From 8ae8a35ee26e562fa51ed20ddb4a8a2b87164cfd Mon Sep 17 00:00:00 2001 From: Robert Oostenveld Date: Wed, 25 Sep 2024 09:24:11 +0200 Subject: [PATCH] added script to parse categories and show them just like tags --- _data/category/example.yml | 258 +++++++++++++ _data/category/faq.yml | 561 +++++++++++++++++++++++++++++ _data/category/getting_started.yml | 159 ++++++++ _data/category/tutorial.yml | 159 ++++++++ _includes/category | 7 + _includes/right | 2 + _includes/tags | 2 + _layouts/category.html | 39 ++ _scripts/categories.sh | 38 ++ _scripts/tags.sh | 16 +- category/example.md | 4 + category/faq.md | 4 + category/getting_started.md | 4 + category/tutorial.md | 4 + example.md | 2 +- faq.md | 2 +- getting_started.md | 1 + tutorial.md | 2 +- 18 files changed, 1253 insertions(+), 11 deletions(-) create mode 100644 _data/category/example.yml create mode 100644 _data/category/faq.yml create mode 100644 _data/category/getting_started.yml create mode 100644 _data/category/tutorial.yml create mode 100644 _includes/category create mode 100644 _layouts/category.html create mode 100755 _scripts/categories.sh create mode 100644 category/example.md create mode 100644 category/faq.md create mode 100644 category/getting_started.md create mode 100644 category/tutorial.md diff --git a/_data/category/example.yml b/_data/category/example.yml new file mode 100644 index 000000000..f0802f3a4 --- /dev/null +++ b/_data/category/example.yml @@ -0,0 +1,258 @@ +- name: Example MATLAB scripts + link: /example + +- name: Apply non-parametric statistics with clustering on TFRs of power that were computed with BESA + link: /example/apply_clusterrandanalysis_on_tfrs_of_power_that_were_computed_with_besa + +- name: BIDS - the brain imaging data structure + link: /example/bids + +- name: Converting an example audio dataset for sharing in BIDS + link: /example/bids_audio + +- name: Converting an example behavioral dataset for sharing in BIDS + link: /example/bids_behavioral + +- name: Converting an example EEG dataset for sharing in BIDS + link: /example/bids_eeg + +- name: Converting an example EMG dataset for sharing in BIDS + link: /example/bids_emg + +- name: Converting an example eyetracker dataset for sharing in BIDS + link: /example/bids_eyetracker + +- name: Converting an example MEG dataset for sharing in BIDS + link: /example/bids_meg + +- name: Converting an example motion tracking dataset for sharing in BIDS + link: /example/bids_motion + +- name: Converting the combined MEG/fMRI MOUS dataset for sharing in BIDS + link: /example/bids_mous + +- name: Converting an example NIRS dataset for sharing in BIDS + link: /example/bids_nirs + +- name: Combining simultaneous recordings in BIDS + link: /example/bids_pom + +- name: Converting an example video dataset for sharing in BIDS + link: /example/bids_video + +- name: Example analysis pipeline for Biosemi data + link: /example/biosemi + +- name: How to use ft_checkconfig + link: /example/checkconfig + +- name: Effect of SNR on Coherence + link: /example/coherence_snr + +- name: Combined EEG and MEG source reconstruction + link: /example/combined_eeg_and_meg_source_reconstruction + +- name: The correct pipeline order for combining planar MEG channels + link: /example/combineplanar_pipelineorder + +- name: Common filters in beamforming + link: /example/common_filters_in_beamforming + +- name: Compute forward simulated data using ft_dipolesimulation + link: /example/compute_forward_simulated_data + +- name: Compute forward simulated data and apply a beamformer scan + link: /example/compute_forward_simulated_data_and_apply_a_beamformer_scan + +- name: Compute forward simulated data and apply a dipole fit + link: /example/compute_forward_simulated_data_and_apply_a_dipole_fit + +- name: Compute forward simulated data with the low-level ft_compute_leadfield + link: /example/compute_leadfield + +- name: Conditional Granger causality in the frequency domain + link: /example/connectivity_conditional_granger + +- name: Check the quality of the anatomical coregistration + link: /example/coregistration_quality_control + +- name: Correlation analysis of fMRI data + link: /example/correlation_analysis_in_fmri_data + +- name: Cross-frequency analysis + link: /example/crossfreq + +- name: Detect the muscle activity in an EMG channel and use that as trial definition + link: /example/detect_the_muscle_activity_in_an_emg_channel_and_use_that_as_trial_definition + +- name: Determine the filter characteristics + link: /example/determine_the_filter_characteristics + +- name: Localizing the sources underlying the difference in event-related fields + link: /example/difference_erf + +- name: Fit a dipole to the tactile ERF after mechanical stimulation + link: /example/dipolefit_somatosensory_erf + +- name: Analysis of high-gamma band signals in human ECoG + link: /example/ecog_ny + +- name: Effects of tapering for power estimates + link: /example/effects_of_tapering + +- name: Computing and reporting the effect size + link: /example/effectsize + +- name: Align EEG electrode positions to BEM headmodel + link: /example/electrodes2bem + +- name: Perform modified Multiscale Entropy (mMSE) analysis on EEG/MEG/LFP data + link: /example/entropy_analysis + +- name: Compute EEG leadfields using a FEM headmodel + link: /example/fem + +- name: How to create a head model if you do not have an individual MRI + link: /example/fittemplate + +- name: Fixing a missing channel + link: /example/fixing_a_missing_sensor + +- name: Fitting oscillations and one-over-F (FOOOF) + link: /example/fooof + +- name: Example real-time average + link: /example/ft_realtime_average + +- name: Example real-time classification + link: /example/ft_realtime_classification + +- name: Realtime neurofeedback application based on Hilbert phase estimation + link: /example/ft_realtime_hilbert + +- name: Example real-time power estimate + link: /example/ft_realtime_powerestimate + +- name: Example real-time selective average + link: /example/ft_realtime_selectiveaverage + +- name: Example real-time signal viewer + link: /example/ft_realtime_signalviewer + +- name: Getting started with reading raw EEG or MEG data + link: /example/getting_started_with_reading_raw_eeg_or_meg_data + +- name: Using General Linear Modeling on time series data + link: /example/glm_timeseries + +- name: Using General Linear Modeling over trials + link: /example/glm_trials + +- name: How to