From 55edfb38ad4c816945e001e090411a8a1c3f2f11 Mon Sep 17 00:00:00 2001 From: Robert Oostenveld Date: Mon, 9 Dec 2024 14:47:47 +0100 Subject: [PATCH] updated tags --- _data/tag/artifact.yml | 6 +++--- _data/tag/cluster.yml | 8 +++---- _data/tag/coherence.yml | 4 ++-- _data/tag/connectivity.yml | 2 +- _data/tag/ct.yml | 6 +++--- _data/tag/ctf.yml | 2 +- _data/tag/dataformat.yml | 2 +- _data/tag/dipole.yml | 18 ++++++++-------- _data/tag/eeg.yml | 34 +++++++++++++++--------------- _data/tag/emg.yml | 2 +- _data/tag/filter.yml | 2 +- _data/tag/fixme.yml | 2 +- _data/tag/fmri.yml | 2 +- _data/tag/freq.yml | 24 ++++++++++----------- _data/tag/granger.yml | 2 +- _data/tag/headmodel.yml | 20 +++++++++--------- _data/tag/ica.yml | 6 +++--- _data/tag/literature.yml | 4 ++-- _data/tag/meg-removal.yml | 6 +++--- _data/tag/meg.yml | 42 ++++++++++++++++++------------------- _data/tag/mri.yml | 12 +++++------ _data/tag/preprocessing.yml | 18 ++++++++-------- _data/tag/raw.yml | 4 ++-- _data/tag/realtime.yml | 2 +- _data/tag/simulation.yml | 10 ++++----- _data/tag/source.yml | 42 ++++++++++++++++++------------------- _data/tag/statistics.yml | 16 +++++++------- _data/tag/trialdef.yml | 2 +- _data/tag/trialfun.yml | 2 +- 29 files changed, 151 insertions(+), 151 deletions(-) diff --git a/_data/tag/artifact.yml b/_data/tag/artifact.yml index 9d1206b05..efffbd4d7 100644 --- a/_data/tag/artifact.yml +++ b/_data/tag/artifact.yml @@ -1,3 +1,6 @@ +- name: Use denoising source separation (DSS) to remove ECG artifacts + link: /example/dss_ecg + - name: How to incorporate head movements in MEG analysis link: /example/headmovement_meg @@ -10,9 +13,6 @@ - name: Combine MEG with Eyelink eyetracker data link: /example/meg_eyelink -- name: Use denoising source separation (DSS) to remove ECG artifacts - link: /example/use_denoising_source_separation_dss_to_remove_ecg_artifacts - - name: How can I interpret the different types of padding in FieldTrip? link: /faq/artifact_padding diff --git a/_data/tag/cluster.yml b/_data/tag/cluster.yml index d7f15e4d1..bedf58f82 100644 --- a/_data/tag/cluster.yml +++ b/_data/tag/cluster.yml @@ -1,6 +1,3 @@ -- name: Apply non-parametric statistics with clustering on TFRs of power that were computed with BESA - link: /example/apply_clusterrandanalysis_on_tfrs_of_power_that_were_computed_with_besa - - name: Computing and reporting the effect size link: /example/effectsize @@ -11,7 +8,10 @@ link: /example/samplesize - name: Use simulated ERPs to explore cluster statistics - link: /example/use_simulated_erps_to_explore_cluster_statistics + link: /example/simulateddata_clusterstats + +- name: Apply non-parametric statistics with clustering on TFRs of power that were computed with BESA + link: /example/stats_besa - name: Why should I use the cfg.correcttail option when using statistics_montecarlo? link: /faq/clusterstats_correcttail diff --git a/_data/tag/coherence.yml b/_data/tag/coherence.yml index 3b3bb8e12..6169b313e 100644 --- a/_data/tag/coherence.yml +++ b/_data/tag/coherence.yml @@ -2,7 +2,7 @@ link: /example/coherence_snr - name: Correlation analysis of fMRI data - link: /example/correlation_analysis_in_fmri_data + link: /example/fmri_correlationanalysis - name: What is the difference between coherence and coherency? link: /faq/coherence_coherency @@ -17,7 +17,7 @@ link: /faq/phaseslopeindex - name: References to implemented methods - link: /references_to_implemented_methods + link: /references_methods - name: Localizing visual gamma and cortico-muscular coherence using DICS link: /tutorial/beamformingextended diff --git a/_data/tag/connectivity.yml b/_data/tag/connectivity.yml index a4270a2ad..bfd90e06b 100644 --- a/_data/tag/connectivity.yml +++ b/_data/tag/connectivity.yml @@ -2,7 +2,7 @@ link: /development/module/connectivity - name: Conditional Granger causality in the frequency domain - link: /example/connectivity_conditional_granger + link: /example/granger_conditional - name: In what way can frequency domain data be represented in FieldTrip? link: /faq/datatype_freq diff --git a/_data/tag/ct.yml b/_data/tag/ct.yml index 7bc84a4e5..cddfa52b0 100644 --- a/_data/tag/ct.yml +++ b/_data/tag/ct.yml @@ -1,3 +1,6 @@ +- name: Use denoising source separation (DSS) to remove ECG artifacts + link: /example/dss_ecg + - name: How to incorporate head movements in MEG analysis link: /example/headmovement_meg @@ -10,9 +13,6 @@ - name: Combine MEG with Eyelink eyetracker data link: /example/meg_eyelink -- name: Use denoising source separation (DSS) to remove ECG artifacts - link: /example/use_denoising_source_separation_dss_to_remove_ecg_artifacts - - name: How can I interpret the different types of padding in FieldTrip? link: /faq/artifact_padding diff --git a/_data/tag/ctf.yml b/_data/tag/ctf.yml index b9340a948..66105a628 100644 --- a/_data/tag/ctf.yml +++ b/_data/tag/ctf.yml @@ -14,7 +14,7 @@ link: /example/megrealign - name: Can I create an artificial CTF dataset using MATLAB? - link: /example/writing_simulated_data_to_a_ctf_dataset + link: /example/simulateddata_ctf - name: How can I convert an anatomical MRI from DICOM into CTF format? link: /faq/anat_dicom2ctf diff --git a/_data/tag/dataformat.yml b/_data/tag/dataformat.yml index 790929aa7..f5a6a5c8e 100644 --- a/_data/tag/dataformat.yml +++ b/_data/tag/dataformat.yml @@ -8,7 +8,7 @@ link: /example/biosemi - name: Can I create an artificial CTF dataset using MATLAB? - link: /example/writing_simulated_data_to_a_ctf_dataset + link: /example/simulateddata_ctf - name: How can I convert an anatomical MRI from DICOM into CTF format? link: /faq/anat_dicom2ctf diff --git a/_data/tag/dipole.yml b/_data/tag/dipole.yml index c3e7409bb..f4a2a4f62 100644 --- a/_data/tag/dipole.yml +++ b/_data/tag/dipole.yml @@ -1,18 +1,18 @@ -- name: Compute forward simulated data using ft_dipolesimulation - link: /example/compute_forward_simulated_data - -- name: Compute forward simulated data and apply a beamformer scan - link: /example/compute_forward_simulated_data_and_apply_a_beamformer_scan - -- name: Compute forward simulated data and apply a dipole fit - link: /example/compute_forward_simulated_data_and_apply_a_dipole_fit - - name: Compute forward simulated data with the low-level ft_compute_leadfield link: /example/compute_leadfield - name: Fit a dipole to the tactile ERF after mechanical stimulation link: /example/dipolefit_somatosensory_erf +- name: Compute forward simulated data using ft_dipolesimulation + link: /example/simulateddata + +- name: Compute forward simulated data and apply a beamformer scan + link: /example/simulateddata_beamformer + +- name: Compute forward simulated data and apply a dipole fit + link: /example/simulateddata_dipolefit + - name: Dipole fitting of combined MEG/EEG data link: /workshop/natmeg2014/dipolefitting diff --git a/_data/tag/eeg.yml b/_data/tag/eeg.yml index ead58a5ad..43499b193 100644 --- a/_data/tag/eeg.yml +++ b/_data/tag/eeg.yml @@ -1,17 +1,14 @@ - name: Streaming realtime data from Modular EEG (aka OpenEEG) link: /development/realtime/modulareeg -- name: Example analysis pipeline for Biosemi data - link: /example/biosemi - -- name: Combined EEG and MEG source reconstruction - link: /example/combined_eeg_and_meg_source_reconstruction +- name: Use your own forward leadfield model in an inverse beamformer computation + link: /example/beamformer_ownforward -- name: Compute forward simulated data using ft_dipolesimulation - link: /example/compute_forward_simulated_data +- name: Testing BEM created EEG lead fields + link: /example/bem_evaluation -- name: Compute forward simulated data and apply a dipole fit - link: /example/compute_forward_simulated_data_and_apply_a_dipole_fit +- name: Example analysis pipeline for Biosemi data + link: /example/biosemi - name: Compute forward simulated data with the low-level ft_compute_leadfield link: /example/compute_leadfield @@ -25,23 +22,26 @@ - name: Compute EEG leadfields using a FEM headmodel link: /example/fem -- name: Getting started with reading raw EEG or MEG data - link: /example/getting_started_with_reading_raw_eeg_or_meg_data - - name: Using General Linear Modeling on time series data link: /example/glm_timeseries - name: Using General Linear Modeling over trials link: /example/glm_trials +- name: Getting started with reading raw EEG or MEG data + link: /example/raw_meeg + - name: Re-reference EEG and iEEG data link: /example/rereference -- name: Testing BEM created EEG lead fields - link: /example/testing_bem_created_leadfields +- name: Compute forward simulated data using ft_dipolesimulation + link: /example/simulateddata -- name: Use your own forward leadfield model in an inverse beamformer computation - link: /example/use_your_own_forward_leadfield_model_in_an_inverse_beamformer_computation +- name: Compute forward simulated data and apply a dipole fit + link: /example/simulateddata_dipolefit + +- name: Combined EEG and MEG source reconstruction + link: /example/sourcerecon_meeg - name: Making a synchronous movie of EEG or NIRS combined with video recordings link: /example/video_eeg @@ -128,7 +128,7 @@ link: /reading_data - name: References to implemented methods - link: /references_to_implemented_methods + link: /references_methods - name: Template 2-D layouts for plotting link: /template/layout diff --git a/_data/tag/emg.yml b/_data/tag/emg.yml index dae9d1599..c080a7bfe 100644 --- a/_data/tag/emg.yml +++ b/_data/tag/emg.yml @@ -2,7 +2,7 @@ link: /example/bids_emg - name: Detect the muscle activity in an EMG channel and use that as trial definition - link: /example/detect_the_muscle_activity_in_an_emg_channel_and_use_that_as_trial_definition + link: /example/trialdef_emg - name: Analysis of corticomuscular coherence link: /tutorial/coherence diff --git a/_data/tag/filter.yml b/_data/tag/filter.yml index eedeb674e..2562a28db 100644 --- a/_data/tag/filter.yml +++ b/_data/tag/filter.yml @@ -1,5 +1,5 @@ - name: Determine the filter characteristics - link: /example/determine_the_filter_characteristics + link: /example/filter_characteristics - name: How can I interpret the different types of padding in FieldTrip? link: /faq/artifact_padding diff --git a/_data/tag/fixme.yml b/_data/tag/fixme.yml index 6a55c95ee..b970e64c7 100644 --- a/_data/tag/fixme.yml +++ b/_data/tag/fixme.yml @@ -2,7 +2,7 @@ link: /development/guideline/code - name: Common filters in beamforming - link: /example/common_filters_in_beamforming + link: /example/beamformer_commonfilter - name: Fit a dipole to the tactile ERF after mechanical stimulation link: /example/dipolefit_somatosensory_erf diff --git a/_data/tag/fmri.yml b/_data/tag/fmri.yml index d05b5d1c2..41de2e6cd 100644 --- a/_data/tag/fmri.yml +++ b/_data/tag/fmri.yml @@ -2,7 +2,7 @@ link: /development/realtime/fmri - name: Correlation analysis of fMRI data - link: /example/correlation_analysis_in_fmri_data + link: /example/fmri_correlationanalysis - name: Getting started with fMRI timeseries data link: /getting_started/fmri diff --git a/_data/tag/freq.yml b/_data/tag/freq.yml index