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Version 0.9.12

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@etal etal released this 17 Nov 16:28

This is a bugfix release that addresses installation problems, an occasional issue with segmentation, and a command option that had been non-functional.

Fixes

  • Re-enable the coverage -q/--min-mapq option. It had stopped working at some point due to a type coercion issue. (#912; thanks @rach-kennedy)
  • Prevent CBS segmentation failures due to nulls in input .cnr. It's not clear what causes nulls to appear in .cnr files, but when they do, segmentation failed; this is happened silently in batch mode and could be difficult for user to triage when it happened. (#914, #436, #582, maybe #760, #896, #901 and nf-core/sarek#1625).
  • Raise max pomegranate dependency version from <=0.14.9 to <1.0.0 to avoid conflicts during installation. (#911, #890)

New Contributors

Full Changelog: v0.9.11...v0.9.12