incorporate head movements in MEG analysis + link: /example/headmovement_meg + +- name: Independent component analysis (ICA) to remove ECG artifacts + link: /example/ica_ecg + +- name: Independent component analysis (ICA) to remove EOG artifacts + link: /example/ica_eog + +- name: How to import data from MNE-Python and FreeSurfer + link: /example/import_mne + +- name: Irregular Resampling Auto-Spectral Analysis (IRASA) + link: /example/irasa + +- name: Make MEG leadfields using different headmodels + link: /example/make_leadfields_using_different_headmodels + +- name: Measuring the timing delay and jitter for a real-time application + link: /example/measuring_the_timing_delay_and_jitter_for_a_real-time_application + +- name: Combine MEG with Eyelink eyetracker data + link: /example/meg_eyelink + +- name: Interpolating data from the CTF151 to the CTF275 sensor array using megrealign + link: /example/megrealign + +- name: Defining electrodes as neighbours for cluster-level statistics + link: /example/neighbours + +- name: Analyzing NIRS data recorded during unilateral finger- and foot-tapping + link: /example/nirs_fingertapping + +- name: Using GLM to analyze NIRS timeseries data + link: /example/nirs_glm + +- name: Creating a layout for plotting NIRS optodes and channels + link: /example/nirs_layout + +- name: Analyzing NIRS data recorded during listening to and repeating speech + link: /example/nirs_speech + +- name: Simulate an oscillatory signal with phase resetting + link: /example/phase_reset + +- name: Find the orientation of planar gradiometers + link: /example/planar_orientation + +- name: Plotting the result of source reconstruction on a cortical mesh + link: /example/plotting_source_surface + +- name: Making your analysis pipeline reproducible using reproducescript + link: /example/reproducescript + +- name: Using reproducescript on a full study + link: /example/reproducescript_andersen + +- name: Using reproducescript for a group analysis + link: /example/reproducescript_group + +- name: Re-reference EEG and iEEG data + link: /example/rereference + +- name: Using simulations to estimate the sample size for cluster-based permutation test + link: /example/samplesize + +- name: Source statistics + link: /example/source_statistics + +- name: Create MNI-aligned grids in individual head-space + link: /example/sourcemodel_aligned2mni + +- name: Fitting a template MRI to the MEG Polhemus head shape + link: /example/sphere_fitting + +- name: Analyze Steady-State Visual Evoked Potentials (SSVEPs) + link: /example/ssvep + +- name: Stratify the distribution of one variable that differs in two conditions + link: /example/stratify + +- name: Symmetric dipole pairs for beamforming + link: /example/symmetry + +- name: Testing BEM created EEG lead fields + link: /example/testing_bem_created_leadfields + +- name: Using threshold-free cluster enhancement for cluster statistics + link: /example/threshold_free_cluster_enhancement + +- name: Making your own trialfun for conditional trial definition + link: /example/trialfun + +- name: Use denoising source separation (DSS) to remove ECG artifacts + link: /example/use_denoising_source_separation_dss_to_remove_ecg_artifacts + +- name: Use simulated ERPs to explore cluster statistics + link: /example/use_simulated_erps_to_explore_cluster_statistics + +- name: Use your own forward leadfield model in an inverse beamformer computation + link: /example/use_your_own_forward_leadfield_model_in_an_inverse_beamformer_computation + +- name: Making a synchronous movie of EEG or NIRS combined with video recordings + link: /example/video_eeg + +- name: Can I create an artificial CTF dataset using MATLAB? + link: /example/writing_simulated_data_to_a_ctf_dataset + diff --git a/_data/category/faq.yml b/_data/category/faq.yml new file mode 100644 index 000000000..19a9aefdc --- /dev/null +++ b/_data/category/faq.yml @@ -0,0 +1,561 @@ +- name: Frequently Asked Questions + link: /faq + +- name: What is the difference between the ACPC, MNI, SPM and TAL coordinate systems? + link: /faq/acpc + +- name: Where is the anterior commissure? + link: /faq/anterior_commissure + +- name: How can I append the files of two separate recordings? + link: /faq/append_files + +- name: How can I play back EEG/MEG and synchronous audio or video? + link: /faq/audiovideo + +- name: How should I specify the coordinate systems in a BIDS dataset? + link: /faq/bids_coordsystem + +- name: Can I do combined EEG and MEG source reconstruction? + link: /faq/can_i_do_combined_eeg_and_meg_source_reconstruction + +- name: Can I get an offline version of the documentation on the website? + link: /faq/can_i_get_an_offline_version_of_the_wiki_documentation + +- name: Can I organize my own FieldTrip workshop? + link: /faq/can_i_organize_my_own_workshop + +- name: Can I prevent "external" toolboxes from being added to my MATLAB path? + link: /faq/can_i_prevent_external_toolboxes_from_being_added_to_my_matlab_path + +- name: Can I restrict the source reconstruction to the grey matter? + link: /faq/can_i_restrict_the_source_reconstruction_to_the_grey_matter + +- name: Can I use Octave instead of MATLAB? + link: /faq/can_i_use_octave_instead_of_matlab + +- name: Can I use the FieldTrip logo on my poster? + link: /faq/can_i_use_the_fieldtrip_logo_on_my_poster + +- name: Can I compare EEG channels between different electrode caps? + link: /faq/capmapping + +- name: Which methodological details should I report in an EEG/MEG manuscript? + link: /faq/checklist + +- name: What does the coilaccuracy parameter do? + link: /faq/coilaccuracy + +- name: Which colormaps are supported? + link: /faq/colormap + +- name: How can I compile the mex files and command-line executable? + link: /faq/compile + +- name: Can I use FieldTrip without MATLAB license? + link: /faq/compiled + +- name: Why should I set continuous to yes for CTF data? + link: /faq/continuous + +- name: How are the different head and MRI coordinate systems defined? + link: /faq/coordsys + +- name: How can I share my MEG data? + link: /faq/data_sharing + +- name: What dataformats are supported? + link: /faq/dataformat + +- name: Which datasets are used in the documentation and where are they used? + link: /faq/datasets + +- name: How can I deal with a discontinuous Neuralynx LFP recording? + link: /faq/discontinuous_neuralynx + +- name: Does the FieldTrip realtime buffer only work with MATLAB? + link: /faq/does_the_fieldtrip_realtime_buffer_only_work_with_matlab + +- name: Does it make sense to subtract the ERP prior to time frequency analysis, to distinguish evoked from induced power? + link: /faq/evoked_vs_induced + +- name: Which external toolboxes are used by FieldTrip? + link: /faq/external + +- name: How should I specify the fiducials for electrode realignment? + link: /faq/fiducial + +- name: What material is used for the flexible MEG headcasts? + link: /faq/headcast + +- name: How do homogenous coordinate transformation matrices work? + link: /faq/homogenous + +- name: How are electrodes, magnetometers or gradiometers described? + link: /faq/how_are_electrodes_magnetometers_or_gradiometers_described + +- name: How are the Left and Right Pre-Auricular (LPA and RPA) points defined? + link: /faq/how_are_the_lpa_and_rpa_points_defined + +- name: How are the various MATLAB data structures defined? + link: /faq/how_are_the_various_data_structures_defined + +- name: How can I anonymize or deidentify a BrainVision dataset? + link: /faq/how_can_i_anonymize_a_brainvision_dataset + +- name: How can I anonymize or deidentify a CTF dataset? + link: /faq/how_can_i_anonymize_a_ctf_dataset + +- name: How can I anonymize or deidentify an anatomical MRI? + link: /faq/how_can_i_anonymize_an_anatomical_mri + +- name: How can I anonymize or deidentify DICOM files? + link: /faq/how_can_i_anonymize_dicom_files + +- name: How can I anonymize data processed in FieldTrip? + link: /faq/how_can_i_anonymize_fieldtrip_data + +- name: How can I change the head localization in a CTF dataset? + link: /faq/how_can_i_change_the_head_localization_in_a_ctf_dataset + +- name: How can I check whether the grid that I have is aligned to the segmented volume and to the sensor gradiometer? + link: /faq/how_can_i_check_whether_the_grid_that_i_have_is_aligned_to_the_segmented_volume_and_to_the_sensor_gradiometer + +- name: How can I compile the mex files on 64-bit Windows? + link: /faq/how_can_i_compile_the_mex_files_on_64_bit_windows + +- name: How can I compile the mex files on macOS? + link: /faq/how_can_i_compile_the_mex_files_on_os_x + +- name: How can I consistently represent artifacts in my data? + link: /faq/how_can_i_consistently_represent_artifacts_in_my_data + +- name: How can I convert an anatomical MRI from DICOM into CTF format? + link: /faq/how_can_i_convert_an_anatomical_mri_from_dicom_into_ctf_format + +- name: How can I convert one dataformat into an other? + link: /faq/how_can_i_convert_one_dataformat_into_an_other + +- name: How can I debug my analysis script if a FieldTrip function gives an error? + link: /faq/how_can_i_debug_my_analysis_script_if_a_fieldtrip_function_gives_an_error + +- name: How can I define neighbouring sensors? + link: /faq/how_can_i_define_neighbouring_sensors + +- name: How can I determine the anatomical label of a source or electrode? + link: /faq/how_can_i_determine_the_anatomical_label_of_a_source + +- name: How can I determine the onset of an effect? + link: /faq/how_can_i_determine_the_onset_of_an_effect + +- name: How can I distribute a batch of jobs? + link: /faq/how_can_i_distribute_a_batch_of_jobs + +- name: How can I do time-frequency analysis on continuous data? + link: /faq/how_can_i_do_time-frequency_analysis_on_continuous_data + +- name: Which version of FieldTrip should I download? + link: /faq/how_can_i_download_a_specific_version + +- name: How can I extend the reading functions with a new dataformat? + link: /faq/how_can_i_extend_the_reading_functions_with_a_new_dataformat + +- name: How can I find out what eventvalues and eventtypes there are in my data? + link: /faq/how_can_i_find_out_what_eventvalues_and_eventtypes_there_are_in_my_data + +- name: How can I fine-tune my BEM volume conduction model? + link: /faq/how_can_i_fine-tune_my_bem_volume_conduction_model + +- name: How can I fix a corrupt CTF meg4 file? + link: /faq/how_can_i_fix_a_corrupt_ctf_meg4_data_file + +- name: How can I fix a corrupt CTF res4 header file? + link: /faq/how_can_i_fix_a_corrupt_ctf_res4_header_file + +- name: How can I import my own data format? + link: /faq/how_can_i_import_my_own_dataformat + +- name: How can I inspect the electrode impedances of my data? + link: /faq/how_can_i_inspect_the_electrode_impedances_of_my_data + +- name: How can I interpret the different types of padding in FieldTrip? + link: /faq/how_can_i_interpret_the_different_types_of_padding_that_i_find_when_dealing_with_artifacts + +- name: How can I keep track of changes to the code? + link: /faq/how_can_i_keep_track_of_the_changes_to_the_code + +- name: How can I map source locations onto an anatomical label in an atlas? + link: /faq/how_can_i_map_source_locations_between_two_different_representations + +- name: How can I merge two datasets that were acquired simultaneously with different amplifiers? + link: /faq/how_can_i_merge_two_datasets_that_were_acquired_simultaneously_with_different_amplifiers + +- name: How can I monitor a subject's head position during a MEG session? + link: /faq/how_can_i_monitor_a_subject_s_head_position_during_a_meg_session + +- name: How can I preprocess a dataset that is too large to fit into memory? + link: /faq/how_can_i_preprocess_a_dataset_that_is_too_large_to_fit_into_memory + +- name: How can I process continuous data without triggers? + link: /faq/how_can_i_process_continuous_data_without_triggers + +- name: How can I read all channels from an EDF file that contains multiple sampling rates? + link: /faq/how_can_i_read_all_channels_from_an_edf_file_that_contains_multiple_sampling_rates + +- name: How can I read corrupted (unsaved) CTF data? + link: /faq/how_can_i_read_corrupted_unsaved_ctf_data + +- name: How can I read EGI mff data without the JVM? + link: /faq/how_can_i_read_egi_mff_data_without_the_jvm + +- name: How to test an interaction effect using cluster-based permutation tests? + link: /faq/how_can_i_test_an_interaction_effect_using_cluster-based_permutation_tests + +- name: How can I test for correlations between neuronal data and quantitative stimulus and behavioral variables? + link: /faq/how_can_i_test_for_correlations_between_neuronal_data_and_quantitative_stimulus_and_behavioural_variables + +- name: What kind of cable do I need for a serial port connection between two computers? + link: /faq/how_can_i_test_the_serial_port_connection_between_two_computers + +- name: How can I test whether a behavioral