d74d50195..dc4e1ff0e 100644 --- a/_data/tag/freq.yml +++ b/_data/tag/freq.yml @@ -1,30 +1,30 @@ -- name: Apply non-parametric statistics with clustering on TFRs of power that were computed with BESA - link: /example/apply_clusterrandanalysis_on_tfrs_of_power_that_were_computed_with_besa +- name: Common filters in beamforming + link: /example/beamformer_commonfilter - name: Effect of SNR on Coherence link: /example/coherence_snr -- name: Common filters in beamforming - link: /example/common_filters_in_beamforming - -- name: Conditional Granger causality in the frequency domain - link: /example/connectivity_conditional_granger - -- name: Correlation analysis of fMRI data - link: /example/correlation_analysis_in_fmri_data - - name: Cross-frequency analysis link: /example/crossfreq - name: Effects of tapering for power estimates link: /example/effects_of_tapering +- name: Correlation analysis of fMRI data + link: /example/fmri_correlationanalysis + +- name: Conditional Granger causality in the frequency domain + link: /example/granger_conditional + - name: Simulate an oscillatory signal with phase resetting link: /example/phase_reset - name: Analyze Steady-State Visual Evoked Potentials (SSVEPs) link: /example/ssvep +- name: Apply non-parametric statistics with clustering on TFRs of power that were computed with BESA + link: /example/stats_besa + - name: How can I test whether a behavioral measure is phasic? link: /faq/behavior_cosinefit @@ -89,7 +89,7 @@ link: /reference - name: References to implemented methods - link: /references_to_implemented_methods + link: /references_methods - name: Localizing oscillatory sources using beamformer techniques link: /tutorial/beamformer diff --git a/_data/tag/granger.yml b/_data/tag/granger.yml index f681a5979..a8b775d57 100644 --- a/_data/tag/granger.yml +++ b/_data/tag/granger.yml @@ -1,5 +1,5 @@ - name: Conditional Granger causality in the frequency domain - link: /example/connectivity_conditional_granger + link: /example/granger_conditional - name: Analysis of sensor- and source-level connectivity link: /tutorial/connectivity diff --git a/_data/tag/headmodel.yml b/_data/tag/headmodel.yml index 1744082dd..2135d6a24 100644 --- a/_data/tag/headmodel.yml +++ b/_data/tag/headmodel.yml @@ -1,8 +1,5 @@ -- name: Combined EEG and MEG source reconstruction - link: /example/combined_eeg_and_meg_source_reconstruction - -- name: Compute forward simulated data using ft_dipolesimulation - link: /example/compute_forward_simulated_data +- name: Testing BEM created EEG lead fields + link: /example/bem_evaluation - name: Compute forward simulated data with the low-level ft_compute_leadfield link: /example/compute_leadfield @@ -14,17 +11,20 @@ link: /example/fem - name: Make MEG leadfields using different headmodels - link: /example/make_leadfields_using_different_headmodels + link: /example/headmodel_various + +- name: Compute forward simulated data using ft_dipolesimulation + link: /example/simulateddata - name: Create MNI-aligned grids in individual head-space link: /example/sourcemodel_aligned2mni +- name: Combined EEG and MEG source reconstruction + link: /example/sourcerecon_meeg + - name: Fitting a template MRI to the MEG Polhemus head shape link: /example/sphere_fitting -- name: Testing BEM created EEG lead fields - link: /example/testing_bem_created_leadfields - - name: How to coregister an anatomical MRI with the gradiometer or electrode positions? link: /faq/anat_coreg @@ -83,7 +83,7 @@ link: /reference - name: References to implemented methods - link: /references_to_implemented_methods + link: /references_methods - name: Template head models for EEG volume conduction modeling link: /template/headmodel diff --git a/_data/tag/ica.yml b/_data/tag/ica.yml index b2712137d..c8379bcac 100644 --- a/_data/tag/ica.yml +++ b/_data/tag/ica.yml @@ -1,12 +1,12 @@ +- name: Use denoising source separation (DSS) to remove ECG artifacts + link: /example/dss_ecg + - name: Independent component analysis (ICA) to remove ECG artifacts link: /example/ica_ecg - name: Independent component analysis (ICA) to remove EOG artifacts link: /example/ica_eog -- name: Use denoising source separation (DSS) to remove ECG artifacts - link: /example/use_denoising_source_separation_dss_to_remove_ecg_artifacts - - name: The databrowser crashes and destroys the whole MATLAB session, how can I resolve this? link: /faq/databrowser_crash diff --git a/_data/tag/literature.yml b/_data/tag/literature.yml index 92e97cc3e..3b71e8327 100644 --- a/_data/tag/literature.yml +++ b/_data/tag/literature.yml @@ -5,8 +5,8 @@ link: /citations - name: References to implemented methods - link: /references_to_implemented_methods + link: /references_methods - name: References to review papers and teaching material - link: /references_to_review_papers_and_teaching_material + link: /references_papers diff --git a/_data/tag/meg-removal.yml b/_data/tag/meg-removal.yml index c5b686260..f384cf94f 100644 --- a/_data/tag/meg-removal.yml +++ b/_data/tag/meg-removal.yml @@ -1,9 +1,9 @@ +- name: Use denoising source separation (DSS) to remove ECG artifacts + link: /example/dss_ecg + - name: Independent component analysis (ICA) to remove ECG artifacts link: /example/ica_ecg -- name: Use denoising source separation (DSS) to remove ECG artifacts - link: /example/use_denoising_source_separation_dss_to_remove_ecg_artifacts - - name: Which datasets are used in the documentation and where are they used? link: /faq/datasets diff --git a/_data/tag/meg.yml b/_data/tag/meg.yml index 3b4dd3f02..9beb00c14 100644 --- a/_data/tag/meg.yml +++ b/_data/tag/meg.yml @@ -1,29 +1,26 @@ - name: MEG dataformats link: /dataformat/meg -- name: Converting an example MEG dataset for sharing in BIDS - link: /example/bids_meg - -- name: Combined EEG and MEG source reconstruction - link: /example/combined_eeg_and_meg_source_reconstruction - - name: Common filters in beamforming - link: /example/common_filters_in_beamforming + link: /example/beamformer_commonfilter -- name: Compute forward simulated data and apply a beamformer scan - link: /example/compute_forward_simulated_data_and_apply_a_beamformer_scan +- name: Converting an example MEG dataset for sharing in BIDS + link: /example/bids_meg - name: Fit a dipole to the tactile ERF after mechanical stimulation link: /example/dipolefit_somatosensory_erf +- name: Use denoising source separation (DSS) to remove ECG artifacts + link: /example/dss_ecg + - name: Computing and reporting the effect size link: /example/effectsize - name: Fixing a missing channel link: /example/fixing_a_missing_sensor -- name: Getting started with reading raw EEG or MEG data - link: /example/getting_started_with_reading_raw_eeg_or_meg_data +- name: Make MEG leadfields using different headmodels + link: /example/headmodel_various - name: How to incorporate head movements in MEG analysis link: /example/headmovement_meg @@ -34,27 +31,30 @@ - name: Independent component analysis (ICA) to remove EOG artifacts link: /example/ica_eog -- name: Make MEG leadfields using different headmodels - link: /example/make_leadfields_using_different_headmodels - - name: Interpolating data from the CTF151 to the CTF275 sensor array using megrealign link: /example/megrealign +- name: Getting started with reading raw EEG or MEG data + link: /example/raw_meeg + +- name: Compute forward simulated data