.yml index 3308d6b01..ee8b774aa 100644 --- a/_data/tag/mmfaces.yml +++ b/_data/tag/mmfaces.yml @@ -4,6 +4,9 @@ - name: Details on the multimodal faces dataset link: /tutorial/mmfaces +- name: MEG-UK 2015 meeting + link: /workshop/meg-uk-2015 + - name: Multimodal faces dataset link: /workshop/meg-uk-2015/dataset @@ -16,9 +19,6 @@ - name: FieldTrip stats demo link: /workshop/meg-uk-2015/fieldtrip-stats-demo -- name: MEG-UK 2015 meeting - link: /workshop/meg-uk-2015 - - name: Multimodal faces dataset link: /workshop/paris2019/dataset diff --git a/_data/tag/natmeg2014.yml b/_data/tag/natmeg2014.yml index 756e2aa5f..17721d96d 100644 --- a/_data/tag/natmeg2014.yml +++ b/_data/tag/natmeg2014.yml @@ -1,12 +1,12 @@ +- name: FieldTrip course at the NatMEG in Stockholm + link: /workshop/natmeg2014 + - name: Beamforming oscillatory responses in combined MEG/EEG data link: /workshop/natmeg2014/beamforming - name: Dipole fitting of combined MEG/EEG data link: /workshop/natmeg2014/dipolefitting -- name: FieldTrip course at the NatMEG in Stockholm - link: /workshop/natmeg2014 - - name: Details of the auditory oddball MEG+EEG dataset link: /workshop/natmeg2014/meg_audodd diff --git a/_data/tag/neuralynx.yml b/_data/tag/neuralynx.yml index fbac329b9..170bf3274 100644 --- a/_data/tag/neuralynx.yml +++ b/_data/tag/neuralynx.yml @@ -4,9 +4,9 @@ - name: How can I deal with a discontinuous Neuralynx LFP recording? link: /faq/discontinuous_neuralynx -- name: Getting started with Neuralynx data recorded at the Donders Institute - link: /getting_started/neuralynx_fcdc - - name: Getting started with Neuralynx data link: /getting_started/neuralynx +- name: Getting started with Neuralynx data recorded at the Donders Institute + link: /getting_started/neuralynx_fcdc + diff --git a/_data/tag/ohbm2018.yml b/_data/tag/ohbm2018.yml index 435b1f52a..1ac650498 100644 --- a/_data/tag/ohbm2018.yml +++ b/_data/tag/ohbm2018.yml @@ -1,12 +1,12 @@ +- name: FieldTrip workshop in Singapore + link: /workshop/ohbm2018 + - name: Solving the EEG and MEG forward problem using the finite element method link: /workshop/ohbm2018/forward - name: Solving the EEG inverse problem link: /workshop/ohbm2018/inverse -- name: FieldTrip workshop in Singapore - link: /workshop/ohbm2018 - - name: Preprocessing of EEG and MEG data link: /workshop/ohbm2018/preprocessing diff --git a/_data/tag/oslo2019.yml b/_data/tag/oslo2019.yml index af898d2a8..0b6b28df1 100644 --- a/_data/tag/oslo2019.yml +++ b/_data/tag/oslo2019.yml @@ -1,3 +1,6 @@ +- name: FieldTrip workshop in Oslo + link: /workshop/oslo2019 + - name: Beamforming oscillatory responses in MEG data link: /workshop/oslo2019/beamforming @@ -7,9 +10,6 @@ - name: Preprocessing and event-related potentials in EEG data link: /workshop/oslo2019/introduction -- name: FieldTrip workshop in Oslo - link: /workshop/oslo2019 - - name: Statistical analysis and multiple comparison correction for EEG data link: /workshop/oslo2019/statistics diff --git a/_data/tag/paris2019.yml b/_data/tag/paris2019.yml index 2eae27ef9..9a43c4d82 100644 --- a/_data/tag/paris2019.yml +++ b/_data/tag/paris2019.yml @@ -1,3 +1,6 @@ +- name: PracticalMEEG workshop at ICM in Paris + link: /workshop/paris2019 + - name: Multimodal faces dataset link: /workshop/paris2019/dataset @@ -16,9 +19,6 @@ - name: Reconstructing source activity using beamformers link: /workshop/paris2019/handson_sourceanalysis -- name: PracticalMEEG workshop at ICM in Paris - link: /workshop/paris2019 - - name: Instructions for the USB stick link: /workshop/paris2019/usb_instructions diff --git a/_data/tag/pdc.yml b/_data/tag/pdc.yml index 097120bb3..484a92b9f 100644 --- a/_data/tag/pdc.yml +++ b/_data/tag/pdc.yml @@ -1,9 +1,9 @@ -- name: Extended analysis of sensor- and source-level connectivity - link: /tutorial/connectivityextended - - name: Analysis of sensor- and source-level connectivity link: /tutorial/connectivity +- name: Extended analysis of sensor- and source-level connectivity + link: /tutorial/connectivityextended + - name: Simulating and estimating, what about model (mis)match? link: /workshop/chieti2015/simulation