Error in double(nm * nm) : vector size cannot be NA

[brmagalis]

I am not sure as to what "nm" (or the referenced vector) is referring to here. I read in the bootstrap-labeled tree using read.tree() and the dates file as a named vector (converting dates to decimals using lubridate::decimal_date()), as usual, but I have never received this error before. Any help would be appreciated.
issue.zip

[emvolz]

The tree might be a bit too much for treedater. I see more than 30k tips. I haven't been able to reproduce the error since it can't allocate the memory on my laptop. There are more scalable methods like least-squares-dating, or if there is a logical way to partition the data you can try that.

[brmagalis]

Ok, this is very good to know. Thank you!

…

On Apr 27, 2021, at 6:56 PM, Erik Volz ***@***.***> wrote:  The tree might be a bit too much for treedater. I see more than 30k tips. I haven't been able to reproduce the error since it can't allocate the memory on my laptop. There are more scalable methods like least-squares-dating, or if there is a logical way to partition the data you can try that. — You are receiving this because you authored the thread. Reply to this email directly, view it on GitHub, or unsubscribe.