and apply a beamformer scan + link: /example/simulateddata_beamformer + +- name: Can I create an artificial CTF dataset using MATLAB? + link: /example/simulateddata_ctf + - name: Source statistics link: /example/source_statistics - name: Create MNI-aligned grids in individual head-space link: /example/sourcemodel_aligned2mni +- name: Combined EEG and MEG source reconstruction + link: /example/sourcerecon_meeg + - name: Fitting a template MRI to the MEG Polhemus head shape link: /example/sphere_fitting -- name: Use denoising source separation (DSS) to remove ECG artifacts - link: /example/use_denoising_source_separation_dss_to_remove_ecg_artifacts - -- name: Can I create an artificial CTF dataset using MATLAB? - link: /example/writing_simulated_data_to_a_ctf_dataset - - name: How to coregister an anatomical MRI with the gradiometer or electrode positions? link: /faq/anat_coreg @@ -125,7 +125,7 @@ link: /reading_data - name: References to implemented methods - link: /references_to_implemented_methods + link: /references_methods - name: Template 2-D layouts for plotting link: /template/layout diff --git a/_data/tag/mri.yml b/_data/tag/mri.yml index 7f151cf8c..3a3260f8e 100644 --- a/_data/tag/mri.yml +++ b/_data/tag/mri.yml @@ -1,21 +1,21 @@ - name: Streaming realtime fMRI from Siemens scanners link: /development/realtime/fmri +- name: Testing BEM created EEG lead fields + link: /example/bem_evaluation + - name: Check the quality of the anatomical coregistration link: /example/coregistration_quality_control -- name: Correlation analysis of fMRI data - link: /example/correlation_analysis_in_fmri_data - - name: Align EEG electrode positions to BEM headmodel link: /example/electrodes2bem +- name: Correlation analysis of fMRI data + link: /example/fmri_correlationanalysis + - name: Create MNI-aligned grids in individual head-space link: /example/sourcemodel_aligned2mni -- name: Testing BEM created EEG lead fields - link: /example/testing_bem_created_leadfields - - name: What is the difference between the ACPC, MNI, SPM and TAL coordinate systems? link: /faq/acpc diff --git a/_data/tag/preprocessing.yml b/_data/tag/preprocessing.yml index f23045dbb..901cbb158 100644 --- a/_data/tag/preprocessing.yml +++ b/_data/tag/preprocessing.yml @@ -1,15 +1,12 @@ -- name: Detect the muscle activity in an EMG channel and use that as trial definition - link: /example/detect_the_muscle_activity_in_an_emg_channel_and_use_that_as_trial_definition +- name: Use denoising source separation (DSS) to remove ECG artifacts + link: /example/dss_ecg - name: Determine the filter characteristics - link: /example/determine_the_filter_characteristics + link: /example/filter_characteristics - name: Fixing a missing channel link: /example/fixing_a_missing_sensor -- name: Getting started with reading raw EEG or MEG data - link: /example/getting_started_with_reading_raw_eeg_or_meg_data - - name: Independent component analysis (ICA) to remove ECG artifacts link: /example/ica_ecg @@ -19,15 +16,18 @@ - name: Combine MEG with Eyelink eyetracker data link: /example/meg_eyelink +- name: Getting started with reading raw EEG or MEG data + link: /example/raw_meeg + - name: Re-reference EEG and iEEG data link: /example/rereference +- name: Detect the muscle activity in an EMG channel and use that as trial definition + link: /example/trialdef_emg + - name: Making your own trialfun for conditional trial definition link: /example/trialfun -- name: Use denoising source separation (DSS) to remove ECG artifacts - link: /example/use_denoising_source_separation_dss_to_remove_ecg_artifacts - - name: How can I append the files of two separate recordings? link: /faq/append_files