diff --git a/_data/tag/practicalmeeg2022.yml b/_data/tag/practicalmeeg2022.yml index 11bd4d799..a4ce4703e 100644 --- a/_data/tag/practicalmeeg2022.yml +++ b/_data/tag/practicalmeeg2022.yml @@ -1,3 +1,6 @@ +- name: PracticalMEEG workshop in Aix-en-Provence + link: /workshop/practicalmeeg2022 + - name: Multimodal faces dataset link: /workshop/practicalmeeg2022/dataset @@ -19,6 +22,3 @@ - name: Reconstructing source activity using beamformers link: /workshop/practicalmeeg2022/handson_sourceanalysis -- name: PracticalMEEG workshop in Aix-en-Provence - link: /workshop/practicalmeeg2022 - diff --git a/_data/tag/preprocessing.yml b/_data/tag/preprocessing.yml index 40bf96862..a03c5837b 100644 --- a/_data/tag/preprocessing.yml +++ b/_data/tag/preprocessing.yml @@ -124,12 +124,12 @@ - name: Preprocessing and averaging of single-channel NIRS data link: /tutorial/nirs_singlechannel -- name: Preprocessing of EEG data and computing ERPs - link: /tutorial/preprocessing_erp - - name: Preprocessing - Segmenting and reading trial-based EEG and MEG data link: /tutorial/preprocessing +- name: Preprocessing of EEG data and computing ERPs + link: /tutorial/preprocessing_erp + - name: Sensor-level ERF, TFR and connectivity analyses link: /tutorial/sensor_analysis diff --git a/_data/tag/realtime.yml b/_data/tag/realtime.yml index 592117cc1..4ec28eaef 100644 --- a/_data/tag/realtime.yml +++ b/_data/tag/realtime.yml @@ -1,3 +1,6 @@ +- name: Real-time access to neurophysiological data + link: /development/realtime + - name: Streaming realtime EEG data to and from Arduino link: /development/realtime/arduino @@ -16,6 +19,9 @@ - name: Streaming realtime data from and to BrainStream link: /development/realtime/brainstream +- name: Overview of the realtime buffer + link: /development/realtime/buffer + - name: FieldTrip buffer C implementation link: /development/realtime/buffer_c @@ -28,9 +34,6 @@ - name: FieldTrip buffer MATLAB interface link: /development/realtime/buffer_matlab -- name: Overview of the realtime buffer - link: /development/realtime/buffer - - name: Low-level FieldTrip buffer TCP network protocol link: /development/realtime/buffer_protocol @@ -67,9 +70,6 @@ - name: Streaming realtime data from Jinga-Hi link: /development/realtime/jinga-hi -- name: Real-time access to neurophysiological data - link: /development/realtime - - name: Streaming realtime data from Micromed link: /development/realtime/micromed @@ -145,12 +145,12 @@ - name: How should I get started with the FieldTrip realtime buffer? link: /faq/how_should_i_get_started_with_the_fieldtrip_realtime_buffer -- name: Getting started with real-time head localization in MEG - link: /getting_started/realtime_headlocalizer - - name: Getting started with real-time analysis for BCI/neurofeedback link: /getting_started/realtime +- name: Getting started with real-time head localization in MEG + link: /getting_started/realtime_headlocalizer + - name: Realtime MEG BCI hands-on session in Nijmegen link: /workshop/realtime diff --git a/_data/tag/reproducescript.yml b/_data/tag/reproducescript.yml index 748619774..92f56a735 100644 --- a/_data/tag/reproducescript.yml +++ b/_data/tag/reproducescript.yml @@ -1,9 +1,9 @@ +- name: Making your analysis pipeline reproducible using reproducescript + link: /example/reproducescript + - name: Using reproducescript on a full study link: /example/reproducescript_andersen - name: Using reproducescript for a group analysis link: /example/reproducescript_group -- name: Making your analysis pipeline reproducible using reproducescript - link: /example/reproducescript - diff --git a/_data/tag/script.yml b/_data/tag/script.yml index 4c49ea6e6..4a8a7dec8 100644 --- a/_data/tag/script.yml +++ b/_data/tag/script.yml @@ -1,12 +1,12 @@ +- name: Making your analysis pipeline reproducible using reproducescript + link: /example/reproducescript + - name: Using reproducescript on a full study link: /example/reproducescript_andersen - name: Using reproducescript for a group analysis link: /example/reproducescript_group -- name: Making your analysis pipeline reproducible using reproducescript - link: /example/reproducescript - - name: Speeding up your analysis using distributed computing with parfor link: /tutorial/distributedcomputing_parfor diff --git a/_data/tag/sharing.yml b/_data/tag/sharing.yml index b082c38bb..38306a06a 100644 --- a/_data/tag/sharing.yml +++ b/_data/tag/sharing.yml @@ -1,3 +1,6 @@ +- name: BIDS - the brain imaging data structure + link: /example/bids + - name: Converting an example audio dataset for sharing in BIDS link: /example/bids_audio @@ -13,9 +16,6 @@ - name: Converting an example eyetracker dataset for sharing in BIDS link: /example/bids_eyetracker -- name: BIDS - the brain imaging data structure - link: /example/bids - - name: Converting an example MEG dataset for sharing in BIDS link: /example/bids_meg diff --git a/_data/tag/source.yml b/_data/tag/source.yml index 57702ed05..dbde6ab36 100644 --- a/_data/tag/source.yml +++ b/_data/tag/source.yml @@ -4,15 +4,15 @@ - name: Common filters in beamforming link: /example/common_filters_in_beamforming +- name: Compute forward simulated data using ft_dipolesimulation + link: /example/compute_forward_simulated_data + - name: Compute forward simulated data and apply a beamformer scan link: /example/compute_forward_simulated_data_and_apply_a_beamformer_scan - name: Compute forward simulated data and apply a dipole fit link: /example/compute_forward_simulated_data_and_apply_a_dipole_fit -- name: Compute forward simulated data using ft_dipolesimulation - link: /example/compute_forward_simulated_data - - name: Compute forward simulated data with the low-level ft_compute_leadfield link: /example/compute_leadfield @@ -40,12 +40,12 @@ - name: Plotting the result of source reconstruction on a cortical mesh link: /example/plotting_source_surface -- name: Create MNI-aligned grids in individual head-space - link: /example/sourcemodel_aligned2mni - - name: Source statistics link: /example/source_statistics +- name: Create MNI-aligned grids in individual head-space + link: /example/sourcemodel_aligned2mni + - name: Testing BEM created EEG lead fields link: /example/testing_bem_created_leadfields diff --git a/_data/tag/spike-attention.yml b/_data/tag/spike-attention.yml index b15a19bbc..e9a41c2f4 100644 --- a/_data/tag/spike-attention.yml +++ b/_data/tag/spike-attention.yml @@ -1,9 +1,9 @@ - name: Which datasets are used in the documentation and where are they used? link: /faq/datasets -- name: Preprocessing and analysis of spike and local field potential data - link: /tutorial/spikefield - - name: Preprocessing and analysis of spike-train data link: /tutorial/spike +- name: Preprocessing and analysis of spike and local field potential data + link: /tutorial/spikefield + diff --git a/_data/tag/spike.yml b/_data/tag/spike.yml index 3a21b6e66..0ac749c80 100644 --- a/_data/tag/spike.yml +++ b/_data/tag/spike.yml @@ -13,12 +13,12 @@ - name: Getting started with Cyberkinetics data link: /getting_started/cyberkinetics -- name: Getting started with Neuralynx data recorded at the Donders Institute - link: /getting_started/neuralynx_fcdc - - name: Getting started with Neuralynx data link: /getting_started/neuralynx +- name: Getting started with Neuralynx data recorded at the Donders Institute + link: /getting_started/neuralynx_fcdc + - name: Getting started with Neurodata Without Borders (NWB) data link: /getting_started/nwb @@ -31,9 +31,9 @@ - name: Introduction to the FieldTrip toolbox link: /tutorial/introduction -- name: Preprocessing and analysis of spike and local field potential data - link: /tutorial/spikefield - - name: Preprocessing and analysis of spike-train data link: /tutorial/spike +- name: Preprocessing and analysis of spike and local field potential data + link: /tutorial/spikefield + diff --git a/_data/tag/template.yml b/_data/tag/template.yml index b57058848..6ab755c34 100644 --- a/_data/tag/template.yml +++ b/_data/tag/template.yml @@ -1,6 +1,9 @@ - name: Why are there multiple neighbour templates for the Neuromag306 system? link: /faq/why_are_there_multiple_neighbour_templates_for_the_neuromag306_system +- name: Template models and data + link: /template + - name: Anatomical templates