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error when running run_rw.py #3

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zxhero opened this issue May 27, 2024 · 1 comment
Open

error when running run_rw.py #3

zxhero opened this issue May 27, 2024 · 1 comment

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@zxhero
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zxhero commented May 27, 2024

Hi,
I compiled and ran random work as wroten in README:
python3 engine/setup.py build_ext --build-lib=frontend
python3 frontend/run_rw.py --data_path ./data --num_roots 8192 --walk_length 15 --num_machines 4 --dataset ogbn-arxiv
There is no error reported compiling it:
image
but I got the following error running run_rw.py:
Traceback (most recent call last):
File "/home/zhangxu/applications/griphin/frontend/run_rw.py", line 17, in <module>
from graph import GraphDataManager
File "/home/zhangxu/applications/griphin/frontend/graph.py", line 11, in <module>
import graph_engine
ImportError: /home/zhangxu/applications/griphin/frontend/graph_engine.cpython-310-x86_64-linux-gnu.so: undefined symbol: GOMP_loop_maybe_nonmonotonic_runtime_next
I tried to add -lgomp into setup.py but the error remains.
I used g++ 11 and mpich on ubuntu 22.04
Could someone help me out? Thanks~

@Hydrapse
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I'm sorry for the late reply. It seems that there's a compatibility issue with your gcc and libgomp1. I suggest reinstalling them to solve this issue.

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