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Error opening MIMIC IV #33

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Shaydund opened this issue Jun 30, 2023 · 2 comments
Closed

Error opening MIMIC IV #33

Shaydund opened this issue Jun 30, 2023 · 2 comments

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@Shaydund
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I have an error opening MIMIC IV using RICU package.

The code i'm writting is the next:

remotes::install_github("eth-mds/ricu", dependencies = TRUE)

Sys.setenv(RICU_PHYSIONET_USER = "xxxxxx" ,
RICU_PHYSIONET_PASS = "xxxxxxx")
library(ricu)
download_src("miiv")

Error in stop_ricu():
! Access to the requested resource was denied. Please set up an
account at https://physionet.org/ and apply for data access.
Backtrace:

  1. ricu::download_src("miiv")
  2. ricu:::download_src.character("miiv")
  3. base::Map(...)
  4. base::mapply(FUN = f, ..., SIMPLIFY = FALSE)
  5. ricu:::download_src.src_cfg(...)
  6. ricu:::download_check_data(...)
  7. ricu:::get_sha256(url, user, pass)
  8. ricu:::download_pysionet_file(...)
  9. ricu:::stop_ricu(...)

###########################################
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I don't have problems with eicu_demo and mimic_demo.
I have the credentials of mimic IV
My computer pass the requirements.

Sure i'm doing something (stupid) wrong

@mlondschien
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Contributor

See here.

@dplecko
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dplecko commented Dec 29, 2023

MIMIC-IV (miiv in ricu) was bumped to v2.2 in ricu 0.6.0. It should solve the issue. If problems persist, feel free to open a new issue.

@dplecko dplecko closed this as completed Dec 29, 2023
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3 participants