diff --git a/_data/tag/raw.yml b/_data/tag/raw.yml index ff2e4a1da..109f7368b 100644 --- a/_data/tag/raw.yml +++ b/_data/tag/raw.yml @@ -1,8 +1,8 @@ - name: Correlation analysis of fMRI data - link: /example/correlation_analysis_in_fmri_data + link: /example/fmri_correlationanalysis - name: Getting started with reading raw EEG or MEG data - link: /example/getting_started_with_reading_raw_eeg_or_meg_data + link: /example/raw_meeg - name: Making your own trialfun for conditional trial definition link: /example/trialfun diff --git a/_data/tag/realtime.yml b/_data/tag/realtime.yml index 9334fbb5d..7978c4b8f 100644 --- a/_data/tag/realtime.yml +++ b/_data/tag/realtime.yml @@ -128,7 +128,7 @@ link: /example/ft_realtime_signalviewer - name: Measuring the timing delay and jitter for a real-time application - link: /example/measuring_the_timing_delay_and_jitter_for_a_real-time_application + link: /example/realtime_evaluation - name: Does the FieldTrip realtime buffer only work with MATLAB? link: /faq/fieldtripbuffer diff --git a/_data/tag/simulation.yml b/_data/tag/simulation.yml index d33d323fc..a32f85470 100644 --- a/_data/tag/simulation.yml +++ b/_data/tag/simulation.yml @@ -1,5 +1,5 @@ -- name: Compute forward simulated data using ft_dipolesimulation - link: /example/compute_forward_simulated_data +- name: Testing BEM created EEG lead fields + link: /example/bem_evaluation - name: Compute forward simulated data with the low-level ft_compute_leadfield link: /example/compute_leadfield @@ -10,9 +10,9 @@ - name: Using simulations to estimate the sample size for cluster-based permutation test link: /example/samplesize -- name: Testing BEM created EEG lead fields - link: /example/testing_bem_created_leadfields +- name: Compute forward simulated data using ft_dipolesimulation + link: /example/simulateddata - name: Use simulated ERPs to explore cluster statistics - link: /example/use_simulated_erps_to_explore_cluster_statistics + link: /example/simulateddata_clusterstats diff --git a/_data/tag/source.yml b/_data/tag/source.yml index aecc3fbd7..48dac086f 100644 --- a/_data/tag/source.yml +++ b/_data/tag/source.yml @@ -1,17 +1,11 @@ -- name: Combined EEG and MEG source reconstruction - link: /example/combined_eeg_and_meg_source_reconstruction - - name: Common filters in beamforming - link: /example/common_filters_in_beamforming - -- name: Compute forward simulated data using ft_dipolesimulation - link: /example/compute_forward_simulated_data + link: /example/beamformer_commonfilter -- name: Compute forward simulated data and apply a beamformer scan - link: /example/compute_forward_simulated_data_and_apply_a_beamformer_scan +- name: Use your own forward leadfield model in an inverse beamformer computation + link: /example/beamformer_ownforward -- name: Compute forward simulated data and apply a dipole fit - link: /example/compute_forward_simulated_data_and_apply_a_dipole_fit +- name: Testing BEM created EEG lead fields + link: /example/bem_evaluation - name: Compute forward simulated data with the low-level ft_compute_leadfield link: /example/compute_leadfield @@ -31,30 +25,36 @@ - name: How to create a head model if you do not have an individual MRI link: /example/fittemplate +- name: Make MEG leadfields using different headmodels + link: /example/headmodel_various + - name: How to import data from MNE-Python and FreeSurfer link: /example/import_mne -- name: Make MEG leadfields using different headmodels - link: /example/make_leadfields_using_different_headmodels - - name: Plotting the result of source reconstruction on a cortical mesh link: /example/plotting_source_surface +- name: Compute forward simulated data using