measure is phasic? + link: /faq/how_can_i_test_whether_a_behavioral_measure_is_phasic + +- name: How can I transform trigger values from bits to decimal representation with a trialfun? + link: /faq/how_can_i_transform_trigger_values_from_bits_to_decimal_representation_with_a_trialfun + +- name: How can I use my MacBook Pro for stimulus presentation in the MEG lab? + link: /faq/how_can_i_use_my_macbook_pro_for_stimulus_presentation_in_the_meg_lab + +- name: How can I use the databrowser? + link: /faq/how_can_i_use_the_databrowser + +- name: How can I use the ivar, uvar, wvar and cvar options to precisely control the permutations? + link: /faq/how_can_i_use_the_ivar_uvar_wvar_and_cvar_options_to_precisely_control_the_permutations + +- name: How can I visualize a localspheres volume conductor model? + link: /faq/how_can_i_visualize_a_localspheres_volume_conductor_model + +- name: How can I visualize the different geometrical objects that are needed for forward and inverse computations? + link: /faq/how_can_i_visualize_the_different_geometrical_objects_that_are_needed_for_forward_and_inverse_computations + +- name: How can I visualize the neuromag head position indicator coils? + link: /faq/how_can_i_visualize_the_neuromag_head_position_indicator_coils + +- name: How to change the MRI orientation, the voxel size or the field-of-view? + link: /faq/how_change_mri_orientation_size_fov + +- name: How do I construct a layout file for the plotting functions? + link: /faq/how_do_i_construct_a_layout_file_for_the_plotting_functions + +- name: How do I install the OpenMEEG binaries + link: /faq/how_do_i_install_the_openmeeg_binaries + +- name: How do I prevent FieldTrip from printing the time and memory after each function call? + link: /faq/how_do_i_prevent_fieldtrip_from_printing_the_time_and_memory_after_each_function_call + +- name: How does a difference in trial numbers per condition affect my statistical test + link: /faq/how_does_a_difference_in_trial_numbers_per_condition_affect_my_statistical_test + +- name: How does ft_prepare_neighbours work? + link: /faq/how_does_ft_prepare_neighbours_work + +- name: How does the CTF higher-order gradiometer work? + link: /faq/how_does_the_ctf_higher-order_gradiometer_work + +- name: How does the filter padding in preprocessing work? + link: /faq/how_does_the_filter_padding_in_preprocessing_work + +- name: How fast is the FieldTrip buffer for realtime data streaming? + link: /faq/how_fast_is_the_fieldtrip_buffer_for_realtime_data_streaming + +- name: How is anatomical, functional or statistical "volume data" described? + link: /faq/how_is_anatomical_functional_or_statistical_volume_data_described + +- name: How is the segmentation defined? + link: /faq/how_is_the_segmentation_defined + +- name: How many lines of code does FieldTrip consist of? + link: /faq/how_many_lines_of_code_does_fieldtrip_consist_of + +- name: How many people are subscribed to the email discussion list? + link: /faq/how_many_people_are_subscribed_to_the_email_discussion_list + +- name: How NOT to interpret results from a cluster-based permutation test + link: /faq/how_not_to_interpret_results_from_a_cluster-based_permutation_test + +- name: How should I get started with the FieldTrip realtime buffer? + link: /faq/how_should_i_get_started_with_the_fieldtrip_realtime_buffer + +- name: How should I prepare for the upcoming FieldTrip workshop? + link: /faq/how_should_i_prepare_for_the_upcoming_fieldtrip_workshop + +- name: How should I refer to FieldTrip in my publication? + link: /faq/how_should_i_refer_to_fieldtrip_in_my_publication + +- name: How should I report the positions of the fiducial points on the head? + link: /faq/how_should_i_report_the_positions_of_the_fiducial_points_on_the_head + +- name: How should I share example data with the email list or developers? + link: /faq/how_should_i_send_example_data_to_the_developers + +- name: How to ask good questions to the community? + link: /faq/how_to_ask_good_questions_to_the_community + +- name: How to compile MATLAB code into stand-alone executables? + link: /faq/how_to_compile_matlab_code_into_stand-alone_executables + +- name: How to coregister an anatomical MRI with the gradiometer or electrode positions? + link: /faq/how_to_coregister_an_anatomical_mri_with_the_gradiometer_or_electrode_positions + +- name: How to get started with distributed computing using qsub? + link: /faq/how_to_get_started_with_distributed_computing_using_qsub + +- name: How to get started with the MATLAB distributed computing toolbox? + link: /faq/how_to_get_started_with_the_matlab_distributed_computing_toolbox + +- name: How to interpret the sign of the phase slope index? + link: /faq/how_to_interpret_the_sign_of_the_phase_slope_index + +- name: How to select the correct SPM toolbox? + link: /faq/how_to_select_the_correct_spm_toolbox + +- name: I am getting strange artifacts in figures that use opacity + link: /faq/i_am_getting_strange_artifacts_in_figures_that_use_opacity + +- name: I am having problems downloading + link: /faq/i_am_having_problems_downloading + +- name: I am having problems printing figures that use opacity + link: /faq/i_am_having_problems_printing_figures_that_use_opacity + +- name: I am having problems reading the CTF .hc headcoordinates file + link: /faq/i_am_having_problems_reading_the_ctf_.hc_headcoordinates_file + +- name: I am working at the Donders, should I also download FieldTrip? + link: /faq/i_am_working_at_the_donders_should_i_also_download_fieldtrip + +- name: I have problems reading in neuroscan .cnt files. How can I fix this? + link: /faq/i_have_problems_reading_in_neuroscan_.cnt_files._how_can_i_fix_this + +- name: I used ICA on my MEG data from before 2012 and now FieldTrip crashes, why is that? + link: /faq/i_used_ica_on_my_meg_data_from_before_2012_and_now_fieldtrip_crashes_why_is_that + +- name: I used to work with trl-matrices that have more than 3 columns. Why is this not supported anymore? + link: /faq/i_used_to_work_with_trl-matrices_that_have_more_than_3_columns._why_is_this_not_supported_anymore + +- name: In what way can frequency domain data be represented in FieldTrip? + link: /faq/in_what_way_can_frequency_domain_data_be_represented_in_fieldtrip + +- name: Installation and setting up the path + link: /faq/installation + +- name: Is it good or bad to have dipole locations outside of the brain for which the source reconstruction is