for visualizing source reconstructed activity link: /template/anatomy @@ -22,9 +25,6 @@ - name: Template 2-D layouts for plotting link: /template/layout -- name: Template models and data - link: /template - - name: Templates for defining neighbouring channels link: /template/neighbours diff --git a/_data/tag/toolkit2020.yml b/_data/tag/toolkit2020.yml index 74eb99d9e..cbc46aa7d 100644 --- a/_data/tag/toolkit2020.yml +++ b/_data/tag/toolkit2020.yml @@ -1,12 +1,12 @@ +- name: Advanced MEG/EEG toolkit at the Donders + link: /workshop/toolkit2020 + - name: Code of Conduct link: /workshop/toolkit2020/code_of_conduct - name: Lessons learned link: /workshop/toolkit2020/lessons_learned -- name: Advanced MEG/EEG toolkit at the Donders - link: /workshop/toolkit2020 - - name: Preparation for the online toolkit link: /workshop/toolkit2020/preparation diff --git a/_data/tag/toolkit2021.yml b/_data/tag/toolkit2021.yml index ff79fbefb..683e4e9cb 100644 --- a/_data/tag/toolkit2021.yml +++ b/_data/tag/toolkit2021.yml @@ -1,9 +1,9 @@ -- name: Code of Conduct - link: /workshop/toolkit2021/code_of_conduct - - name: Advanced MEG/EEG toolkit at the Donders link: /workshop/toolkit2021 +- name: Code of Conduct + link: /workshop/toolkit2021/code_of_conduct + - name: Test your MATLAB and FieldTrip installation in advance link: /workshop/toolkit2021/test_installation diff --git a/_data/tag/toolkit2022.yml b/_data/tag/toolkit2022.yml index 88ec8cd34..19abfc3a2 100644 --- a/_data/tag/toolkit2022.yml +++ b/_data/tag/toolkit2022.yml @@ -1,9 +1,9 @@ -- name: Code of Conduct - link: /workshop/toolkit2022/code_of_conduct - - name: Advanced MEG/EEG toolkit at the Donders link: /workshop/toolkit2022 +- name: Code of Conduct + link: /workshop/toolkit2022/code_of_conduct + - name: Test your MATLAB and FieldTrip installation in advance link: /workshop/toolkit2022/test_installation diff --git a/_data/tag/toolkit2023.yml b/_data/tag/toolkit2023.yml index 421f8c315..c006e969b 100644 --- a/_data/tag/toolkit2023.yml +++ b/_data/tag/toolkit2023.yml @@ -1,9 +1,9 @@ -- name: Code of Conduct - link: /workshop/toolkit2023/code_of_conduct - - name: Advanced MEG/EEG toolkit at the Donders link: /workshop/toolkit2023 +- name: Code of Conduct + link: /workshop/toolkit2023/code_of_conduct + - name: Test your MATLAB and FieldTrip installation in advance link: /workshop/toolkit2023/test_installation diff --git a/_data/tag/toolkit2024.yml b/_data/tag/toolkit2024.yml index 006ad1a14..885b8fe78 100644 --- a/_data/tag/toolkit2024.yml +++ b/_data/tag/toolkit2024.yml @@ -1,9 +1,9 @@ -- name: Code of Conduct - link: /workshop/toolkit2024/code_of_conduct - - name: Advanced MEG/EEG toolkit at the Donders link: /workshop/toolkit2024 +- name: Code of Conduct + link: /workshop/toolkit2024/code_of_conduct + - name: Test your MATLAB and FieldTrip installation in advance link: /workshop/toolkit2024/test_installation diff --git a/_data/tag/trialdef.yml b/_data/tag/trialdef.yml index 916370f04..07a8dda85 100644 --- a/_data/tag/trialdef.yml +++ b/_data/tag/trialdef.yml @@ -4,12 +4,12 @@ - name: Making your own trialfun for conditional trial definition link: /example/making_your_own_trialfun_for_conditional_trial_definition -- name: Is it possible to keep track of trial-specific information in my analysis pipeline? - link: /faq/is_it_possible_to_keep_track_of_trial-specific_information_in_my_fieldtrip_analysis_pipeline - - name: I used to work with trl-matrices that have more than 3 columns. Why is this not supported anymore? link: /faq/i_used_to_work_with_trl-matrices_that_have_more_than_3_columns._why_is_this_not_supported_anymore +- name: Is it possible to keep track of trial-specific information in my analysis pipeline? + link: /faq/is_it_possible_to_keep_track_of_trial-specific_information_in_my_fieldtrip_analysis_pipeline + - name: FieldTrip Walkthrough link: /walkthrough diff --git a/_data/tag/trialfun.yml b/_data/tag/trialfun.yml index 7feac7bf1..250ac4783 100644 --- a/_data/tag/trialfun.yml +++ b/_data/tag/trialfun.yml @@ -7,12 +7,12 @@ - name: How can I transform trigger values from bits to decimal representation with