ft_dipolesimulation + link: /example/simulateddata + +- name: Compute forward simulated data and apply a beamformer scan + link: /example/simulateddata_beamformer + +- name: Compute forward simulated data and apply a dipole fit + link: /example/simulateddata_dipolefit + - name: Source statistics link: /example/source_statistics - name: Create MNI-aligned grids in individual head-space link: /example/sourcemodel_aligned2mni +- name: Combined EEG and MEG source reconstruction + link: /example/sourcerecon_meeg + - name: Symmetric dipole pairs for beamforming link: /example/symmetry -- name: Testing BEM created EEG lead fields - link: /example/testing_bem_created_leadfields - -- name: Use your own forward leadfield model in an inverse beamformer computation - link: /example/use_your_own_forward_leadfield_model_in_an_inverse_beamformer_computation - - name: How to coregister an anatomical MRI with the gradiometer or electrode positions? link: /faq/anat_coreg @@ -110,7 +110,7 @@ link: /reference - name: References to implemented methods - link: /references_to_implemented_methods + link: /references_methods - name: Localizing oscillatory sources using beamformer techniques link: /tutorial/beamformer diff --git a/_data/tag/statistics.yml b/_data/tag/statistics.yml index d27bd1c96..31cb6ff5d 100644 --- a/_data/tag/statistics.yml +++ b/_data/tag/statistics.yml @@ -1,6 +1,3 @@ -- name: Apply non-parametric statistics with clustering on TFRs of power that were computed with BESA - link: /example/apply_clusterrandanalysis_on_tfrs_of_power_that_were_computed_with_besa - - name: Computing and reporting the effect size link: /example/effectsize @@ -19,17 +16,20 @@ - name: Using simulations to estimate the sample size for cluster-based permutation test link: /example/samplesize +- name: Use simulated ERPs to explore cluster statistics + link: /example/simulateddata_clusterstats + - name: Source statistics link: /example/source_statistics +- name: Apply non-parametric statistics with clustering on TFRs of power that were computed with BESA + link: /example/stats_besa + - name: Stratify the distribution of one variable that differs in two conditions link: /example/stratify - name: Using threshold-free cluster enhancement for cluster statistics - link: /example/threshold_free_cluster_enhancement - -- name: Use simulated ERPs to explore cluster statistics - link: /example/use_simulated_erps_to_explore_cluster_statistics + link: /example/tfce - name: How can I test whether a behavioral measure is phasic? link: /faq/behavior_cosinefit @@ -74,7 +74,7 @@ link: /reference - name: References to implemented methods - link: /references_to_implemented_methods + link: /references_methods - name: Cluster-based permutation tests on time-frequency data link: /tutorial/cluster_permutation_freq diff --git a/_data/tag/trialdef.yml b/_data/tag/trialdef.yml index 26800fb44..f5ebbc35e 100644 --- a/_data/tag/trialdef.yml +++ b/_data/tag/trialdef.yml @@ -1,5 +1,5 @@ - name: Getting started with reading raw EEG or MEG data - link: /example/getting_started_with_reading_raw_eeg_or_meg_data + link: /example/raw_meeg - name: Making your own trialfun for conditional trial definition link: /example/trialfun diff --git a/_data/tag/trialfun.yml b/_data/tag/trialfun.yml index 3062a8a47..5bfdff60f 100644 --- a/_data/tag/trialfun.yml +++ b/_data/tag/trialfun.yml @@ -1,5 +1,5 @@ - name: Detect the muscle activity in an EMG channel and use that as trial definition - link: /example/detect_the_muscle_activity_in_an_emg_channel_and_use_that_as_trial_definition + link: /example/trialdef_emg - name: Making your own trialfun for conditional trial definition link: /example/trialfun