computed? + link: /faq/is_it_good_or_bad_to_have_dipole_locations_outside_of_the_brain_for_which_the_source_reconstruction_is_computed + +- name: Is it important to have accurate measurements of electrode locations for EEG source reconstruction? + link: /faq/is_it_important_to_have_accurate_measurements_of_electrode_locations_for_eeg_source_reconstruction + +- name: Is it possible to keep track of trial-specific information in my analysis pipeline? + link: /faq/is_it_possible_to_keep_track_of_trial-specific_information_in_my_fieldtrip_analysis_pipeline + +- name: How can I compute inter-trial coherence? + link: /faq/itc + +- name: MATLAB complains about a missing or invalid mex file, what should I do? + link: /faq/matlab_complains_about_a_missing_or_invalid_mex_file_what_should_i_do + +- name: MATLAB does not see the functions in the "private" directory + link: /faq/matlab_does_not_see_the_functions_in_the_private_directory + +- name: Replacements for functions from MathWorks toolboxes + link: /faq/matlab_replacements + +- name: What are the MATLAB requirements for using FieldTrip? + link: /faq/matlab_requirements + +- name: MATLAB version 7.3 (2006b) crashes when I try to do ... + link: /faq/matlab_version_7.3_2006b_crashes_when_i_try_to_do + +- name: MATLAB complains that mexmaci64 cannot be opened because the developer cannot be verified + link: /faq/mexmaci64_cannot_be_opened_because_the_developer_cannot_be_verified + +- name: How does MTMCONVOL work? + link: /faq/mtmconvol + +- name: My MRI is upside down, is this a problem? + link: /faq/my_mri_is_upside_down_is_this_a_problem + +- name: Where can I find open access MEG/EEG data? + link: /faq/open_data + +- name: Reading is slow, can I write my raw data to a more efficient file format? + link: /faq/reading_is_slow_can_i_write_my_raw_data_to_a_more_efficient_file_format + +- name: How can I rename channels in my data structure? + link: /faq/rename_channels + +- name: What are the MATLAB and external requirements? + link: /faq/requirements + +- name: Do I need to resample my data, and if so, how is this to be done? + link: /faq/resampling_lowpassfilter + +- name: Should I rereference prior to or after ICA for artifact removal? + link: /faq/should_I_rereference_prior_to_or_after_ica_for_artifact_removal + +- name: Should I use t or F values for cluster-based permutation tests? + link: /faq/should_I_use_t_or_F_values_for_cluster-based_permutation_tests + +- name: Is it OK for vertices/dipoles to stick out of the volume conductor? + link: /faq/sticking_out + +- name: Should I use a Polhemus or a Structure Sensor to record electrode positions? + link: /faq/structuresensor + +- name: The databrowser crashes and destroys the whole MATLAB session, how can I resolve this? + link: /faq/the_databrowser_crashes_and_destroys_the_whole_matlab_session_how_can_i_resolve_this + +- name: What is meant by time-frequency trade off? + link: /faq/timefreqtradeoff + +- name: How can I check or decipher the sequence of triggers in my data? + link: /faq/triggers + +- name: What are the units of the data and of the derived results? + link: /faq/units + +- name: Are the FieldTrip lectures available on video? + link: /faq/video + +- name: What are the differences between the old and the new implementation of 'mtmconvol' in ft_freqanalyis? + link: /faq/what_are_the_differences_between_the_old_and_the_new_implementation_of_mtmconvol_in_ft_freqanalyis + +- name: What are the differences between the old and the new implementation of 'mtmftt' in ft_freqanalyis? + link: /faq/what_are_the_differences_between_the_old_and_the_new_implementation_of_mtmfft_in_ft_freqanalyis + +- name: What are the differences between the old and the new implementation of 'wavelet' (formerly 'wltconvol') in ft_freqanalyis? + link: /faq/what_are_the_differences_between_the_old_and_the_new_implementation_of_wavelet_formerly_wltconvol_in_ft_freqanalyis + +- name: What are the different approaches I can take for distributed computing? + link: /faq/what_are_the_different_approaches_i_can_take_for_distributed_computing + +- name: What are the different Neuromag/Elekta/Megin and Yokogawa layouts good for? + link: /faq/what_are_the_different_neuromag_and_yokogawa_layouts_good_for + +- name: What convention is used to define absolute phase in 'mtmconvol', 'wavelet' and 'mtmfft'? + link: /faq/what_convention_is_used_to_define_absolute_phase_in_mtmconvol_wavelet_and_mtmfft + +- name: What does a typical call to a FieldTrip function look like? + link: /faq/what_does_a_typical_call_to_a_fieldtrip_function_look_like + +- name: What does "padding not sufficient for requested frequency resolution" mean? + link: /faq/what_does_padding_not_sufficient_for_requested_frequency_resolution_mean + +- name: What is a good way to save images for later processing in other software? + link: /faq/what_is_a_good_way_to_save_images_for_later_processing_in_other_software + +- name: What is the conductivity of the brain, CSF, skull and skin tissue? + link: /faq/what_is_the_conductivity_of_the_brain_csf_skull_and_skin_tissue + +- name: What is the difference between coherence and coherency? + link: /faq/what_is_the_difference_between_coherence_and_coherency + +- name: What is the format of the layout file which is used for plotting? + link: /faq/what_is_the_format_of_the_layout_file_which_is_used_for_plotting + +- name: What is the idea behind statistical inference at the second-level? + link: /faq/what_is_the_idea_behind_statistical_inference_at_the_second-level + +- name: What is the plotting convention for anatomical MRIs? + link: /faq/what_is_the_plotting_convention_for_anatomical_mris + +- name: What is the relation between "events" (such as triggers) and "trials"? + link: /faq/what_is_the_relation_between_events_such_as_triggers_and_trials + +- name: What kind of filters can I apply to my data? + link: /faq/what_kind_of_filters_can_i_apply_to_my_data + +- name: What kind of volume conduction models of the head (head models) are implemented? + link: /faq/what_kind_of_volume_conduction_models_are_implemented + +- name: Where can I find the dipoli command-line executable? + link: /faq/where_can_i_find_the_dipoli_command-line_executable + +- name: Which version of FieldTrip should I download? + link: /faq/which_version_of_fieldtrip_should_i_download + +- name: Why am I not allowed to post to the discussion list? + link: /faq/why_am_i_not_allowed_to_post_to_the_discussion_list + +- name: Why am I not getting integer frequencies? + link: /faq/why_am_i_not_getting_exact_integer_frequencies + +- name: Why am I not receiving emails from the discussion list? + link: /faq/why_am_i_not_receiving_emails_from_the_discussion_list + +- name: Why am I receiving warnings about too many bouncing emails? + link: /faq/why_am_i_receiving_warnings_about_too_many_bouncing_emails + +- name: Why are so many of the interesting functions in the private directories? + link: /faq/why_are_so_many_of_the_interesting_functions_in_the_private_directories + +- name: Why are the fileio functions stateless, does the fseek not make them very slow? + link: /faq/why_are_the_fileio_functions_stateless_does_the_fseek_not_make_them_very_slow + +- name: Why are there multiple neighbour templates for the Neuromag306 system? + link: /faq/why_are_there_multiple_neighbour_templates_for_the_neuromag306_system + +- name: Why does my anatomical MRI show upside-down when plotting it with ft_sourceplot? + link: /faq/why_does_my_anatomical_mri_show_upside-down_when_plotting_it_with_ft_sourceplot + +- name: Why does my EEG headmodel look funny? + link: /faq/why_does_my_eegheadmodel_look_funny + +- name: Why does my ICA output contain complex numbers? + link: /faq/why_does_my_ica_output_contain_complex_numbers + +- name: Why does my output.freq not match my cfg.foi when using 'mtmconvol' in ft_freqanalyis? + link: /faq/why_does_my_output.freq_not_match_my_cfg.foi_when_using_mtmconvol_in_ft_freqanalyis + +- name: Why does my output.freq not match my cfg.foi when using 'mtmfft' in ft_freqanalyis + link: /faq/why_does_my_output.freq_not_match_my_cfg.foi_when_using_mtmfft_in_ft_freqanalyis + +- name: Why does my output.freq not match my cfg.foi when using 'wavelet' (formerly 'wltconvol') in ft_freqanalyis? + link: /faq/why_does_my_output.freq_not_match_my_cfg.foi_when_using_wavelet_formerly_wltconvol_in_ft_freqanalyis + +- name: Why does my TFR contain NaNs? + link: /faq/why_does_my_tfr_contain_nans + +- name: Why does my TFR look strange (part I, demeaning)? + link: /faq/why_does_my_tfr_look_strange + +- name: Why does my TFR look strange (part II, detrending)? + link: /faq/why_does_my_tfr_look_strange_part_ii + +- name: Why is FieldTrip developed separately from EEGLAB? + link: /faq/why_is_fieldtrip_developed_separately_from_eeglab + +- name: Why was FieldTrip maintained in SVN and not in Git? + link: /faq/why_is_fieldtrip_maintained_in_svn_and_not_in_git + +- name: Why is my message rejected from the email discussion list? + link: /faq/why_is_my_message_rejected_from_the_email_discussion_list + +- name: Why is the source model deformed or incorrectly aligned after warping template? + link: /faq/why_is_the_source_model_deformed_or_incorrectly_aligned_after_warping_template + +- name: Why is there a residual 50Hz line-noise component after applying a DFT filter? + link: /faq/why_is_there_a_residual_50hz_line-noise_component_after_applying_a_dft_filter + +- name: Why is there a rim around the brain for which the source reconstruction is not computed? + link: /faq/why_is_there_a_rim_around_the_brain_for_which_the_source_reconstruction_is_not_computed + +- name: Why is the largest peak in the spectrum at the frequency which is 1/segment length? + link: /faq/why_largest_peak_spectrum + +- name: Why should I use an average reference for EEG source reconstruction? + link: /faq/why_should_i_use_an_average_reference_for_eeg_source_reconstruction + +- name: Why should I use the cfg.correcttail option when using statistics_montecarlo? + link: /faq/why_should_i_use_the_cfg.correcttail_option_when_using_statistics_montecarlo + diff --git a/_data/category/getting_started.yml b/_data/category/getting_started.yml new file mode 100644 index 000000000..44ed9e5cb --- /dev/null +++ b/_data/category/getting_started.yml @@ -0,0 +1,159 @@ +- name: Getting Started + link: /getting_started + +- name: Getting started with 20%, 10% and 5% electrode arrangements + link: /getting_started/1020 + +- name: Getting started with animal electrophysiology data, including spikes + link: /getting_started/animal + +- name: Getting started with ANT-Neuro, ASA and EEProbe data + link: /getting_started/antneuro + +- name: Getting started with AnyWave + link: /getting_started/anywave + +- name: Getting started with Artinis NIRS data + link: /getting_started/artinis + +- name: Getting started with audio data + link: /getting_started/audio + +- name: Getting started with ABM's B-Alert EEG data + link: /getting_started/b_alert + +- name: Getting started with BabySQUID data + link: /getting_started/babysquid + +- name: Getting started with BESA data + link: /getting_started/besa + +- name: Getting started with BIDS + link: /getting_started/bids + +- name: Getting started with BioImage Suite + link: /getting_started/bioimage + +- name: Getting started with Biosemi BDF data + link: /getting_started/biosemi + +- name: Getting started with Blackrock data + link: /getting_started/blackrock + +- name: Getting started with BrainVision Analyzer and Easycap + link: /getting_started/brainvision + +- name: Getting started with BTi/4D data + link: /getting_started/bti + +- name: Getting started with Cerca OPM data + link: /getting_started/cerca + +- name: Getting started with CTF data + link: /getting_started/ctf + +- name: Getting started with Cyberkinetics data + link: /getting_started/cyberkinetics + +- name: Getting started with EDF (European Data Format) data + link: /getting_started/edf + +- name: Getting started with EEGLAB + link: /getting_started/eeglab + +- name: Getting started with EGI/Philips/Magstim data + link: /getting_started/egi + +- name: Getting started with SR-Research EyeLink eye-tracker data + link: /getting_started/eyelink + +- name: Getting started with FieldLine OPM data + link: /getting_started/fieldline + +- name: Getting started with fMRI timeseries data + link: /getting_started/fmri + +- name: Getting started with Hitachi NIRS data + link: /getting_started/hitachi + +- name: Getting started with Homer + link: /getting_started/homer + +- name: Getting started with human ECoG data + link: /getting_started/human_ecog + +- name: Getting started with LIMO MEEG + link: /getting_started/limo + +- name: Getting started with LORETA + link: /getting_started/loreta + +- name: Getting started with MeshLab + link: /getting_started/meshlab + +- name: Getting started with MNE(-python) + link: /getting_started/mne + +- name: Getting started with Neuralynx data + link: /getting_started/neuralynx + +- name: Getting started with Neuralynx data recorded at the Donders Institute + link: /getting_started/neuralynx_fcdc + +- name: Getting started with Neuromag/Elekta/Megin data + link: /getting_started/neuromag + +- name: Getting started with Nicolet data + link: /getting_started/nicolet + +- name: Getting started with NIRx NIRS data + link: /getting_started/nirx + +- name: Getting started with Neurodata Without Borders (NWB) data + link: /getting_started/nwb + +- name: Getting started with OPM data recorded at the FIL + link: /getting_started/opm_fil + +- name: Getting started with ParaView + link: /getting_started/paraview + +- name: Getting started with Plexon data + link: /getting_started/plexon + +- name: Getting started with real-time analysis for BCI/neurofeedback + link: /getting_started/realtime + +- name: Getting started with real-time head localization in MEG + link: /getting_started/realtime_headlocalizer + +- name: Getting started with Ricoh data + link: /getting_started/ricoh + +- name: Getting started with Seg3D + link: /getting_started/seg3d + +- name: Getting started with Shimadzu NIRS data + link: /getting_started/shimadzu + +- name: Getting started with SimNIBS + link: /getting_started/simnibs + +- name: Getting started with SNIRF data + link: /getting_started/snirf + +- name: Getting started with SPM + link: /getting_started/spm + +- name: Getting started with TMSi data + link: /getting_started/tmsi + +- name: Getting started with video data + link: /getting_started/video + +- name: Getting started with XSens motion capture data + link: /getting_started/xsens + +- name: Getting started with Yokogawa data + link: /getting_started/yokogawa + diff --git a/_data/category/tutorial.yml b/_data/category/tutorial.yml new file mode 100644 index 000000000..029a0eca7 --- /dev/null +++ b/_data/category/tutorial.yml @@ -0,0 +1,159 @@ +- name: Overview of all tutorials + link: /tutorial + +- name: Introduction on dealing with artifacts + link: /tutorial/artifacts + +- name: Automatic artifact rejection + link: /tutorial/automatic_artifact_rejection + +- name: Localizing oscillatory sources using beamformer techniques + link: /tutorial/beamformer + +- name: Localizing visual gamma and cortico-muscular coherence using DICS + link: /tutorial/beamformingextended + +- name: Cluster-based permutation tests on time-frequency data + link: /tutorial/cluster_permutation_freq + +- name: Cluster-based permutation tests on event-related fields + link: /tutorial/cluster_permutation_timelock + +- name: Analysis of corticomuscular coherence + link: /tutorial/coherence + +- name: Analysis of sensor- and source-level connectivity + link: /tutorial/connectivity + +- name: Extended analysis of sensor- and source-level connectivity + link: /tutorial/connectivityextended + +- name: Preprocessing - Reading continuous EEG and MEG data + link: /tutorial/continuous + +- name: Coregistration of Optically Pumped Magnetometer (OPM) data + link: /tutorial/coregistration_opm + +- name: Speeding up your analysis using distributed computing with parfor + link: /tutorial/distributedcomputing_parfor + +- name: Speeding up your analysis using distributed computing with qsub + link: /tutorial/distributedcomputing_qsub + +- name: Localizing electrodes using a 3D-scanner + link: /tutorial/electrode + +- name: Virtual channel analysis of epilepsy MEG data + link: /tutorial/epilepsy + +- name: Event-related averaging and MEG planar gradient + link: /tutorial/eventrelatedaveraging + +- name: Parametric and non-parametric statistics on event-related fields + link: /tutorial/eventrelatedstatistics + +- name: Creating a BEM volume conduction model of the head for source reconstruction of EEG data + link: /tutorial/headmodel_eeg_bem + +- name: Creating a FEM volume conduction model of the head for source reconstruction of EEG data + link: /tutorial/headmodel_eeg_fem + +- name: Creating a volume conduction model of the head for source reconstruction of MEG data + link: /tutorial/headmodel_meg + +- name: Analysis of human ECoG and sEEG recordings + link: /tutorial/human_ecog + +- name: Cleaning artifacts using ICA + link: /tutorial/ica_artifact_cleaning + +- name: Introduction to the FieldTrip toolbox + link: /tutorial/introduction + +- name: Specifying the channel layout for plotting + link: /tutorial/layout + +- name: Making a memory efficient analysis pipeline + link: /tutorial/memory + +- name: Source reconstruction of event-related fields using minimum-norm estimation + link: /tutorial/minimumnormestimate + +- name: Analysis of monkey ECoG recordings + link: /tutorial/monkey_ecog + +- name: Channel and source analysis of mouse EEG + link: /tutorial/mouse_eeg + +- name: Classification of event-related MEG data using MVPA-Light + link: /tutorial/mvpa_light + +- name: Whole brain connectivity and network analysis + link: /tutorial/networkanalysis + +- name: Whole brain connectivity and network analysis + link: /tutorial/networkanalysis_eeg + +- name: Whole brain connectivity and network analysis + link: /tutorial/networkanalysis_old + +- name: Preprocessing and averaging of multi-channel NIRS data + link: /tutorial/nirs_multichannel + +- name: Preprocessing and averaging of single-channel NIRS data + link: /tutorial/nirs_singlechannel + +- name: Plotting data at the channel and source level + link: /tutorial/plotting + +- name: Preprocessing - Segmenting and reading trial-based EEG and MEG data + link: /tutorial/preprocessing + +- name: Preprocessing of EEG data and computing ERPs + link: /tutorial/preprocessing_erp + +- name: Preprocessing of Optically Pumped Magnetometer (OPM) data + link: /tutorial/preprocessing_opm + +- name: Creating a clean analysis pipeline + link: /tutorial/scripting + +- name: Sensor-level ERF, TFR and connectivity analyses + link: /tutorial/sensor_analysis + +- name: Extracting the brain state and events from continuous sleep EEG + link: /tutorial/sleep + +- name: Creating a source model for source reconstruction of MEG or EEG data + link: /tutorial/sourcemodel + +- name: Preprocessing and analysis of spike-train data + link: /tutorial/spike + +- name: Preprocessing and analysis of spike and local field potential data + link: /tutorial/spikefield + +- name: Time-frequency analysis using Hanning window, multitapers and wavelets + link: /tutorial/timefrequencyanalysis + +- name: Dealing with TMS-EEG datasets + link: /tutorial/tms-eeg + +- name: Visual or manual artifact rejection + link: /tutorial/visual_artifact_rejection + +- name: Beamforming oscillatory responses in combined MEG/EEG data + link: /workshop/natmeg2014/beamforming + +- name: Dipole fitting of combined MEG/EEG data + link: /workshop/natmeg2014/dipolefitting + +- name: Preprocessing and event-related activity in combined MEG/EEG data + link: /workshop/natmeg2014/preprocessing + +- name: Statistical analysis and multiple comparison correction for combined MEG/EEG data + link: /workshop/natmeg2014/statistics + +- name: Time-frequency analysis of combined MEG/EEG data + link: /workshop/natmeg2014/timefrequency + diff --git a/_includes/category b/_includes/category new file mode 100644 index 000000000..de97b868b --- /dev/null +++ b/_includes/category @@ -0,0 +1,7 @@ +{% if page.category != nill and page.category != "" %} +

+ Category: {{ page.category }} +

+{% else %} +   +{% endif %} diff --git a/_includes/right b/_includes/right index 21d207519..e658d9233 100644 --- a/_includes/right +++ b/_includes/right @@ -4,6 +4,8 @@ {{ content | toc_only }} {% endif %} +{% include category %} + {% include tags %} diff --git a/_includes/tags b/_includes/tags index eb51ffbbb..148de8a38 100644 --- a/_includes/tags +++ b/_includes/tags @@ -1,8 +1,10 @@ {% if page.tags != nill and page.tags != "" %} +

Tags: {% for t in page.tags %} {{ t }} {% endfor %} +

{% else %}   {% endif %} diff --git a/_layouts/category.html b/_layouts/category.html new file mode 100644 index 000000000..b8af9ec9b --- /dev/null +++ b/_layouts/category.html @@ -0,0 +1,39 @@ + + + + {% include head %} + {% include favicon %} + {% include plausible %} + + + + {% include navigation %} + +
+
+ +
+ {% include left %} +
+
+

Pages in the category "{{ page.category }}"

+ {% if site.data.category[page.category] != nill %} +
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+ {% endif %} +
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+ {% include right %} +
+
+
+ + {% include footer %} + + diff --git a/_scripts/categories.sh b/_scripts/categories.sh new file mode 100755 index 000000000..ad9c15a0f --- /dev/null +++ b/_scripts/categories.sh @@ -0,0 +1,38 @@ +#!/bin/bash +# +# This script parses all pages for categories and creates an overview page for each category. +# It results in an update of _data/category/*.yml and of category/*.md +# +# Following execution of this script, you should commmit the category pages that have +# been changed. + +if [[ ! -e _config.yml ]] ; then echo ERROR this should be executed in the toplevel directory ; exit 1 ; fi + +# these will be recreated +rm category/*.md +rm _data/category/*.yml + +CATEGORYFILE=`mktemp` + +# this constructs a list of all categories +find . -name \*.md | xargs grep -h '^category:' | cut -d : -f 2 | tr -d '[] ' | tr , '\n' | sort -u > $CATEGORYFILE + +# this constructs a list of pages that belong to a certain category +for CATEGORY in `cat ${CATEGORYFILE}` ; do + FILELIST=`find . -name \*.md | xargs grep -wl ^category:.*${CATEGORY} | sort | uniq ` + for FILE in ${FILELIST}; do + NAME=`grep title: $FILE | cut -d : -f 2 | cut -b 2-` + LINK=${FILE:1:$((${#FILE}-4))} + echo '- name: ' $NAME >> _data/category/$CATEGORY.yml + echo ' link: ' $LINK >> _data/category/$CATEGORY.yml + echo '' >> _data/category/$CATEGORY.yml + done +done + +# this constructs an overview page for each category +for CATEGORY in `cat ${CATEGORYFILE}` ; do + echo '---' > category/$CATEGORY.md + echo layout: category >> category/$CATEGORY.md + echo category: $CATEGORY >> category/$CATEGORY.md + echo '---' >> category/$CATEGORY.md +done diff --git a/_scripts/tags.sh b/_scripts/tags.sh index 168dd259d..bbc140d00 100755 --- a/_scripts/tags.sh +++ b/_scripts/tags.sh @@ -17,14 +17,6 @@ TAGFILE=`mktemp` # this constructs a list of all tags find . -name \*.md | xargs grep -h '^tags:' | cut -d : -f 2 | tr -d '[] ' | tr , '\n' | sort -u > $TAGFILE -# this constructs an overview page for each tag -for TAG in `cat ${TAGFILE}` ; do - echo '---' > tag/$TAG.md - echo layout: tag >> tag/$TAG.md - echo tag: $TAG >> tag/$TAG.md - echo '---' >> tag/$TAG.md -done - # this constructs a list of pages that have a certain tag for TAG in `cat ${TAGFILE}` ; do FILELIST=`find . -name \*.md | xargs grep -wl ^tags:.*${TAG} | sort | uniq ` @@ -36,3 +28,11 @@ for TAG in `cat ${TAGFILE}` ; do echo '' >> _data/tag/$TAG.yml done done + +# this constructs an overview page for each tag +for TAG in `cat ${TAGFILE}` ; do + echo '---' > tag/$TAG.md + echo layout: tag >> tag/$TAG.md + echo tag: $TAG >> tag/$TAG.md + echo '---' >> tag/$TAG.md +done diff --git a/category/example.md b/category/example.md new file mode 100644 index 000000000..7032c1e2c --- /dev/null +++ b/category/example.md @@ -0,0 +1,4 @@ +--- +layout: category +category: example +--- diff --git a/category/faq.md b/category/faq.md new file mode 100644 index 000000000..127701d1f --- /dev/null +++ b/category/faq.md @@ -0,0 +1,4 @@ +--- +layout: category +category: faq +--- diff --git a/category/getting_started.md b/category/getting_started.md new file mode 100644 index 000000000..ea4aa3a21 --- /dev/null +++ b/category/getting_started.md @@ -0,0 +1,4 @@ +--- +layout: category +category: getting_started +--- diff --git a/category/tutorial.md b/category/tutorial.md new file mode 100644 index 000000000..e5d0f06f7 --- /dev/null +++ b/category/tutorial.md @@ -0,0 +1,4 @@ +--- +layout: category +category: tutorial +--- diff --git a/example.md b/example.md index 4af20c9f1..e25ae896f 100644 --- a/example.md +++ b/example.md @@ -1,6 +1,6 @@ --- title: Example MATLAB scripts -tags: [example] +category: example --- # Example MATLAB scripts diff --git a/faq.md b/faq.md index 1bd672f04..89ee2bdb0 100644 --- a/faq.md +++ b/faq.md @@ -1,6 +1,6 @@ --- title: Frequently Asked Questions -tags: [faq] +category: faq --- # Frequently Asked Questions diff --git a/getting_started.md b/getting_started.md index 0f11394d9..169b7cb70 100644 --- a/getting_started.md +++ b/getting_started.md @@ -1,5 +1,6 @@ --- title: Getting Started +category: getting_started --- # Getting Started diff --git a/tutorial.md b/tutorial.md index 93c9e7c86..759241054 100644 --- a/tutorial.md +++ b/tutorial.md @@ -1,6 +1,6 @@ --- title: Overview of all tutorials -tags: [tutorial] +category: tutorial --- # Overview of all tutorials