a trialfun? link: /faq/how_can_i_transform_trigger_values_from_bits_to_decimal_representation_with_a_trialfun -- name: Is it possible to keep track of trial-specific information in my analysis pipeline? - link: /faq/is_it_possible_to_keep_track_of_trial-specific_information_in_my_fieldtrip_analysis_pipeline - - name: I used to work with trl-matrices that have more than 3 columns. Why is this not supported anymore? link: /faq/i_used_to_work_with_trl-matrices_that_have_more_than_3_columns._why_is_this_not_supported_anymore +- name: Is it possible to keep track of trial-specific information in my analysis pipeline? + link: /faq/is_it_possible_to_keep_track_of_trial-specific_information_in_my_fieldtrip_analysis_pipeline + - name: How can I check or decipher the sequence of triggers in my data? link: /faq/triggers diff --git a/_data/tag/trialinfo.yml b/_data/tag/trialinfo.yml index 7513e71ca..22bb0ac15 100644 --- a/_data/tag/trialinfo.yml +++ b/_data/tag/trialinfo.yml @@ -1,6 +1,6 @@ -- name: Is it possible to keep track of trial-specific information in my analysis pipeline? - link: /faq/is_it_possible_to_keep_track_of_trial-specific_information_in_my_fieldtrip_analysis_pipeline - - name: I used to work with trl-matrices that have more than 3 columns. Why is this not supported anymore? link: /faq/i_used_to_work_with_trl-matrices_that_have_more_than_3_columns._why_is_this_not_supported_anymore +- name: Is it possible to keep track of trial-specific information in my analysis pipeline? + link: /faq/is_it_possible_to_keep_track_of_trial-specific_information_in_my_fieldtrip_analysis_pipeline + diff --git a/_data/tag/tutorial.yml b/_data/tag/tutorial.yml index fcafa64ad..c617899ba 100644 --- a/_data/tag/tutorial.yml +++ b/_data/tag/tutorial.yml @@ -1,6 +1,9 @@ - name: Which datasets are used in the documentation and where are they used? link: /faq/datasets +- name: Overview of all tutorials + link: /tutorial + - name: Introduction on dealing with artifacts link: /tutorial/artifacts @@ -22,12 +25,12 @@ - name: Analysis of corticomuscular coherence link: /tutorial/coherence -- name: Extended analysis of sensor- and source-level connectivity - link: /tutorial/connectivityextended - - name: Analysis of sensor- and source-level connectivity link: /tutorial/connectivity +- name: Extended analysis of sensor- and source-level connectivity + link: /tutorial/connectivityextended + - name: Preprocessing - Reading continuous EEG and MEG data link: /tutorial/continuous @@ -73,9 +76,6 @@ - name: Specifying the channel layout for plotting link: /tutorial/layout -- name: Overview of all tutorials - link: /tutorial - - name: Making a memory efficient analysis pipeline link: /tutorial/memory @@ -89,10 +89,10 @@ link: /tutorial/mvpa_light - name: Whole brain connectivity and network analysis - link: /tutorial/networkanalysis_eeg + link: /tutorial/networkanalysis - name: Whole brain connectivity and network analysis - link: /tutorial/networkanalysis + link: /tutorial/networkanalysis_eeg - name: Whole brain connectivity and network analysis link: /tutorial/networkanalysis_old @@ -106,12 +106,12 @@ - name: Plotting data at the channel and source level link: /tutorial/plotting -- name: Preprocessing of EEG data and computing ERPs - link: /tutorial/preprocessing_erp - - name: Preprocessing - Segmenting and reading trial-based EEG and MEG data link: /tutorial/preprocessing +- name: Preprocessing of EEG data and computing ERPs + link: /tutorial/preprocessing_erp + - name: Preprocessing of Optically Pumped Magnetometer (OPM) data link: /tutorial/preprocessing_opm @@ -127,12 +127,12 @@ - name: Creating a sourcemodel for source reconstruction of MEG or EEG data link: /tutorial/sourcemodel -- name: Preprocessing and analysis of spike and local field potential data - link: /tutorial/spikefield - - name: Preprocessing and analysis of spike-train data link: /tutorial/spike +- name: Preprocessing and analysis of spike and local field potential data + link: /tutorial/spikefield + - name: Time-frequency analysis using Hanning window, multitapers and wavelets link: /tutorial/timefrequencyanalysis